Sinocyclocheilus rhinocerous: 107731267
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Entry
107731267 CDS
T04916
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107731267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107731267
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
Pre-60S particles
RNases
107731267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
107731267
NCBI-ProteinID:
XP_016397793
UniProt:
A0A673HQE8
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MLRSTGFFRGIDCPFYCERNKGKAGVDGCTRPYCHFRHSKQRRGSSGIYDIKKTKALSAS
PNEQGYDPFSPEVVRPGEHYNGEPPSSLSTGQDVDLGTMELELVNRAIEAVRNEMERDKK
KLSRIGDQEYEPTTSSVKRPKPTASSHQGYDPGSYQMGQASEYTPSPRSSKYTLDSENSS
ANALEYVPTAVSKTSIKKALSPPPSRVKCKYTLDNSKPTSDMEYDPLSNYSAKPTVKEQR
TLCSEGEGRKRFYPEKQGEDEEYVPTAKKPRSTLPKADVPKYTASFSESDEESSGTEYRP
TSISRMQLKGISISLKQEQVSGVKGQQRNQVSKTYDVFSQSESDDVESQDVDWTDKKMPV
SQLKNIKYDKLKKEEQESNKKTQKERQESSSADKTSKNSSQKDKNQSKSEDRVSKSKEKL
RKDGTKLKSTEEKNKKIVKIKNEHSHKEKDRGSGDIKKPKMDKPVKTNKVSSKIKDHKNG
KLESSTKDKDKKKSSHGSSSSTKDKSKKSSSVVDPKEASEAKQRNLSHIDLFGAESAEED
EEDERIVRKSASAFKRGSLMKNKRKTSEDTSSSSEDDSEVDDDDDGGGDEAVDYSCLQDE
MEYDSDPMEECLRIFNESKEVKTEDKGRQAKQPSREQEEVEEEETESTLTTLFPGQKKRV
SHFKAQGKSESSLNAVPMLQRRMTAQEICYQRIQKAQQQAVQLAAAVKAVSASTNPKLGL
SGEKRRVAHRPNASLPSSKPGLADASSRVLSPTRVATDQLLVKAHTSTGILSKTTSTTVQ
KRVAHTPTMKSSAMKRPVIPAEFGAKVPTNVRQRYLNIFIDECLKFCSSEQQAFQMALEE
EKVVYDRSSSKNIYLNVAVNTLKKLRSKSTPTSPVIKSPAVSVNRKSQSHEGVLGGRLAA
TTSYTINRSGKQQDVDPKGAILYKKQKKYAMTEEQLQEHGYPRPHPEMSGHAVVHNLPEK
KNNDPFSKICCRCGAEYKINANGSCVRKEECSHHWGRLRRNRVPGGWETLYSCCSGAVGS
PGCEVCKQHVQDGRKESLDGFVKTFSKPLPVDGNGGVYALDCEMCYTKQGLELTRVTVIN
SDLKVIYDTFVKPGSKVVDYNTRFSGVTQDDLENTTITLRDVQAVLLSMFSAESILIGHS
LESDLFALKLIHSMVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDSVGGHDSSEDAR
ACMELMIWKIKEDAKVKR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatctacggggttctttcgtgggattgactgcccgttttattgtgagcgtaat
aagggaaaagccggtgtagatgggtgcaccagaccctactgtcacttcagacacagcaaa
caaagacgaggctcctctgggatatacgacatcaaaaagactaaagcgctttctgcgagt
ccaaacgagcaaggatatgatccattcagtccagaggttgtaagaccgggtgaacattat
aatggggagccaccgtcgagcctgtcgacgggacaggatgtggacctgggcaccatggag
ctggagttggtcaatcgggccattgaggctgttcgcaatgagatggaaagggacaagaag
aagctttctcggatcggcgatcaggaatatgagccgaccacaagctctgttaagagaccg
aaacccactgcatcatcccatcagggctacgatcctgggagctatcaaatgggccaagct
agtgaatacaccccatcccctcgctccagcaaatacactttggactccgagaacagcagt
gccaatgcactggaatatgtgcccactgctgtctccaaaacaagcattaaaaaggcatta
tctccaccaccgtcccgtgtaaagtgtaaatacactctggataattccaaaccaacctca
gacatggagtacgaccctctctcgaactattcagctaagccgactgttaaagaacagagg
actttgtgttcagagggagaggggagaaagaggttttaccctgaaaaacaaggggaagat
gaggaatacgttccaacggcgaagaaacctaggtcgacgttacctaaggcagatgtcccg
aagtacactgcaagtttctctgaatctgatgaggaaagttctgggacagagtatcgcccg
acatccataagccgaatgcagctgaagggaatcagcatcagcttaaaacaggaacaagtg
tcaggtgtgaagggacagcaaagaaatcaggtgtctaaaacttacgatgttttctcacag
agcgaatcagatgatgtggagtcccaggatgtagactggacagacaaaaagatgcctgtg
agtcagttgaaaaatataaaatatgataaactgaaaaaagaggagcaagaatccaataag
aagactcaaaaagaaaggcaggaaagttcaagtgcagacaagacatcgaagaattctagt
caaaaagacaagaaccaaagtaaaagtgaggacagagtcagtaagtccaaggaaaagctg
cggaaagacggaacgaagttaaagagtactgaggaaaagaacaagaagatagttaagata
aagaatgaacatagccacaaggaaaaagatagaggaagtggcgacatcaagaagcccaaa
atggacaagcctgtgaaaaccaataaggtgtcatccaaaatcaaagaccataagaatgga
aaacttgagagtagcacaaaggacaaggacaaaaagaaaagcagccatgggagcagcagc
agcactaaagacaaaagcaaaaaaagcagctcagttgttgatcccaaagaggcaagtgag
gccaaacagaggaatctgagccacattgacttgttcggtgctgagagtgctgaagaggat
gaggaagacgagaggatagtgaggaagtcagcttctgcttttaaacggggcagccttatg
aagaataagaggaaaacgtctgaagatacatcatcatcatcggaggatgactctgaagtg
gatgatgacgatgatggtggtggtgatgaagcagtggactactcctgtctgcaggatgag
atggagtatgactcagacccgatggaggagtgtctgcggatatttaacgaatccaaagag
gtgaagacggaagataaagggagacaagctaagcagccttcaagggaacaggaggaggtg
gaggaggaagaaacagaaagcactttaactactctctttcctggccagaagaagagggtg
tcacactttaaagctcaaggaaagtccgagtcatcactgaacgctgtgccgatgctgcag
cggagaatgacagcgcaggagatctgttaccagcgcatacagaaggcccagcaacaggca
gtacagctagctgctgcagtaaaggcagtgtctgcatcgaccaacccaaaactggggctc
tctggagagaaacggcgggtggcacaccggccaaacgcctccttgccctcctcaaagcct
gggctagctgatgccagcagtcgggtgttgtcacccaccagggtggcgaccgatcagctt
ttagtcaaagctcatacatcgacaggcatcctgtcaaagaccacatccactacagtgcag
aaaagagtggcgcacacccccaccatgaagagctctgccatgaagcgtcctgtcattcct
gcagaatttggggccaaggtacccactaatgtccgccagcgttacctaaacatcttcatt
gatgagtgcctgaagttttgttcctctgaacagcaagcttttcagatggctctggaggaa
gagaaggtggtgtatgacaggagcagcagtaagaacatctacctgaatgtagccgtgaac
acactgaagaaacttcgcagcaagagcacacctacgtctcctgtcatcaagagcccagct
gtatctgtgaatagaaagtctcagtcccatgaaggagtacttggtggaagacttgctgcc
acaaccagctacacaatcaaccgctccggtaaacagcaggatgtggaccctaaaggcgcc
attctttacaaaaaacagaaaaaatatgcaatgactgaagaacagctgcaggagcatggc
taccccagacctcaccccgagatgtcgggtcacgctgttgtccataacctcccagagaag
aaaaacaatgaccctttttccaaaatctgttgtcgatgtggtgccgagtacaagataaac
gctaatggcagctgtgtgcgtaaggaggagtgcagtcaccactggggaagattacgcaga
aacagagttccaggaggttgggagacactttacagctgctgctctggtgcggttggttct
cctggatgtgaagtgtgtaaacaacatgtacaagatggccgtaaagagtccttggatggt
tttgtgaagacttttagcaaaccgttgccagtagatggaaatggaggtgtctatgccttg
gactgtgagatgtgctacacaaagcaaggtttggagctgaccagagtgaccgtcattaac
tctgacctcaaggttatttatgacacatttgtcaagccaggcagcaaagtggtggattac
aacacacggttttcaggtgtgacacaggatgatctggagaacaccaccatcaccctgaga
gatgtgcaggcggtgctgctgagcatgttcagtgcagagtccattctaattggacacagt
cttgagagtgacctgtttgcgctcaagcttattcacagcatggttgtggacaccgctatt
gtgtttcctcaccgcctgggtctgccctacaaacgtgccctgcgaaaccttatggccgac
tacctcaaacgcattatacaagacagcgttggagggcacgactccagtgaagatgcccgg
gcctgcatggaactcatgatctggaagatcaaagaggatgccaaggtgaagagatga
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integrated database retrieval system
