Sinocyclocheilus rhinocerous: 107731801
Help
Entry
107731801 CDS
T04916
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107731801 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107731801 (atrx)
03036 Chromosome and associated proteins [BR:
srx03036
]
107731801 (atrx)
Transcription factors [BR:
srx03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
107731801 (atrx)
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107731801 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATRX_C
SNF2-rel_dom
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
107731801
NCBI-ProteinID:
XP_016398465
LinkDB
All DBs
Position
Unknown
AA seq
1857 aa
AA seq
DB search
MTTDICRSSKLNTLVTKLHEFLGHSPDHESVDSQDISNGNMADRDSNIPDERMNEPGCSS
EMTKPSSSRSKRKPSFVTKHTAVEESECANESAGEHGTDESMQSSLDISKLPQGTVVVKP
EPVANEAKDEFRGPEFRSRGSKVKEDGARKRPDERLKEIFNCTACGQQVNHFQRDSVLQH
PALHVLICKSCFKYYMSDDISKDEDGMDEQCRWCAEGGNLMCCDYCSNAFCKKCVLRNLG
RKELSEIMNEESKWHCYVCRPEPLQDFVKTCEKVLLNLESSYRKPKGDGDKTKREDRKHK
HGKREKTAVNGQDYASDGAGSLSFSCKTLTVPKELVKKTKKLIETTNGLNRTFVQFLQHT
SKGREVGAVSNRHLKAFKSVLADLKKAHVALEESLEKEFESKGLKFQNGEEQRPAHSQTD
HTVVNSDPAPVREDGLDCTAKDQDENQQESNSADVEMKESLPPSPEEPQDRSEESEAQEM
ADNPDFEENPVPSGEASLDKDIVSIPPSVPEELFEMVESLAVKKEDRDDSNSTGSSDWKS
TSNAGVVESNKSLTKLGRKLVVKLTPVPLKITIKRDKSQEQSPSEDLPKEAQDSRRSPRM
KTTPLRKSPEAKNKRKPRSSRAKEERSDAVKEQCDSDSDEVPEVLQTAALKASSDESEPE
NASGKGTKKKKVASRSAEKAKAKPKRKLDMGSSDSEQSGKSSTANKRRAKKKKGRESDSS
NHNSDLEKQMKSLSKIGSGKKTSKGVKKEESESSKEGKKGPKRSFERKRRSQKEKAKTKE
EFSSSDEEQEEEEQAANSDEDSDQQKIKPILESVMASIDGFHQSSGDEIELKAESSQVVD
DDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDGDSPKKGKDGAKKQDESEEED
ETSDSGSDVDVKKGGRRHRLLSKKLTLSEGDSDDETPVKNKKETKKRGKRKVDSDDSADS
DFEQSRSGSSDASALSETVSEDADEDKSNKRKTRNTVLNWLNEFEKWQEGLKDEESLEVT
ELATVKRPQERAYALQRWQEDGGVMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPD
FVICDEGHVLKNEASAVSKAMNSITTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVK
EFRNRFINPIQNGQCADSTLTDVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYV
LAIRLTPIQCKLYRYYLDHFTVKWFSGVIAQAAIVLKQLRSWERKNGSWHQAAGRSEPIP
TSLSNEELALHIFHCVFIIKVIPVINTRHSFSPLLWGYFDEDSMEEFIASETEESSMSLT
SEDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEVRPSNS
GPGSPSPDWYKEFVTEPDSEVLEHSGKMVLLFEILRMAEELEEKVLVFSQSLISLDLIED
FLELAGKAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNAVTRKKWAEDFNDTSNVRGRLFL
ISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVKTVFVYRFLAQGTMEEK
IYDRQIAKQSLSFRVVDQQQIERHFTMNELTELYAFEPDQLDDPSEKKSKRATPMLPKDP
FLAELLHSYKDHIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRFNQPSYS
QMGMGAGPNSYFPFNVAALASMSNQQLEDLINQGRLKVLEATNALKSVPREPLEDIIAQV
WKENPSLPEAQVQSMALGRQAGYELEIKHREAIYRDVLGKQQTLMMYVQKVISNRKVQEQ
QLAMARQGLLLNQLAMQNGLTGPINQMDLLGLYQQLGALQGLPSSQLGKNPGPSKGL
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacatctgcaggtccagtaagttgaatacattggtgactaaacttcatgag
ttcttgggtcattctccagaccacgaaagcgttgattctcaagacatttccaatggtaat
atggccgatcgtgactcaaacatccctgacgagagaatgaatgagcctggttgctcctca
gaaatgaccaaaccctcatcttcacgctcaaagagaaaaccttcatttgtgaccaagcac
actgctgtagaggagtctgaatgtgcgaatgagagtgcaggtgaacacggcacagatgag
agcatgcagagcagtctggatatcagcaagctgccgcaaggcacagtggtggtcaagccg
gaaccggttgctaacgaagctaaagatgaattccgcggccccgagtttcgtagcagagga
agtaaagtgaaagaggacggtgctcggaaacgtcccgacgagcggctcaaggagattttt
aattgcacagcatgtggacagcaagtcaatcactttcagagagattctgtgcttcaacat
cccgcactacatgttcttatctgcaagtcatgtttcaaatattatatgagtgacgatatc
agcaaggatgaagatggaatggatgagcaatgcaggtggtgtgcagaggggggtaatctg
atgtgctgtgactactgcagcaatgccttctgcaaaaagtgcgttttgaggaaccttgga
cgaaaagagctgtctgaaatcatgaatgaagaaagcaaatggcactgctatgtgtgccgt
ccagagccgctgcaggactttgttaaaacctgtgagaaagttttgctcaatctggaatcg
tcttatagaaagcccaagggagacggtgacaagacgaagcgcgaagatcgtaaacacaag
catggcaaacgagaaaaaactgctgtaaatggacaggattacgcctccgatggagcggga
tcgttatccttttcctgtaagacgttgacggttccgaaagagctcgtcaagaagaccaaa
aaactcatcgagaccacaaacggtttgaatcgtacttttgtacaattcctccagcacacg
tcaaaaggccgtgaagttggcgccgtaagtaatagacacttaaaggccttcaaatcggtt
ttggccgatctgaaaaaggcccacgtggctctggaggaatcactcgaaaaagaatttgaa
tcgaaaggcctcaagtttcaaaacggagaggagcaaagaccggcacacagtcaaacagat
cataccgttgttaactctgaccctgctcctgtcagagaagatggtttggattgcaccgcc
aaggaccaagatgaaaaccaacaggaaagtaactcagctgatgttgaaatgaaggagagc
cttccaccctctccagaagaacctcaggatcggtctgaagaaagtgaagctcaagaaatg
gcagataaccctgactttgaggaaaacccagtaccatctggggaagcgtctcttgataaa
gacatcgtgtctattccaccgtctgtcccagaggagctctttgagatggtcgagagtctt
gcggtaaagaaagaagaccgtgacgatagcaactcgactggttccagtgattggaaatca
acgtccaatgctggggttgtggaatccaataagagccttacaaaactgggtagaaaactt
gttgtcaaactaacacctgttcctcttaaaatcaccataaaacgagataagagccaagaa
cagtcgccttcagaagacttgccaaaggaagctcaagatagcagacgctcccccaggatg
aagaccacaccgctgcgcaagtcaccagaggcgaagaacaaacgcaaaccgaggtcgtca
agggctaaagaagagcgcagcgacgcagtcaaggagcagtgcgattcagactcagatgaa
gtccctgaggtcctacagacggctgccttaaaggccagctctgatgagagcgaacccgag
aatgcttctggaaaaggtaccaagaagaagaaggtagcttcccgctctgctgagaaagca
aaagcgaagccaaagcgtaaactcgatatgggctcctcggattcagaacagagtggcaag
tcatcaacagcaaacaaaaggagggccaaaaaaaagaagggcagagaatctgactcctcg
aaccacaactctgatcttgagaaacagatgaaaagcctgtccaagatcggcagtgggaaa
aaaacatccaaaggtgtcaaaaaggaagagagtgaatccagtaaagagggcaagaaaggc
cctaaaaggtcatttgagaggaaacggcggtcacagaaagaaaaggctaaaaccaaggag
gagttttcctccagtgatgaagagcaggaggaggaggagcaggccgctaactcggacgaa
gacagcgatcagcagaagattaaaccaattcttgagtccgtgatggctagtattgatggt
ttccatcagtcatcaggtgatgaaattgaattgaaggctgaatcctcccaggtggtggat
gatgacgatgatccagagaatagaattgccaaaaggatgcttctggcgcaaatcaaagcc
aattattcatctggagctgacagttcatctgatgatgaaaacgcagacaaagaggacggg
gattcaccaaagaaaggaaaagatggtgctaagaagcaagacgaaagtgaggaagaggat
gaaacttcggactcgggctcagatgttgacgtgaagaaaggtggacgcagacaccgtttg
ttgagtaagaagttgactctaagcgaaggagactctgatgacgagaccccagtcaaaaac
aagaaagaaaccaaaaagagaggcaagcggaaagtggacagcgacgactctgcagactcg
gactttgagcagtcgcgctcgggctccagcgatgcatcagcgctcagtgagactgtgagt
gaagacgccgatgaagacaagagcaataagcgcaaaacacgaaacactgtgctcaactgg
ctcaatgagtttgagaagtggcaagaaggcctgaaggacgaggagagtttagaggtgaca
gagctggccacagtcaagaggcctcaggagagagcgtacgctttacagcgctggcaggag
gatggcggcgtcatgatcataggctacgagatgtaccgcaacctcacgcaaggacgaaac
atcaagagcaagaagctgaaggaaacctttcagaaaactctggttgatccaggtccggat
tttgtcatctgtgacgagggtcacgtgctgaagaacgaagcgtctgctgtctccaaagcc
atgaactccatcacgactcgtcggcgagtggtgctgacaggaaccccactgcagaacaac
ctgatagagtatcactgtatggtgaacttcatcaaggagaacctgctggggtcagtgaaa
gagttcagaaaccgcttcatcaaccccatccagaacggccagtgcgccgactccacgctg
actgatgtccgagtcatgaagaagcgcgcgcacatcctctacgagatgctggcaggatgc
gtccaaagaagagactacactgcccttacaaaattcctaccgccaaaacacgagtatgtg
ttagcgatacggttaacacccattcagtgcaagctttaccgatactacctggatcacttc
acagttaagtggtttagcggtgttatagctcaggccgcgattgttctgaagcagctccgc
agctgggagagaaagaatggcagctggcaccaggccgcggggcgatctgaaccaattccc
acgtccttatctaatgaagaattggcattgcatatcttccactgtgttttcattatcaaa
gtgattccagtcattaatacacgccatagcttcagtcctctactctggggatacttcgac
gaggacagtatggaggagttcatagcctcagagacagaggagtcctccatgagtttgacc
tctgaagatgagaagcccaaaagaaagaagaagcgaggcaaagggaaagagcagagctca
gacaagtccgacagcgatgacctggaagtgattaaggagtggaacaccagctctcgtgga
ggaaaccctgaggggcgcaacagagcagagcctgtggaagaggttcggccgtcgaactca
ggtcctggcagcccatcacctgactggtacaaagagtttgtgaccgagccagattctgag
gtgctggagcattctgggaaaatggtgcttctttttgagatcctccgcatggctgaagaa
ttggaagaaaaagtgttggtgttcagccagtctctcatttctctggacctcattgaagat
ttcctggagttggcaggcaaagccaaagaggaaggcaagctttcgccgtacaaaggtgag
ggcaagtggttcagaaacattgactactatcgtctagatggttcaacgaatgccgtgacc
aggaagaaatgggcagaggacttcaatgacaccagtaatgttcgggggcgattgttcctc
atctcaaccagagctggttctcttgggatcaacttggtagctgcaaacagggtcataatt
ttcgacgcctcatggaacccatcctacgacattcagagtattttcagagtctatcgcttt
ggccaagtgaagaccgtgtttgtctacaggtttttggctcagggaaccatggaggagaag
atctatgaccgacagatcgccaaacagtcgctgtccttcagagttgtggaccagcagcag
attgagcgtcattttaccatgaacgaactgacggagctgtacgcatttgagcccgaccag
ctggacgatccttcggagaagaagagcaagcgggccacacccatgctgcccaaggatcct
ttcctggcagaactccttcacagttacaaagatcacatcgtcggctaccacgagcatgac
tctttgctggaccacaaggaggaagaggcactgagtgaggaagatcgcaaggcggcctgg
gccgaatacgaggccgaaaagaaggggctgtccatgcgtttcaaccagccgtcctattct
cagatgggcatgggagcaggaccaaactcttacttccccttcaacgtggctgctttggcc
tccatgagtaaccaacagttggaggatttgattaaccagggcaggctgaaagtgttggaa
gccactaacgctctgaagtcagtgcccagggaaccactggaggacatcatcgcgcaggtg
tggaaggagaacccgagtttacccgaggcccaggttcagtccatggctcttgggaggcag
gccggctacgagctggaaatcaaacacagggaggctatttaccgtgatgtcctcggcaag
caacaaactctgatgatgtacgtgcagaaggtgatctccaaccgtaaggtgcaggagcag
cagctggcaatggcgaggcagggtcttctgctcaaccagctggccatgcagaatggtctt
actggccccataaatcagatggatctgctgggcttgtaccagcagctcggggcgctccag
ggcctcccctcctcacagctgggcaagaacccgggcccgtctaagggcctgtag
DBGET
integrated database retrieval system
