Sinocyclocheilus rhinocerous: 107732389
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Entry
107732389 CDS
T04916
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107732389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107732389
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107732389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
107732389
NCBI-ProteinID:
XP_016399178
UniProt:
A0A673IF70
LinkDB
All DBs
Position
Unknown
AA seq
2353 aa
AA seq
DB search
MAAVLQQILERSEISKLPKTVLTKLEKYISEQQREVDCLKAQQEQYRVDNEQQYFDIEKK
FAESQAQFVSQTQEHQILKEEYCKLEDELKCLREKNKEQVSSYTKLESHQNELSKAKDEL
EAEKRELVRTLERRSQEMEQQSEDLKRLNDRLVEVSSEKMQLQLKLDESEATEVSIKYKE
KRMEQEKDLLQNQVTWLKTELKAKSEELLSLSRQKGSEILELQCNLNNKEDEIAHLQDQV
TSMKASNEKLQRQAEEMITKMREAKQQQASLEEKFSNELSANIKLSNLYKGAAADAEAKS
EELSRAVDELHKLLKEAGEAHKALEVKMAELESCKDKEIAELKEKISSQEKELDNANELL
SDAKHRGTASILSEEQVTTMSPTAAAIAKIIKPGMKLTEIYTAYVETQEQLQREKLENKR
LHKYLDDIVQEMEAKAPILKRQREEYERMQKSVSSLSAKLEQAVTEVHRLQKEADESNKR
ASVLERDNQRFEVQLADMSQQVRVLLIELEEARGNHVMREEDEVCSADVSSTSEVISQHL
VTFRTVEELQQQNQRLLVALRDLSEEKDELEGDTMKRREVEKYLEELQRELEQLKEKRAQ
DLQKVDAVARQRDMFRMLLTQATGVTFPQGAGNEELMLTSTPRRSPAVTPTAGTPTGLVA
TVIESTESVEAKAALKQLQEVFVGYKKEKTESGKALTEQSEKLQDQVTELRSENTKISTQ
LEFTSKRYEMLQDNVEGYRKEIASLNEKSQKQAAAIQQSEQTIHTLNQDLRAAAEKLSIA
ESEAENLRKERDMLKMVEIRLTQEKESFQAQQLGQNMLLTNLKSIQATLERSETETRQRL
TAQIEKQEREIAQLQKRLENEVEQKHLLARNQDMQLMDVKKQLETQTSQYHRTREQLSAA
QLELNNLKLQMSSKESRLLSPTIHTGLQGSEGGIEALRAQLKQAESKVEELAERLKNTTA
SMEQYKAMSLSLEESLDKEKQVTEQVRSSVQTQVEAAQEQYKQLEQKLLEADKEKQSMLE
EKSKAVAAVEQELNELKKSLSSLQAEHQSVLERAAVAAAQEQQAILDSQEQAKMAAEAQD
KYEREMLLHAADVEALQATKAQALQAAHLRQQLEEKVQRTSAQLLEARVSWEEQEKILKE
EQSKLESRCEDLQRQNTLLHEQIQTLSGQMASQLQRATSESPLNVSLTEEGKSQEQLLEI
LRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDVQERLNAEREKMQVTAKTLAQH
DELMKKTETMNVLMETNKMLREEKKKLEQELQDTQAKVRKLESDILPMQESNAELSEKSG
MLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEREAHLKRIQQLVEETSRLK
AEASRNSGSLTMMQSQVQNLRENLGKVMVERDSLKKDQEAKNLDIQEKLKTITQVKKIGR
RYKTQYEELKVEYDKLVAAAASAPAQDQEAQQASAQEIQALKESLNQSENRTRELEGHLE
NLNRTVGERETEARNAQEQASRLQAELTRLRQELQEKSSQEERLKQQLTEKEERTKKAIV
MAKQKISQLSVVKGQLQKENEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQQE
RHGEQRDEPPEQGSSKTQEPQRTTEQRQISLKSTPVAERGSASTSEPPTANIKPTPLAAT
PSKPPAIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVESQEPMQSSEGPLEHVTV
YGSASGSVRSTSPNVQTTLAQPLLTIQQQSQATAFIQPTQQQTQPPAEPSNQEPLAAVML
PNSQLDRPLSTSTGIWSATASTSSASAVSASPSSALSKRPREEEQESMSADTQSQDEPSD
IPFCKRVRIHRVGLEEEMLAEDSTEAESVVPGESQEAPDAGQELESYATLEEMDEETGPS
QSVPGDRLLPHPSETHRSPEEPDHHVIVIVSDTDSEGDHEEESEEEEEEEEEEQDYEDEE
EEEEEEDDDDDEDGGIGEEGEESNEGSGSRDGNEAYEGDDTEGPEDPGTETEESLGATDS
TQRMADSQSFETSTLDVFEAPVTSSAPRPHPQSPRRPQHPLPPRLNILAPPAQELGPPAQ
VQRLPVRWPSVGRGLQLSSGMASSAQHFYEDDDRMVPSTRTLPPPRSDGYAEAIHSPQVA
GVSRFRFGPSDDLSQTSSSHSDLGQLPSQGLGMYESSVFLGAYEEESGGRSVPTTPLQIA
APVTILSETVASEAIEHASQSVPMVSTSTPGLSAPAGPSGVEERDDMFMDAGDSAEASLE
AVSQTEAEELAQLSDEACLPSTSQEPSSSSADTSSSQPPKVRTGSGRQWTVGRGSRSFVK
RDGVMGMRGRFAR
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcagatattggagcggtcggagatatcaaaactccccaaaact
gtcttgactaaattagagaagtatatttctgaacagcaacgtgaagttgattgtctgaag
gcacaacaggagcaatatcgtgtggataatgaacaacagtattttgacatcgagaagaag
tttgcagagagtcaggctcagtttgtgtcccagactcaagagcatcagatactgaaagaa
gagtactgcaaactggaggatgagctgaaatgcttacgagagaaaaataaggagcaagtg
tcttcatacaccaaactagaatcacatcagaatgaactttccaaagccaaagatgaactt
gaggccgaaaaacgagagcttgtgcggacattggaaagaagatcccaggagatggaacaa
caaagcgaggacctgaagcgtcttaatgatagattggtggaagtcagttcagagaagatg
cagcttcagctcaagctggatgagtcagaagccactgaggtctcaatcaagtataaagag
aagcgaatggagcaggagaaagatctactccagaatcaggtgacctggctgaaaactgag
cttaaggccaagagtgaagagctgctgtctctttcccggcagaaaggcagtgagatcctg
gagctccaatgcaaccttaataacaaggaggatgaaatcgcccacctccaagatcaggtc
accagtatgaaggcatccaatgagaaacttcagaggcaagcagaggagatgatcaccaag
atgagagaggctaagcaacagcaagccagtttggaggagaagttcagtaatgagctcagt
gccaacatcaaactctcaaatttgtataagggagctgcagctgatgcagaggccaagagt
gaggagctcagcagagctgttgatgaacttcacaagctgcttaaagaggccggagaggca
cataaagctctggaagtgaagatggcagagctggagagttgtaaggacaaagaaatcgct
gaactaaaagagaaaataagcagccaggagaaagagctggataatgcaaatgagctgctg
tctgatgccaaacacagaggaactgcttcaattctttcagaggagcaggtgaccacaatg
tctcccacagcagctgcaattgccaaaatcatcaaaccaggcatgaaacttacagagata
tatacagcttatgttgagacccaagaacagctacaacgtgagaaactagagaacaaacga
ctgcacaagtacctggatgacattgtgcaggagatggaagcaaaggcgcccatcctgaag
agacagagagaggagtatgagcgcatgcaaaagtctgtttccagtctctctgctaaatta
gagcaagctgtcacggaggtccaccgcttgcagaaagaagcagatgaaagcaacaaacgt
gcatctgtgttggagagagataaccagaggtttgaggtgcagctggctgacatgtctcaa
caggtgcgggtcctccttattgagctggaggaagcgcgtggtaaccatgtgatgcgtgag
gaggatgaggtgtgttctgcggatgtgagcagcacatcagaggtgatttctcaacacctg
gtcaccttccgcaccgttgaagagctgcagcagcagaaccagcgactcctagtggcacta
agagatctcagtgaggaaaaggatgagttggagggagacaccatgaaacggcgtgaggtg
gagaaatatctcgaggagcttcagcgtgagttggagcagctaaaggaaaagagagctcag
gatctgcagaaggttgacgctgtggcacgacaaagggatatgttccgcatgcttctgacc
caggccactggagtcaccttcccacagggtgctggtaatgaggagcttatgctgacctcc
accccccgtcgttctccagccgtcacacccactgcaggcacccctacaggactggttgcc
actgtgatagaatccactgagtcagtagaagccaaggctgcactgaagcagcttcaggaa
gtctttgtgggctataaaaaggaaaaaactgagtctggaaaagccctgactgagcaaagc
gagaaacttcaggatcaagtgactgaactccgctctgaaaacaccaagatctccacacag
ctggagttcacctccaaacggtatgagatgctccaggataacgtggagggctaccgtaag
gagattgcctctttgaatgagaagagtcagaaacaggctgcagcaattcagcagagtgaa
cagaccatacacacccttaaccaggacctccgagcagcagctgagaaactctccattgct
gagtctgaagcagagaacctgcgtaaagagagagacatgttgaagatggtggagatcaga
ctgacccaggagaaagagtccttccaggcccaacagcttggccaaaacatgctgctgacc
aacctcaaatcaatacaggcaactctagagcgctctgagacagagaccagacagcggctg
actgctcagattgagaagcaggagcgagagattgctcagctccagaagagactcgagaat
gaggtggaacagaagcacctgctggcacgcaatcaagatatgcagctgatggatgttaag
aagcagctggaaacacagacttcccagtaccacaggacaagagagcagcttagtgctgcc
caacttgagcttaacaatctaaagctgcagatgagtagcaaggagagccggctgttatcc
cccacaatacatacaggcctgcaaggcagtgaaggtggcatagaggctctgcgtgctcag
ctgaagcaggctgagagcaaggtagaagagctggctgaacgactgaagaacactactgca
agcatggaacagtacaaggccatgagtcttagcttagaggagtccctggataaagagaaa
caggtaactgagcaggtgcgatcatctgtgcaaacccaggtggaggcggctcaggaacag
tataaacagctggagcagaaacttctggaagcagacaaggagaagcagagtatgctagaa
gagaaaagcaaagctgttgctgctgtggagcaagagttgaatgagctgaagaaatctcta
agcagcctgcaggcggagcaccagagcgtcctggagagagctgctgttgctgctgcacag
gaacagcaggccatcctggacagtcaggagcaggctaagatggcagctgaggcgcaggat
aagtacgagagggagatgttgctgcatgcagctgatgtggaagcactgcaggctaccaaa
gcacaggctctgcaggcagctcatctcagacagcagctggaggagaaagttcagcgcacc
agtgcacagcttctagaggctcgtgtctcttgggaggagcaagagaagattctcaaggag
gagcagtctaagttagagtctcgctgtgaggatctgcagaggcagaacacactccttcac
gagcagatacagactctgagtggacaaatggccagtcagctgcagcgagccaccagcgag
agtccactcaacgtctctctgacagaggagggcaagtctcaggagcagctcctggagatc
ctaagatttgtgcggcgtgagaaggagatcgcagagtcccggtttgaggtggtccagggt
gagagtctgaggcacaggctgagagtggaacatctggagagagaactgaaggatgtgcag
gagcgtctgaatgcagagagagagaagatgcaggtgactgcaaagactctggcccagcat
gatgagctgatgaagaagactgagaccatgaatgtgctaatggagaccaataagatgctg
agggaggagaaaaagaaactggaacaggagctgcaggatacacaagccaaggtacgtaaa
cttgagtcagacatcttgcccatgcaggagtccaatgcagagctgagtgagaagagtggt
atgctacaggcagagaaaaagcttctggaagaagatatcaaacgctggaaagctcgcact
cagcacctggtgagccagcagaaggacactgacccagaagagtacaagcggctgcactct
gagagggaagcgcatctcaaacgcatccagcagcttgtcgaggagactagtcggctcaaa
gctgaagcttccaggaacagtggctctttgactatgatgcagtctcaggtgcagaaccta
agggagaacttggggaaggtgatggtggagagggacagcctgaagaaagaccaggaggcc
aaaaatctggacatccaggagaaactaaaaacaatcacacaagttaaaaagattggtcga
cgttacaaaacccagtacgaagagctcaaggttgaatatgacaagttggtagctgcagca
gcatctgcacccgctcaagatcaagaggcacagcaggcatcagctcaagaaattcaggcc
ctcaaagagtccctcaaccaatcagagaacaggactagagaactggaaggccatctggag
aatctcaatagaactgtaggagagcgggaaacagaggcacgcaatgcacaggaacaggcc
tctcgtctacaagcggagctgacgcgtctcaggcaggagcttcaggagaaatcatctcag
gaggagcgactcaaacagcagctgactgaaaaggaggagaggaccaagaaggcaatagta
atggccaagcagaagatcagccagctttctgttgtaaaaggtcagctccagaaagaaaat
gaggagctgaagcaacaaaaagaggaattggaagtgcgagtgagtgcactaaagtctcag
tatgagggtcgtctgagcagacaggaaagggagctgcgagaccttcgcgagcagcaggag
agacatggagaacagagagatgagcctccagagcagggctccagcaagacccaggaaccg
caaaggacaacagaacagcgacagatctctctgaagtccacaccagtggcagaaagagga
agtgcaagcacttcagagcccccaactgcgaacataaagcccacgccactggcagcaacc
cccagcaagcctccagccattccaggaaacaaatccaccccaagggccagcattaaacct
atgatcactcctgccccagtgcccacccctacacccactgccacagtcatgcccaccacg
caggtggagagccaagagcctatgcagtcatccgagggcccgcttgagcatgtgactgtg
tatggcagtgccagcggttcagtgcggtccacgagccctaatgttcagaccacccttgct
caacctctgctgaccattcaacagcagagccaggccactgcgttcatccagcccacccag
caacaaacccaaccccctgctgaaccatccaatcaggaacctctagctgctgtaatgctc
ccaaactcacagttagacaggcctctttctacatccacagggatatggagtgccaccgct
agcacaagcagtgccagtgcagtgtccgcatctcctagtagtgccttgagcaaacgcccc
cgtgaagaggaacaagagagcatgtctgctgacacacagtctcaggatgagcccagtgac
attcccttttgcaagagggttcgcattcatagagtaggtctggaggaagagatgctggct
gaagacagcactgaggctgagagcgttgtaccgggtgagagccaggaggctcctgacgct
ggacaggagttggagagttacgctactttggaggagatggatgaggaaaccggaccgtct
cagtctgtccctggagaccgacttctgccccatccatctgagacccatcgaagcccggag
gagcctgatcatcatgtcatagtcattgttagtgacacagatagtgagggagaccatgaa
gaggaatctgaggaggaggaggaggaggaggaagaggagcaggattacgaggatgaggaa
gaggaggaggaggaggaagatgatgatgatgatgaggatggcggtattggggaagaggga
gaagagagcaatgaaggtagcggcagcagagatggcaatgaggcctacgagggggacgac
acagagggccctgaggatccaggcactgagacagaggaaagtcttggagcgacagactcc
acccaacgcatggcagattctcagagctttgaaactagcacattggatgtttttgaagca
cctgtcaccagttctgcccctcgacctcacccccaatcacccaggagacctcagcatcct
cttccacctcgtctaaacatcttggccccacctgctcaggagttgggaccccctgctcaa
gtccagcggctcccagttcgatggccgtcagtgggacgaggcctccagctttcttctgga
atggccagtagtgcacaacatttctatgaggatgatgacaggatggttcctagtacccgt
acacttcctcctcctcgctcagacggatatgctgaagcaatccattctccacaggtggca
ggcgtgtcacgatttcgattcggtccttcagatgatctctcgcagaccagctcctctcac
tcagatcttggccagctgccatcacaaggtttaggcatgtatgagagttctgttttcctt
ggagcttatgaggaggagtcaggaggccgcagtgtgcccacaaccccactacagattgcc
gctcctgtgacaattttatcagaaaccgtggcatctgaagcgattgagcatgcttctcag
tctgtgcccatggtgagcacctccacacccggccttagtgctcctgcaggcccgagtgga
gtggaggagagagacgacatgttcatggacgcaggagacagtgctgaggcttcacttgag
gctgtgtcacagactgaggcggaggaactagcccagctatcagatgaggcctgtctgcct
tccacaagccaggaaccttcatctagttctgcagacacaagcagctctcagcctcctaaa
gtcagaacgggatctgggagacagtggactgttggtcgtggttctaggagctttgtaaag
agagatggcgtcatgggtatgaggggacgttttgccaggtga
DBGET
integrated database retrieval system
