Sinocyclocheilus rhinocerous: 107731380
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Entry
107731380 CDS
T04916
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03420
Nucleotide excision repair
srx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107731380 (ercc4)
03460 Fanconi anemia pathway
107731380 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srx03032
]
107731380 (ercc4)
03400 DNA repair and recombination proteins [BR:
srx03400
]
107731380 (ercc4)
DNA replication proteins [BR:
srx03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107731380 (ercc4)
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
107731380 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
AmiA-like
Motif
Other DBs
NCBI-GeneID:
107731380
NCBI-ProteinID:
XP_016397922
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
FGNNDESCDEYVCLLKEYFTEQLRAEGVSHLPQTVTSDVHSNERYDVYTKGGVLFVTSRI
LVVDFLTDRIPAHLVTGILVYRAHKIIESCQEAFILRLYRQKNKTGFIKAFTDKATSFSS
GFCKVERVMRNLFVKKLFLWPRFQASVNTTLDKHKPYVVELHVSQTPAMRAIQSSILDIM
NACLKELKRYNPTLEAEDLSLENSLGTSFEKTIRHYLDPLWHQLGSRTKSLVQDLKILRT
LLLYLTQYDCVTFLNLLESLRTSQKSFGSNSGWLFLDSSTSMFVNARSRVYRIQESKKKL
KVGETDQKQSALAPPKRELVLEKNPKWEALTEVLQEIEKENSSSEHEPGRVLICASNDRA
CAQLKEYIQKGAEHLLNRLYSRTVGKEDPQPDLLKLDKGWAKKDSVRSKGKKTKTNSKKP
TKIERPSRVSQMQRQEDGAEKDLIGNSEDEGGLAEEEEEEEEILLDLSSDDYYGILKEPL
TVIHPLKGCSDPYSLTRVLHEVDPMFVVLYDAELSFVRQLEIYKASRPGKPLRVYFLIYG
GSTEEQRYLTVLSKEKQAFEYLIREKASMVVPEEREGREDTNLDLVRSHELASAATSTRK
AGGRQEVKEPQRIIVDMREFRSELPSLLHQRGLDIEPVTLEVGDYILTSEICVERKSISD
LIGSLQSGRLYTQCLSMTRFYRRPVLLIEFDPAKPFSLVARSDFRQEISASDVTSKLTLL
TLHFPRLRLLWCPSPYMTAELFQELKHSRPEPDAATAQAVTAESETVTESADLYNPGPYD
FLLRMPGVNVKNFKSLIKHASCLTDLITFSQEKLSELLGSSSNARQLYEFIHNPTNIVPV
QKNK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
ttcggtaataatgatgaaagttgtgatgaatatgtgtgcctgttgaaggagtattttaca
gagcagctccgtgctgaaggggtgagccatcttccccagactgtgaccagtgatgtgcat
agtaatgaaagatatgatgtgtacactaaaggaggagttctctttgtgactagccgcatc
ctagtggtggacttccttacggacagaattcctgctcacctcgtaacaggaatcctggtg
tatcgtgcgcataagatcattgagtcttgtcaggaggctttcattctgagactttatcgg
cagaaaaacaagaccgggttcatcaaggcctttacggacaaagccacatccttctcttct
ggcttctgtaaagtcgagcgtgtcatgagaaacctgtttgtgaagaagctctttctttgg
ccaagatttcaagcatcagtaaacacgacgttggacaaacacaagccgtatgtggtggag
ctgcatgtgtctcagactccagcgatgagagccattcagagctctattctggacatcatg
aacgcctgcttgaaagagctgaagcgctacaatcccactctggaagcagaagacctctct
ctggagaacagcctgggcacttcctttgagaaaacaattcgtcattatcttgacccactg
tggcatcagctggggtccaggaccaaatctctcgttcaagacctgaagattttaagaacc
cttcttctctacctcactcaatacgactgtgtcaccttcctcaatctgctggagtctttg
agaaccagccagaaaagcttcggtagtaattcaggctggttattcttggactcaagcaca
tcaatgtttgtaaatgctcgcagccgcgtgtatcgcattcaggagtcaaagaagaaactg
aaagttggagagactgaccagaaacaaagtgccctggcccctccaaaaagagagcttgtg
cttgagaaaaacccaaagtgggaagctctaacagaggtgctacaggagattgagaaagaa
aacagcagctctgagcatgaaccaggccgtgtgttgatatgtgccagtaatgacagagca
tgtgcccagcttaaggaatatatccaaaaaggagcagaacaccttctgaatcgcctttat
tcacgcactgttggaaaagaagatcctcagcctgatctactgaagctcgacaaaggctgg
gcaaagaaggattctgttaggagcaaagggaagaaaaccaaaaccaactcaaaaaagcca
acaaagatcgagagaccgtcaagagtctctcagatgcagaggcaggaagatggagctgaa
aaggacctcattgggaacagtgaagatgaaggagggttggctgaagaggaagaggaagaa
gaagagattcttcttgatctttcttccgatgactactatggcattcttaaagagccattg
actgtcattcacccattgaagggatgcagtgacccctacagtttgacacgggtgttacat
gaggttgaccccatgtttgttgttttgtatgatgcagaactcagttttgtgcggcagctt
gaaatttataaagccagcaggccaggaaaacctcttcgtgtgtattttcttatatatgga
ggctcaacagaagaacagaggtatcttacagtcttgagcaaagagaaacaagcattcgag
tacctcataagggaaaaggccagcatggttgtgccagaagagagagagggtagggaagac
accaacctagatcttgtccgcagtcatgaacttgccagtgccgccaccagcacccgcaaa
gcagggggtcgtcaagaggttaaagagcctcagcgaatcatagttgacatgcgggagttt
cggagtgagcttccttcccttctgcatcaacggggtctcgacattgaaccagtcacctta
gaggttggcgactacatactgacttctgagatctgcgtagagcgcaaaagtatcagcgac
ctcattggttccctgcagagtgggcgtctctacacacagtgcctctctatgactcgattc
tatcgccgtcccgtgctgcttatcgagtttgaccccgcaaagcctttctccctggtggcc
cgcagtgactttcgtcaggagatctctgctagtgacgtcacctccaaactgaccctcctc
accctccatttcccccgcctgaggctgctctggtgcccgtctccctatatgacagcagag
ctgtttcaggagctcaaacacagccgcccggagcccgacgctgccacagctcaggccgtt
actgccgaatccgagaccgtgacggagtcagcagacctgtacaaccccggaccttacgac
ttcttgctccgtatgcctggagtcaatgtgaaaaacttcaagagccttataaaacatgct
tcctgtctgactgatcttataacatttagtcaggaaaagctcagtgagttattgggcagt
agcagcaacgccaggcagctttatgaattcatacacaatcccacgaacatagtgcctgtt
cagaaaaacaagtag
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