Sinocyclocheilus rhinocerous: 107731244 Help Entry 107731244         CDS       T04916                                  Name (RefSeq) collagen alpha-1(II) chain-like   KO K19719   collagen type II alpha Organism srx  Sinocyclocheilus rhinocerous Pathway srx04510   Focal adhesion srx04512   ECM-receptor interaction srx04518   Integrin signaling Brite KEGG Orthology (KO) [BR:srx00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107731244    04518 Integrin signaling     107731244  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     107731244  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:srx00536]     107731244 Glycosaminoglycan binding proteins [BR:srx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107731244 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  107731244 NCBI-ProteinID:  XP_016397760 LinkDB All DBs Position Unknown AA seq 1491 aa AA seqDB search MFKLVDSRSLLLLVATHCVLLSLVRCQQEDDQEDFGSCIQDGQQYADHAVWKPEACRVCV CDAGAVLCDEVICEDLRDCANPIIPPGECCPICPADTDEPIGSLGAKGQKGEPGDIADVV GPRGPAGPMGPPGEQGPRGEKGPKGEKGNLGPRGRDGEPGTPGNPGPPGPPGPNGPPGLG GNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEAGEPGPA GPLGPRGPSGPPGKPGSDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGIKGHRGHPGLD GAKGEAGAAGAKGESGTNGESGAPGPMGPRGLPGERGRSGPPGTAGARGNDGLPGPAGPP GPVGPAGAPGFPGSPGAKGEAGPTGARGPEGAQGPRGEAGTPGSPGPAGASGNPGTDGIP GAKGSAGASGIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGIPGFKGEAGPKGERGVA GPQGAPGPSGEEGKRGPRGEPGSAGPLGPPGERGAPGNRGFPGQDGLLGAKGAPGDRGVP GVTGPKGGTGDPGRTGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPLGAR GQPGVMGFPGPKGANGEPGKPGEKGLVGHTGLRGLPGKDGEIGAAGPPGPAGLAGERGEQ GQPGPSGFQGLPGPTGAPGEPGKPGDQGVPGEGGAAGPTGPRGERGFPGERGGAGPQGLQ GPRGLPGTPGTDGPKGAIGPAGAAGAQGPPGLQGMPGERGAVGIPGAKGDRGDSGEKGPE GASGKDGARGLTGPIGPPGPSGPNGAKGETGPIGSIGASGARGAPGDRGEIGAPGPAGFA GPPGADGQPGIKGEQGESGQKGEAGSLGPQGPSGAPGPVGPTGVTGPKGARGAQGAPGAT GFPGAAGRVGSPGPNGNPGPAGPAGAAGKDGPKGVRGDAGPPGRAGDAGLRGPSGAPGEK GEPGEDGPSGPDGPSGPAGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGASGSSGDR GPPGPVGPPGLTGPAGETGREGNPGSDGPPGRDGASGVKGERGNTGPIGAPGAPGALGAS GPVGPIGKQGDRGENGPQGPAGSPGPAGARGMVGPQGPRGDKGEAGEAGERGQKGHRGFT GLQGLPGPPGAPGDQGTAGPSGPSGAKGPAGPVGPAGKDGTNGQPGPIGPSGPRGRSGES GPIGPPGNSGPPGPPGPPGPGIDMSAFAGLSQLEKGPDPLRYMRADEASSSLRQHDVEVD ATLKSINSQIEDIRSPDGSRKNPAHSCRDLKLCHPEWKSGDYWVDPNLGCAADAIKVFCN METGETCVKPSTPKIPRKNWWSSKSKAQKHVWFGESMNGGFHFSYADSSQTPSTTSIQLN FLRLLSTEATQTITYHCKNSVAYMDQATGNLKKAVLLQGSNDVEIRAEGNSRFTYGVLED GCKKHTGQWAKTVIEYKTQKTSRLPIVDIAPMDIGGADQEFGVDIGAVCFL NT seq 4476 nt NT seq  +upstreamnt  +downstreamnt atgttcaaattagtggattcacggagtctcctgctacttgtagcaacgcattgcgtgttg ctatcccttgtaagatgtcaacaagaagatgaccaggaagactttggcagctgcatccaa gatggccagcagtatgcagaccatgcagtatggaagccagaagcatgccgtgtctgtgtg tgcgatgcaggggcagtgctatgtgacgaggtcatctgtgaggacctgagagactgtgcc aatcccatcattccacctggagagtgctgtcccatctgcccagctgacaccgacgaacct atcgggtcacttggtgcaaagggacagaaaggagaaccaggcgatattgcagatgttgta ggaccaagaggacctgctggcccaatgggacctccaggagagcagggaccacgtggcgag aaaggacctaagggtgagaagggaaatctcggcccaagagggagagatggcgaacctggt acacctggaaacccaggaccccctggaccaccaggacctaatggtccccctggacttgga ggaaactttgctgctcagatggctggtggttttgatgagaaggcaggaggtgctcagatg ggtgtgatgcagggaccaatgggtccaatgggtccccgtggtcctcccggcccttctgga gcacctggcccacaaggtttccagggcaaccctggagaggctggtgaacccggccctgct ggtcctcttggaccccgtggcccttctggaccccctggaaaacccggaagtgatggtgag gctggcaaacctggtaagtctggcgagcgtggacccccagggcctcagggagcccgtgga ttccccgggacccctggccttcctggcatcaagggacacagaggacacccaggtcttgat ggagctaaaggagaggccggtgctgcaggtgctaagggtgaatctggtactaatggtgag agcggtgctcctggaccaatgggtccacgtggtctgcccggtgagagaggtcgttctgga cctcctggtactgctggtgcccgtggtaatgatggtctgcctggtcctgctggtcctcct ggccctgttggtcctgctggtgctccaggtttcccaggatcccctggtgctaagggtgaa gctggtcccactggagctcgtggacctgagggcgcacaaggaccccgtggagaggccggt acacctggatcacctggacccgccggtgcatctggtaaccctggtactgatggtattcct ggtgccaaaggatctgctggtgcttctggcattgctggtgcccctggtttcccaggaccc cgtggcccgccaggacctcagggagctactggacctcttgggcctaaaggacaatctgga gaccctggtatcccaggatttaaaggcgaggctggacccaagggagagcgtggtgttgca ggacctcagggtgcccctgggccatctggagaggaaggcaagagaggaccaagaggagag cctggttctgccggacctcttggacctcctggagaaagaggagctccaggtaaccgtggg ttccctggtcaggatggtctattaggagcaaagggcgcacctggtgatcgtggtgttcct ggtgtgaccggcccgaaaggaggaactggagatcctggtcgcacaggcgagcctggtctt cctggagccagaggtctcactgggcgccctggtgatgctggacctcaaggaaaagttgga ccatctggtgcctctggtgaagatggacgccctggtcctcctgggcctctgggagctcgt ggtcagcctggagtgatgggattccctggacctaagggagccaatggtgaacctggaaaa cctggagagaaaggacttgttggacacactggtcttagaggtttgcctggtaaagatgga gagattggagctgctggtccacctggccctgctggtctagctggtgagagaggagagcag ggtcagcctggtccatctggcttccagggtcttccaggacctactggagcccccggagag cctggtaaacctggtgaccagggtgttcctggagagggtggtgctgctggtcccactgga ccaagaggtgaacgtggtttccctggtgagagaggaggagccggccctcagggtctccag ggaccaagaggacttccaggaactcccggtactgatggacctaagggtgcaattggacca gctggtgctgctggagctcagggccctcctggtctgcagggcatgcctggtgagagagga gctgttggaatccctggagctaaaggtgacaggggtgacagcggagagaaaggacctgaa ggtgcttctggcaaagatggtgcaagaggtttaactggtccaattggtccacctggtcct tctggtcccaatggcgctaagggtgaaactggtcccattggctcaattggtgcttctggt gctcgtggtgcccctggcgatcgtggtgagattggtgcacccggacctgctggctttgct ggacctcctggtgctgatggccagcctggaattaagggagagcagggtgagtcaggacag aaaggtgaggctggatcccttggaccccaagggccatcaggagcacccggcccagtgggc ccaactggtgttacaggacctaagggagcacgtggagcccaaggagcccctggtgccact ggttttccaggtgctgcaggaagagttggatcacctggccccaatggtaaccctggtcct gctggccctgcaggtgctgctggtaaagatggtcctaagggagttcgtggtgatgccggt cccccaggcagagcaggagatgctggactgcgtggaccttctggtgctcctggagagaag ggagagcctggagaggatggtccttctggtcctgatggtccttccggccctgctggtctt gctggtcagcgtggtattgttggtttgcctggtcagcgtggtgaaagaggtttcccagga cttccaggaccctctggtgagcctggcaaacagggagcttctggctcttctggtgaccgt ggaccccctggccctgttggacctcctggattgactggacctgctggagagactggacgt gagggtaatcctggatctgatggtccacctggtagagatggtgcttctggtgtgaagggt gagcgtggtaacactggcccaatcggtgctcctggagctcctggtgcgcttggtgcttct ggtcccgttggtccaattggcaaacagggagacagaggagagaatggcccacaaggacct gctggatcacctggacccgctggagctagaggcatggttggaccccaaggacctcgtggt gataagggtgaggcaggagaagctggagaaagaggtcagaagggacacagaggattcacc ggtctgcagggtctgcctggacctcctggtgctcctggagaccagggtactgctggacct tctggaccaagtggtgctaaaggacctgcaggacctgttggaccagctggtaaggacggt actaatggtcagcctggacccattggaccatctggacctcgtggacgctctggagagtct ggcccaattggtccacctggtaactctggaccccctggtcctcctggtccccctggccct ggcattgacatgtctgccttcgctgggttgtctcagctcgagaagggacccgatcctctg cgttacatgcgtgccgacgaggcctccagctctcttagacaacatgatgtggaggtggac gccacactgaaatcaatcaacagccagatcgaggacatccgcagcccagatggctcccgc aagaaccctgcgcactcctgccgagacctgaaactctgccaccctgaatggaagagcggt gactactgggtggatcctaaccttggttgcgctgctgatgccatcaaagttttctgcaac atggagaccggagagacctgtgtgaagcccagcactcccaaaatcccacgcaagaactgg tggagcagcaagagcaaggcgcagaagcacgtgtggtttggagagagcatgaacggtgga ttccacttcagctatgctgatagcagccagactcctagtactaccagcatccagctgaac ttcctgagactgctgtctactgaggccactcagaccatcacctaccactgcaagaacagc gttgcttacatggaccaagccacaggcaacctgaagaaggccgttctgctgcagggctcc aatgatgtggagatcagagcagagggcaacagccgctttacatatggtgtacttgaggat ggctgcaagaagcacacaggtcagtgggccaagactgtgattgagtacaaaactcagaag acatccaggctgcccatcgtggacattgctcccatggacatcggaggagcagatcaggag tttggagtggacattggtgcagtctgcttcttgtaa

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