Sinocyclocheilus rhinocerous: 107732527
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Entry
107732527 CDS
T04916
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107732527 (ubr1)
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107732527 (ubr1)
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
107732527 (ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
107732527
NCBI-ProteinID:
XP_016399376
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MAFYLLCYVIKTFKLLQIRPSCVAVVTLYGIWIMAESLNGVQLSTKWQEASNRGAAILSY
LGEQVPLIYCLEAEPQQGEEEQRVEERLLYPLECFLFGEDPCVGLEKLQQYSGSSSAQQC
GRVFKEGETVYSCRDCAIDPTCVLCIECFQKSVHKSHRYKMHASAGGGFCDCGDLEAWKT
GPCCSQHDPGASVTMETDECVMDPGLQERAQMLFHLLLRYTTDMLVWEDANELSEELKPK
VMEDTYFCVLYNDEHHSYDHVIYTLQHVIACDQNQAQIYTALIDKEGRKAVKRGTLRSCQ
QAKDNIRRNSEHIIQKPLRVEILHTAVMAHQTFALRLGAWFQKIIGYSVGLREVFCQVAL
EPASDNNKPCLISQLMLHDAKLYKGARKVVHELIFSSLLMDTEYKRQFAMKFTELYKQLQ
VDFICDDHQRNVSITALSVQIFTVPTLARQLIEEGSVIKVIIDTVMDMMREHLDSNQRFH
FQGHNPDKFFRVQVIFHDLRYILISKPSLWTETLREKFLEGLRVFLRFLCCMQGMEEVKR
QLGQHVEVEPEWEAGFSLQMQLRHILAMFQDWCSSDERVLLLAFQECHRALMSCTNQPFC
SEPTDSYMCKQILHARLYKVSQEPISIHLPISRLLAGLYVLLCQSGAIQYLPDFVDTVQL
NFTELAEQPLRCVVLAAQVCADMWRRNGLSLVSQVYYYQDLKCRDEMFDKDIIMLQIAAS
KMDPNHFLILVLLRFELFDIFNGNSSSKDQEVLKQWNRLTEEMLYLIIIIVGERYVPGIS
HVTKEDVTMREVIHLLCIQAMAHSSLVKSLPENESHETWLETVISKVAVFKKPGVSGHGL
YELKKECLKEFNPFFYHYSRPQHSKAEEAQKKRRTQEGSDKALRPPVPPPFCPGFSNIVY
LLCCDIFIHILRRIFQKAVEDRSSRWTEPMIQRALHLVGQALLEEKTQLESNSTEEVSFD
FSLKAQKTGSEHGKSLFHFLTKIKSLPSLKAQNDMITWNLQMFEVVKCLREKSGPVTSFS
VDHSKLEESVQDKEKAERKRKAEAAKAHRQKIMAQMSTMQKNFIESNKMLYGNVPESSSQ
SDTTASVESFDVDESRVAVGPQQGVCSTDWGAQICILCQEEQEVQAQAPAMVLTACVQRS
TVLTQDRGKTLSPKVGCYPLFMPPDLAVGTHTGSCGHVMHATCWQKYFEAVQNTTRNRLH
ADLIIDLENGEFMCPLCKSLCNTVIPLIPVEPSKLNYESAELVGQHLTLERWIQIMSSRI
RGLRGTWETDNNGEEAVEEAMVLFDESQADFRSILSFGVQEPPKFSRSITEMLGVCATTV
HRVGLQTAPNDLCPYVPVMSWNTCAYTIQAIESMLQEEGKALFGSLQNRQLSGLKALVQF
SASQRLKSKQAVIQKHFADMLAVLVPVPTVENAPSILEVDFFHLLVGLVLSIPALYQEEA
VDLQPSAVSTAFNHLYLLHLVTMGHMLQILLASHDCAVIRGPEEGDEAQAAAELFSIVSQ
HTDGLRAGVSGFSVESVKRGVLPFLRCAALFFNCLTGVPPPEELSGTAESPESQLPLLCS
YLSLPSNLFQLFQEHRDVVTTLIKRWCGDTAISKALKGEMQIIRYPRKRNRLINLPEDYS
VLLNQASHFKCPNSSDDERKHPTLCLLCGVMLCAQSPCCQQQLNGEEVGACTAHATICGA
GVGMFLRVRECEIILMASKTRGSPYPAPYLDDYGETDPQLGRGNPLHLCPERYRKLLHMW
QQHCILEEIARSLELLNVMFPFEWQML
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggccttttatttattgtgttatgtaataaagacttttaaactgttgcaaatccgtcct
agttgtgttgctgtagtgacgctttacggcatttggatcatggcggagtcgctgaacggt
gtacaattgagcacgaaatggcaggaggcttcaaacagaggggctgccatactcagctat
ttgggggagcaggtcccccttatttactgcctggaggcggagccacaacaaggggaggag
gagcaaagggttgaggaacgcctcctgtatcctctggaatgcttcctttttggggaggac
ccctgtgtcgggctggagaagctacagcaatacagcggcagctcatcagctcagcagtgt
ggacgtgtctttaaagagggcgagaccgtctactcctgcagggattgtgcaatagatccc
acctgtgtactctgcatagaatgcttccagaagagtgtgcacaaaagtcatcgctataag
atgcatgcctcagcaggaggaggtttctgcgactgtggagacttggaggcctggaagact
ggaccctgctgctcccaacacgaccctggcgcttcagttactatggaaacggatgagtgt
gtgatggatccaggccttcaggaaagggctcagatgctgttccacctgctgctgcggtac
acaacagacatgctggtttgggaagatgccaatgaactatcagaggagctgaagccaaaa
gtgatggaagacacctacttctgtgtgctctacaacgatgagcatcactcatatgaccac
gtcatctacacacttcagcacgtgattgcatgtgaccagaatcaggcccaaatctacact
gcacttattgacaaggaagggcggaaagcagtgaagagaggtactctcagatcctgccag
caagccaaggacaatatcaggcgtaactcggagcacattatccagaaacctttgcgggtg
gagattcttcacactgctgtaatggctcatcagaccttcgccctcagacttggcgcatgg
ttccaaaagatcattggctactcagttggcctcagggaggtgttctgccaggtggctttg
gagccggcctctgacaacaataaaccctgcctgatcagtcaactcatgctgcacgacgcc
aaactatataaaggagcccgcaaggttgtgcacgagttaatttttagtagtttactgatg
gacacagaatacaagaggcagtttgccatgaaattcacagagctctacaagcaacttcag
gtagactttatctgtgatgaccatcaaaggaacgtctcaatcacagccttgtctgtgcaa
atcttcactgttcccactttggccaggcagttgatagaggagggcagcgtcatcaaggtc
attatagacaccgtaatggatatgatgagggaacatctggacagcaaccaacgcttccac
ttccagggccacaaccccgacaagttcttccgggttcaagttatcttccatgacctcagg
tacattctaatcagtaagccctctctttggactgagacgttgagggagaagttccttgaa
ggtttacgtgtctttcttcgcttcctatgttgtatgcaggggatggaggaggtgaagaga
cagcttggtcagcatgttgaggtggagcccgagtgggaggcaggatttagcctccagatg
cagctacgccatattctcgccatgtttcaggactggtgttcttctgacgagagggttctg
ttgttggcctttcaggagtgtcacagagctctaatgtcctgcaccaaccagcccttctgc
agcgagccaacagacagctacatgtgcaagcagatcctccacgcacggctgtataaagtc
tcccaggagcccatctccatccatctgcccatctccagactcctggccggtttatatgtg
ctgttgtgccagtctggagcaatccaatacctccctgactttgtggatactgtgcagctg
aacttcactgagctggcggagcagcctctgcgctgtgttgtgctggcggctcaggtgtgt
gctgacatgtggcgcagaaacggcctgtcgctcgtcagccaggtgtattactatcaggat
cttaagtgcagggatgaaatgtttgataaggatattatcatgttgcagattgctgcttcc
aaaatggaccccaatcatttcctcatacttgttcttctgagatttgaactttttgatatt
tttaatggcaactcctccagtaaagatcaggaggtactgaaacagtggaataggttaaca
gaagagatgctttacctgattatcatcattgtaggtgaacggtatgtacctggaatcagt
catgtgactaaggaggatgtgactatgagggaggtcatccatctgctttgtattcaagcc
atggctcatagcagcctggttaaaagtctgcctgaaaatgaaagccatgaaacatggctt
gaaacagtcatctctaaggttgccgttttcaagaaaccaggagtgtcaggccatggcttg
tatgaactgaagaaggaatgtctgaaagagtttaaccccttcttctatcattattccaga
cctcaacatagtaaggcagaagaggctcagaagaagaggaggacccaagagggcagtgat
aaagccctccgtcccccagtgccccctcccttctgtccaggattctcaaacatagtgtat
ctgctctgctgtgacatcttcatccatattctgaggagaatcttccaaaaagcagtggag
gaccgttccagccgatggactgaacccatgatccagagggcactgcaccttgtaggccag
gctctactggaggaaaaaacacagttggaaagcaacagtactgaggaagtgtcttttgac
tttagtctgaaagctcaaaaaactggttctgaacatggcaaatctttgttccacttcctg
accaaaataaagtcgttaccttctttgaaagctcagaatgacatgatcacatggaactta
cagatgtttgaggtggtgaagtgtcttcgggagaaatccggtccggtaacttcattttct
gtggatcacagcaagttggaggagagtgttcaggataaggagaaagccgagcggaagagg
aaggctgaggctgctaaagcccacaggcagaagatcatggctcagatgtcgaccatgcag
aagaacttcatagagtccaacaagatgctttatggcaacgtgcctgagagctcgagtcag
agcgacaccactgcgtctgtggagagcttcgatgtggatgagagcagagtggctgtgggc
cctcagcagggcgtttgttccacagactggggggctcagatctgcatcctgtgtcaagag
gagcaggaagttcaggctcaggcaccagccatggtcctcacagcatgtgtgcagagatct
actgttcttacccaagaccgtggaaagacactctcccctaaagtaggctgctatcccctg
ttcatgcccccagatctggctgtgggaacacacactggcagctgtggacatgtgatgcac
gccacctgctggcaaaagtactttgaagctgtgcagaacaccactcggaatcggctgcat
gcagacctgatcatagacctggagaacggcgagttcatgtgtccactctgcaagtccctc
tgtaacacggtcatccctctgatccctgtggagcccagcaagctcaactatgagagtgcc
gagttagttggtcagcatctcactctcgagcgctggattcagatcatgtcttctcgaatc
agaggactgagaggtacatgggaaacagacaataacggtgaggaagcggtggaggaagca
atggtactttttgatgagagtcaagctgatttcagatccattctcagttttggagttcaa
gagccgccgaagttctctcgcagtatcacagagatgttgggggtctgtgcgaccacagtg
cacagggtgggattgcagaccgctcccaatgacctgtgcccgtacgtgcctgtcatgtca
tggaacacgtgtgcctacaccatccaggccatcgagagcatgttacaggaagaagggaag
gctctttttggatctctccagaacagacagctctctggactcaaagcgttagtgcagttt
tcagcttctcagaggctgaagagcaaacaagcagtcatacagaagcattttgctgatatg
ttagcagtcctggtacctgttcctactgtagaaaatgcaccatcaatattagaagtggac
ttctttcatctactggtggggctggttctgtccatcccagcgttgtatcaggaagaggct
gtagacctgcagccttcagcagtcagcacagcgttcaatcacctctaccttctgcacctg
gtcactatgggacacatgctgcagatcctgctggcttcacacgattgtgctgtaataaga
gggccagaggagggcgatgaggcccaggctgcagctgaactcttctctattgtgtctcaa
cacacagatgggttgagagctggtgtgtctggtttcagtgtagagagtgtaaagagaggt
gttcttcccttcctgcgctgtgctgcactgttctttaattgccttacaggagtgccccct
ccagaggagctgtccggtactgcagaatcacctgaaagtcagctgcctctgctgtgtagt
tacctctccttgccctccaacctgtttcaactgtttcaggagcacagggatgttgtaacc
accttaataaagaggtggtgtggggatacagccatatccaaagccctcaaaggtgaaatg
caaatcatcaggtatcctcgtaagagaaacaggctaataaatcttccagaggactatagt
gtgttgctcaaccaagctagtcacttcaaatgcccaaactcatcagatgacgagcgaaag
cacccgactctgtgtctgctgtgcggggtcatgctgtgtgcacagagcccctgctgtcag
cagcagctgaacggggaggaagtgggagcgtgcacggctcatgccaccatctgtggggca
ggagtgggaatgtttctcagggttcgagagtgtgagatcatcttgatggccagtaagaca
cggggcagtccctatccagcaccttaccttgatgactatggagaaacagaccctcagctt
gggcgtgggaacccgctgcacttgtgtccagagcgctaccgcaagttgcttcatatgtgg
cagcagcattgcatcctggaggaaatcgcccgcagtctggagctcctcaacgtcatgttc
ccctttgagtggcagatgctttaa
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integrated database retrieval system
