Sinocyclocheilus rhinocerous: 107732098
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Entry
107732098 CDS
T04916
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107732098
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107732098
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107732098
03029 Mitochondrial biogenesis [BR:
srx03029
]
107732098
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107732098
Membrane trafficking [BR:
srx04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107732098
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107732098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
107732098
NCBI-ProteinID:
XP_016398832
UniProt:
A0A673LCI9
LinkDB
All DBs
Position
Unknown
AA seq
1622 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAVQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILSDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCLFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDTAYTNYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRQSYRESLEKSSSPHPRTTDEDENEDEVGET
STQSAILCPADSHKNRKSPSPVSASGEASSQASFSPQDRLKSSCSLKAALEEEEESPERG
ATPSFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLSECRETITKLDNQNM
KAIKGLEDRLYALDQMIASCKRLVNEQQELAQGFLANQKRAENLKDTSVLPDLCLSHANQ
LMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTEL
LERVRVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWANALVKDGKNLYEAEKVKRECFG
KLFRKSFLRNRLFRGLDSWPPSSFCTRKPRKFDFELPYISLSDLQYLKSCCPFEVQPYLR
VPTLCDFEPLNQSIAVLHQLVQAAQSVDEMSQTITDLLNEQKFSCSQSAQRFTALTPRSK
STTEITSTSTKTLSTLSLKAPDCQPLALPGHLEDLSPDSIDAQTFDFETIGHPNMDPVLQ
QGSLDLDSLAESPESDFMSAVNEFVIEENLMSPNPISDPTSPEMMVESLYSSVINAIDSK
RIQDTTTLEKENSKIAVLKLSADRYRSAAEESQNNLRKVKEDIYHFRGLVLKEQRDFGFT
LKTMTIEVRNALNSVRYCHEEELRETQQTDLQSLKDDHEKQIQTLTEELEGNRKIVRDVQ
RAMLELEGLVERKEKEISQLESVRERSMQELQDLHKQTVQDLEEKILKQSEELKATLLSK
DELAGQLENLHFEIEHGQQKIRQEMEKAEKVHLQELEARLKQQHEAELESLRLEKESALD
KLVQENLLKLRDLVDSHSAELKEREGRLKDLEAHITELADARCKLEVEMALKEAEMEDMG
LQYEEAKSTQEEVLRAELATQTATLQSQIDMLNQQLQQKNEDYEVGLAELRALMRLEKDH
CISELVDRHEEENTLLRQAFSALKQKSQDAEKDCKERVQKIQRDLQYQFDALQREKEDEQ
RAFQEKEQELKTVIGDLQAENSLLLGRLERERVEALQRVEKEKEEAVKAALQEALRDFQL
QKEETETRLLGQIELLENQLKDRQSTDTVGPTVEKTETGMETSAALSLDSGQWTEERASL
LAKLELLERTKNEEMQNLKTSLIAEQQTNFNTVLIREKLKKEQIISDLTEKLKNLAQQQE
KDKGLIETLSEDRASILQEKKQMEEELNHLRSTVLVSSSFFPPNPIPVVTEAHGACGPAH
VEVLLLSTPDPERLAYVAAFKDEERVESAVEASMMTVHDNPMLSEEKQRILILERTLHMK
EEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYF
LHSESLTALDLKPATGETRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNK
KV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgtttcaagtcaacaacggaagcacattgacatttgacactgaactt
gctgtccaaactgttttggaccttaaacatgccattcaggccaaatataaaattgcagtc
cagcaccaggtgctggtggtcaatggaggggagtgtatggtggcagagaggcgcgtgtgc
agctacagtgccggaacggacaccaacccgatcttcttattcaacaaagagatgatcctg
tctgaccgagctccaaccatccccaaaacgaccttctccatagagaatgagatggagctg
aaggtggaggagtcactcatgatgcctgccgtctttcacaccgtcgcttcccgcactcaa
ctggctgtggaaatgtttgaggttgccaagaagctttgcttgttctgtgagcgtctggtc
catgatgaacaccttcagcaccagggatgggcggccatcatggctaacctggacgattgc
accctatcctatcaaaaactcctcatgaaattcgacactgcttatacaaattaccaacag
gattttgaagacatcaaattaaaactcacaaagcttggcactgctgtctcagtcatggcg
aagattccactgcttgagtgtttgactcggcagagctacagagaaagcttggagaagtcc
agctcccctcacccgagaaccacagatgaagacgagaatgaggatgaagtaggagaaaca
tccacccagtccgctatcctctgtcccgctgacagccataagaatcggaagtcaccctcg
ccggtctctgcttcaggggaagcgtcgtcccaggcgtccttctctcctcaggacagactg
aagagcagctgtagtctaaaagcagctctagaggaagaggaggagtctccggagagggga
gccacaccctctttcaatgtcacgctcttggattggatcaacgttcaggacagacctaac
gatgtggagtcagtagtgaggaagtgttttgactcaatcaacaggctcgacccacgaatt
atccaaccctttctatctgaatgccgcgagacgattaccaaattggataatcagaacatg
aaggccatcaaaggacttgaagaccgattgtatgctcttgaccaaatgatagcaagctgt
aaacggttggtcaatgaacagcaggaacttgctcagggatttcttgccaatcagaagagg
gctgaaaacctgaaggacacctcggtgctgcctgacctgtgtctgagtcacgccaaccag
ctgatgatcatgctgaccaatcacaggaaactactagacatcaagcagaagtgtaccact
gccaaacaggagctcgccaacaaccttcaagttcgtctcaaatggtgctgctacgtgatg
cttcacgctgatcaggatggagagaagctgcaggctctcctgaggctgctgacggagctg
ctggagcgcgtgcgggtggtggaggcgctcagcactgtgccacagatgtactgtctcgcc
gtagtggaggtggtcagacgcaaaatgtttataggacactacagacaatgggccaatgct
cttgtgaaagatgggaaaaacctctatgaggcagaaaaagtaaaaagggaatgctttggg
aagctcttcaggaaatcgttcctcagaaaccggttgtttcgaggactggactcatggcca
ccctcttcgttttgcacccgaaagcctcgaaagtttgactttgagcttccatatatttcc
ctgagtgacctgcagtatctcaagtcctgttgtcctttcgaggttcagccttacctcagg
gtcccaacactatgtgactttgagcctcttaaccagagtattgcggttcttcatcagctg
gttcaggctgcgcagagtgtggacgagatgtcacaaactatcacagacctactaaatgaa
caaaagttttcctgtagccagagtgctcaaagattcaccgcattaacacccagatctaaa
agcacaactgaaatcacctctacctccaccaaaactttgtccactctcagtttaaaagca
ccggactgccaacccctggcgcttcctggtcacttggaggacctatcacctgacagcata
gatgcccagacttttgactttgaaaccattgggcatcccaatatggatcctgtattacag
caaggctcgttggacttggactcgttggcagaaagtcctgagtcggatttcatgtcagca
gttaatgagtttgttattgaggagaacttgatgtcacctaatcccataagtgatcccaca
agcccagagatgatggtggagtctctttactcctctgtcattaatgcaatcgatagcaag
cgtatacaggacactactacacttgagaaggaaaattcaaagattgcagtactcaagctg
tcagcagacaggtaccgttctgctgcggaagagtcccagaacaatttgaggaaagttaaa
gaagacatttatcactttcgaggtcttgttctgaaagagcaaagagactttggattcacc
ctgaaaacaatgaccattgaggtccgaaacgctctcaacagtgtcagatactgtcacgag
gaggagctgagagaaacgcaacaaaccgatctccagagtttgaaggacgatcatgaaaag
cagatacaaactctcacggaagagcttgaaggcaatcggaagattgttcgagacgtccag
agagcaatgctagaattggaggggctcgtggagcgcaaggagaaggaaatatcccagctg
gagagtgtgagggaacgctctatgcaagaacttcaagatcttcacaagcaaactgtgcag
gaccttgaggagaagatcttgaagcaaagtgaagaactgaaagctacattgctgtccaag
gacgaactcgctgggcagctggagaaccttcactttgagatcgagcacggccaacagaaa
atcagacaggagatggagaaggcagagaaggtgcaccttcaggaactggaggcacggttg
aaacaacaacatgaagcagagctggaatctctcagattggaaaaagaaagtgcacttgac
aaacttgtccaggagaacctgttgaagctaagagatctggtggattcccattctgctgaa
ctcaaggaacgtgagggacgcttgaaagacttggaggctcacatcacagaacttgcagat
gcccgctgcaaactggaagtggagatggctcttaaagaggccgaaatggaggacatggga
ctccagtacgaggaggccaaaagtacccaagaggaggtgttgagagcggagcttgctacc
caaacagccaccttgcaatcgcagatcgacatgttgaaccagcagctccagcagaagaac
gaagactacgaggtgggcctggccgagctccgagcgctcatgaggttggagaaggaccac
tgcatctctgaactcgtggatcggcatgaagaggagaacaccctgctccgccaagcgttt
tcagcactcaaacagaagtcgcaggatgcggagaaagactgcaaagaacgagtccagaag
atccagcgcgatctccagtaccagtttgatgccttacagagggaaaaggaggatgagcag
agggctttccaggagaaagagcaagagcttaagactgttatcggagacctgcaggcagaa
aactcactactattgggaagactggagcgggagagggtggaggccctgcagagagtggag
aaggagaaagaggaggcagtcaaagctgcattacaagaggccttaagagactttcaactc
caaaaagaggagaccgagacaagactgttaggacaaattgagctacttgaaaatcagctc
aaagacagacaatccactgacacagtgggacctactgtagaaaaaacagagactggtatg
gaaaccagtgctgcattgtcactggacagtggccagtggaccgaggaaagggcatcactc
ctggccaaactagagctcctggaacgcacaaagaacgaggagatgcagaacctgaagacc
tcgctcattgctgagcagcagacaaacttcaatactgttctgatccgggagaaactaaag
aaagaacaaatcatcagtgatctcaccgagaagctcaaaaacttggcacagcaacaagag
aaagataaaggcttgatcgaaacgctctctgaggaccgtgcctccatccttcaggagaag
aagcagatggaggaggaactcaaccatctgcgaagcaccgtcctcgtctcttcgtccttc
tttccgcccaatcccatcccagtcgtcacggaagctcacggcgcctgtggccccgcccat
gtggaagtcctcttgctgtccacccctgatccagagagattggcgtacgtggctgcgttc
aaggatgaggagagggtggagtcagccgtggaggccagcatgatgacagtgcatgacaac
cctatgctgtctgaagagaaacagcgcatactgattttggaaaggactttacatatgaag
gaggaagagaacaaaagacttagtcaaagattgatgtcacagagtatgtcgtccgtctcg
tcacggcactctgagaaaatcgccattcgagattttcaggtgggcgacttggttctcata
atcctggacgagaggcacgataattacgttctcttcactgttggtcccaccctttatttc
ctgcactcagagtccctcactgcactggacctcaaaccagcgacaggagaaacaagacgg
ccgtgggttctaggaaaagtcatggagaaggaatattgccaagccaaaaaggcccaaaac
cggttcaaagttcctctcggcactaaattctacagagtaaaggccgtgccatggaacaag
aaagtgtaa
DBGET
integrated database retrieval system
