Sinocyclocheilus rhinocerous: 107732041
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Entry
107732041 CDS
T04916
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107732041
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107732041
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107732041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Sina_ZnF
zf-TRAF
TRAF2_zf
Motif
Other DBs
NCBI-GeneID:
107732041
NCBI-ProteinID:
XP_016398763
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MSERGRGMARGKQKMESRYLPLRHLPVRNPPLTELIATPSYNRPSVSRMHCGGHDLAVSS
CPVKCQRISTKELNHVLPLKNLILKLDIKCDNHARGCEKIVKLQHLAEHAEMCDYSPAKC
RNKGCSEVLNLKDMDAHMRESCDYRAVGICESGCGLMLTHKEQKLDNHCCLKALKAHNGA
LQGKVVSLDKELKKQALKSTKREKSLLAQLSAVHNELQMTALKYQKKFTEYSARIDSLSK
SLSPPCKGGETKSVTAILHRVSGSLGFNIVGGRPCADNKDGNSNEGIFVSKIVENGPADK
EGGLQIHDRIMEVNGKDLSKATHDQAVEAFRMANEPIMVQVLRRAPRPKPTGPSGEAQVV
DISTQTEITFQHIMALSKLPTSSPPVNVLEQYLLPEGHSPAHEYFDPSDFLEGMQHEIER
EELEYEEVDLYRTNIQDKLGLTVCYRTDDEDETGIYVSEIDPNSIAAKDGRIREGDRIIQ
INGFEIQNREEAVALLTSEEHPNVCLLLARPEIQLDEGWMDDDRNDYLDDLHMDMLEQQH
HQAMQFTASMLQQKKLEEDGGTTDTATLLSHHHEKDSGVGRTDDSTRNDESSEQENLADD
QTSASTTLGSRRLTYSQDTLGSGDLPFSSESFISADYADADFLGDFPADECERFRELLEL
KCQIRSMGSSGTPEQSLFWPSGGVGGGQGSVGEEGVDKELELLNEELRSIELECLSIVRA
HRMQQLREQCREQSWMLHNSGFRNYNTSVDARRHELADISELPEKSDKDSSSAYNTGESC
RSTPLTLELSPDNSLRRGNENQAEAGKCSGTSGASRILKPLLSPVQEACSPNRGHPTLSN
ESEAGTQPEIRERKAGRHAQPQSPYKHAHIPAHAQHYQSYMQLIQQKSVEYAQSQMSLVS
MCRDPVASADLGPKMEWKVKIRSDGTRYITKRPVRDKLLKERALRIREERSGMTTDDDAI
SEMKMGRYWSKEERKQHAVRAKEQRQRREFMKQSRMDCLKEQVGSIEDKKELNIIELSHK
KMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSLLSVTTV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaggggcagaggtatggcaagaggaaagcagaagatggagtccaggtatttg
cctctgaggcatcttcctgtcaggaaccctccactcacagagctgatagctactccaagc
tacaatagaccaagtgtatccagaatgcactgcggtggtcacgaccttgcagtgagcagc
tgcccggtcaaatgccaaaggatctccaccaaagagctcaaccacgtcctccctctgaaa
aacttaatattaaagttagacattaaatgtgacaatcacgcgcggggctgcgagaagatc
gtcaaactccagcacctggcggagcacgcggagatgtgcgattattcccctgccaaatgt
aggaataagggctgcagcgaagtgctgaaccttaaagatatggatgctcacatgcgtgaa
tcgtgtgattacagggcggtcgggatatgcgagagtggatgcggattgatgctcactcat
aaggagcaaaagttggacaaccactgctgtttgaaagccctcaaagcgcacaacggcgcg
ctgcaagggaaagttgtcagcttggataaggagctgaagaaacaagctctcaaatcgact
aaaagagagaaatcacttttggctcaactgtcggcggttcacaacgagcttcagatgaca
gcgctgaagtatcagaagaaatttacagaatacagcgccaggattgactcgctgtccaag
agtctttctccaccgtgtaagggtggagagaccaaaagtgtcacggctatactccatcgt
gtgtctggatctttaggcttcaatatcgttggaggaaggccatgtgcagataataaagat
ggcaattcgaatgaaggaatctttgtgtcgaagattgtggagaatggaccagcggataaa
gaagggggtttgcagatccatgacaggataatggaggtcaatggaaaggacttgtcaaag
gcgacgcatgaccaggcagtggaggccttccgtatggctaacgagcccattatggtccag
gtgctacgcagggctcccaggcccaaacctacaggcccaagtggggaagcgcaggtagtg
gacatcagcacccagacggaaatcaccttccagcatatcatggccctcagcaagctgcct
acgtcctccccacctgtgaatgtgcttgagcagtacctgctgccagagggacactctcct
gctcatgaatacttcgaccccagtgatttcctggagggcatgcagcatgagatagaaaga
gaagagctggaatatgaggaagtggatttatacagaactaatatccaggataaactgggg
ttaactgtgtgctacaggaccgatgatgaagatgagactgggatctatgtcagtgagatt
gatccgaacagtattgctgcaaaagatggacgaattcgagagggagatcgaatcatccag
atcaatggctttgagatccagaaccgtgaggaagcagtggctcttttaaccagtgaagaa
cacccaaatgtatgcctgctattggctcgaccagagatacaactggatgagggctggatg
gatgatgacagaaacgactacctggatgacctccacatggatatgttagagcaacaacac
catcaggccatgcagttcacagcaagcatgctccagcagaagaagcttgaggaggatgga
ggtacaacagacactgccacgctgctctcccaccatcatgagaaggacagtggagtgggg
cgcacagacgacagcactcgtaacgatgagagttctgagcaggagaatcttgcagacgac
cagaccagtgcctccacaacgctaggcagccgcaggctcacctacagtcaggacacccta
ggcagtggcgacctccccttcagcagcgagtccttcatttctgcagactatgcggacgcg
gacttcttgggcgactttcctgctgacgaatgcgagcggtttcgtgagcttttggagctc
aagtgccagatacggagcatgggcagcagcggtaccccagagcagagcttgttctggccc
agtggtggcgtaggtggtggacagggcagcgttggcgaggaaggtgtcgacaaagagctg
gagcttctgaatgaggagctccgcagcattgagcttgagtgcctgagcatagtccgagcg
catcgcatgcagcagttgcgtgagcagtgccgtgaacagtcctggatgctccacaacagc
ggcttccgcaactacaacacaagtgtggatgcaagacgccatgagctagcggacatcagc
gaactcccagagaagtccgacaaggacagctccagcgcatacaacacgggtgagagttgc
cgtagcacgccgctcacgctagagctctccccagacaactccttgcggcgtggaaatgaa
aatcaagcggaggcggggaagtgtagtggcacctcaggtgccagcagaattctcaaacct
ctgctgtctcccgtccaagaggcttgcagccctaacagaggtcatccgaccttgtcaaac
gagtccgaggctggaacccagcctgaaatccgagaacgcaaagctggtcgccatgcccag
ccgcagtcaccctataaacacgcccacatccccgcccacgcccagcactaccagagctac
atgcaactgatccagcaaaagtcagtggagtacgcccaaagccaaatgagcctagtcagc
atgtgccgggacccagttgcttctgctgacttgggacccaagatggaatggaaagtgaag
atccgcagtgacggtacgcgttacattaccaagcggcctgtccgggacaagctcctgaaa
gagcgagccctacggatccgagaggagcgcagcgggatgactacagacgatgatgccatc
agcgagatgaagatgggacgctactggagcaaagaggagcgcaagcaacacgccgtccgt
gccaaagagcagcgtcagcgcagggaatttatgaagcagagccgtatggactgtctaaag
gagcaagtgggcagcattgaagacaagaaggagctcaatattattgaactgagtcacaaa
aagatgatgaagaagcggaacaagaaaatctttgacaattggatgactatccaggaactg
ttgacccatggtacaaagtcccccgatgggacacgagtgtacaactccctactgtcagtg
accacggtgtag
DBGET
integrated database retrieval system
