Sinocyclocheilus rhinocerous: 107731044
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Entry
107731044 CDS
T04916
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03030
DNA replication
srx03410
Base excision repair
srx03420
Nucleotide excision repair
srx03430
Mismatch repair
srx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107731044
03410 Base excision repair
107731044
03420 Nucleotide excision repair
107731044
03430 Mismatch repair
107731044
03440 Homologous recombination
107731044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srx03032
]
107731044
03400 DNA repair and recombination proteins [BR:
srx03400
]
107731044
Enzymes [BR:
srx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107731044
DNA replication proteins [BR:
srx03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
107731044
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
107731044
MMR (mismatch excision repair)
DNA polymerase delta complex
107731044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
107731044
NCBI-ProteinID:
XP_016397511
UniProt:
A0A673JFI3
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPAMGGASQAKKGKMSTEWEDSPSQFEEELALFDEMEMEAESEEGQAGHDVI
PVGDLFSADLNPRWKRPHAPPLQPNSDTLIFQQIDLDYYLGSAVAGMPGQVQGKVPIVRM
FGVTDSGNSVCCHVHGFAPYFYVPAPNGFTNAHLAEFQRELNSAVLKDMRSNKDNIAVTV
LAVDITKKESMYHYHGNKPHDFLCITMAMPRLIAPAKRLLEQGFKFANFATQSYQAYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYRLREERSEGQTGSKYPGKVSLCQYEVDVAWNDLV
SHPAEEEWQRIAPLRVLSFDIECAGRKGVFPEPEIDPVIQIASMVQRQGEKEPFIRTVFT
LQSCASIVGSQILCFTQEKLLLQSWAEFVRTVDPDIITGYNIQNFDLPYLLNRAATLKVN
LFPYLGRVWGSKSVLKDSSFQSKQMGRRENKTVNMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVRTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKSQMEKLGLSPEDFIKTPTGDLFVKSSVRKGLL
PEILENLLSARKRAKAELKKETDPFKMQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQHVESKYTISNGYQADAKVIYGDTDSVMVKLGVATVQEAMNLGK
EAADWVSSYFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSNAEHHDKMDCKGIETVRRDN
CPLVANLINTCLQNILIDRDPDGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCR
AVLKTDVAVCDFCKKRESEFYQKEIAHLSTLEEKFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQEKLISRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaaaaggcgcaatggaggccctgcaatgggcggggcttcacaggccaagaag
gggaaaatgagcaccgaatgggaggatagtccctcccagtttgaagaggaactcgctcta
tttgatgaaatggaaatggaggcggagtcagaggagggccaggcaggtcatgatgtcatt
ccagtgggtgacttattctctgctgatcttaatccacgttggaaaagacctcatgcacct
cctcttcaaccaaactcagacacactaatatttcagcagatagacctggattactacttg
ggatccgcggtagcgggaatgcctgggcaggtacagggtaaagtgcccatagtgcgcatg
tttggtgtgacagacagtggaaatagcgtgtgctgccatgttcatggatttgccccgtat
ttctatgttcctgctcccaacggttttacaaatgcacacttggctgagtttcagagagag
ctgaactctgctgtattgaaggatatgcggtccaataaagacaacatagcggtcactgtg
ctggcagtggacatcaccaagaaggaaagtatgtatcattaccatggaaacaaacctcat
gactttctgtgcatcactatggcaatgccgcgtctgattgcccctgcgaagcgtcttctt
gagcagggctttaaatttgcaaacttcgccacccaaagctaccaggcttatgaagccaac
attgactttgagatcaggttcatggtggacagtgatgtggtcggttgctgctggattgag
cttcctaaagggaagtacaggctgagggaggagagaagtgaaggacagacaggctcaaaa
tatcccggaaaggtgtccctgtgtcagtacgaggtggatgtggcatggaatgacttggtc
agtcatccagctgaagaagaatggcagaggatcgctccactcagagtactgagctttgat
attgagtgtgctggcagaaaaggcgtgtttccagagccggagattgatcctgtgattcag
atcgcctctatggtgcagcgtcagggagagaaggagccgtttatccggacggtcttcacc
ttacagagctgtgccagtatagtgggctcccagattctctgctttactcaagagaaactg
ctactgcagagttgggctgagtttgtgaggacagtggatcctgatatcatcactggctac
aatatccagaactttgacctcccgtacctcctcaacagagctgcaaccttaaaggtgaat
ttgttcccatatctgggccgtgtgtggggcagtaaatcagtcctgaaagactccagcttc
cagagcaagcagatgggccgcagagagaacaaaacagtcaatatggagggacgtgtgcag
tttgacctactacaggtgttgctgagggattataaactacgctcttacacactaaacgcc
gtcagttttcattttctgcaggagcagaaggaggatgtgcagcattctatcatcacagac
ctacagaatgggaatgagcagacccgcaggcgtttggctgtgtactgtctgaaggatgcg
tatctgcccctgcgcttgctgcagaagttaatgtgcgtcattaattacatggaaatggcc
agagttactggggtgcccctgacctacctgctctctcgtggacagcagattaaagtggtt
tcacagctcctgagacaggctatgaagcaggatctggtgatgccagtggtgaggacggag
ggtggggaggactacactggagccactgtcatagaaccagagaaagggtattacagtgtt
cctatagcgactctggatttctcctcactgtatccctccatcatgatggctcataattta
tgttacactacactcctgcagaaaagccagatggagaaactcggtctttctccagaagat
ttcatcaagacccccacaggtgatctgtttgtgaagagctctgtgaggaagggccttctc
cctgagatcctggaaaacctgctgagtgccaggaaaagagcaaaggcagagctgaagaaa
gagacagacccctttaaaatgcaggtgctggatggaaggcagttggctttgaagatcagt
gcaaactccgtgtacgggttcactggggctcaggtgggcaaactgccctgtctggagata
tcacagagcgtcacaggctttggtaggcagatgattgaacagaccaaacagcatgtggaa
tcaaaatacacgatctctaatggttaccaggcagatgcaaaggtcatctacggagacaca
gactctgtgatggtgaaactaggtgtggccacagtgcaggaagcaatgaatctgggaaag
gaggcagctgattgggtctcctcctactttgttccaccaatcaaattagagtttgagaag
gtgtattacccatatctgttgatcaataagaagcggtacgccgggttgtatttctcttct
aatgctgaacatcatgataagatggactgcaaaggaattgagacggtcagacgagacaac
tgccctctagtggccaaccttatcaacacatgcctccaaaacatcctcattgacagagac
cctgatggggcagtagctcatgctaaagaggtgatctctgaccttctgtgcaaccgcatt
gacatcagtcagctggtcataactaaagagctcacacgcaccgcacaggagtatgccggc
aaacaggcccacgttgagctagctgagaggatgcggaagcgtgatgcaggtagcgctcca
aacctcggagacagagtcccgtacgtcatcatcaaagcagcaaagggagtggcagcatat
atgaaatcagaggaccccatttatgtgctggagaacaacatccctatagacacacagtac
tatctggagcagcagctgtccaaacctttactgcgcatctttgaacccatactgggcgag
agcaaagctgagagtgtgttgctgaagggcgatcacacacgctgtaagacggtcttgaca
tctagagttggtggtctcatggctttcgctcagaaacgaagcacttgcattggctgccga
gctgtgctcaaaaccgatgtggctgtatgcgacttctgcaaaaagagagagtcggagttt
tatcagaaagagatcgctcatctgtcaactctagaggagaaattctctcgtctgtggact
cagtgtcagcgctgtcaaggttcactgcatgaagacgtgctgtgtaccagtcgagactgc
cccatcttttacatgaggaagaaggtgcagaaggatttagatgatcaggagaagctcatc
tcccgtttcggttggtga
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integrated database retrieval system
