Sinocyclocheilus rhinocerous: 107732746
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Entry
107732746 CDS
T04916
Name
(RefSeq) bifunctional endoribonuclease and deubiquitinase ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107732746
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107732746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
RuvA_C
zf-CCCH
CFAP143
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
107732746
NCBI-ProteinID:
XP_016399651
UniProt:
A0A673MJL1
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MQSRCYHKSAGLGQDRPDLHDLQMKVDFFRKLGYSPQEVKAALRKLGLGTDTNAVLGELV
RSGAKAVPSSSSDSDDGGFSLPHQGGSSSRGQDSMMEDTSEPESDLKPIVIDGSNVAMSH
GNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQHILEELERKKILV
FTPSRRVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSF
VNDKFMPPDDPLGRHGPNLDNFLRKKVMLLDHKRQLCPYGKKCTYGIKCKFYHPERTSQS
QRSLADELRENARRSGSKEDSRVTGPLRGMYPRNDPGFGSCSPSLEQELEQKLNLDPKSS
DGRDVMLQYWDDILSTKKPLYTATVGQRSALADRTSLLAPYPTNPSSIFSSDSGLGSYQS
QFSDPSQSIELHRMRSNHSPMSGNPGVPAGGQCYYDNMSPFSNHQPKFGACGSLPLPNPV
QHYSLPAYGAWSYPFFLPQATSLPEPIPCPSSHMSPGVYGSQKHSGMPQSNAFQEEREEV
RKKLHAIFNPHHVNKVMEMFPQLKDAQQLAAEVLKLKSRGEFF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgaggtgttaccataaatccgctggcctgggccaagacagacctgacctccat
gacctgcagatgaaggtcgacttctttcgtaagctgggctactctccacaagaggtgaag
gccgccctgaggaagctcggcctggggacggacaccaacgcggtgctgggggagctggtg
cgttcaggggccaaggccgtgccctcctctagctcagacagtgatgatggtgggttcagt
ttgccccatcagggaggaagctcatctaggggacaggactcaatgatggaggacacctct
gaacccgaaagtgacctgaaacctattgttattgatggcagcaacgtggccatgagtcat
gggaacaaggaagtgttttcctgccgtgggattgagctggcagttaattacttccttgac
cgaggacacagaaatatcactgtgtttgtgccttcctggagaaaagagcagcccagacct
gatgtacctatttcagatcagcatattttggaagagctggaaaggaagaagattcttgta
tttacaccttcacgaagggtcggaggaaagcgtgtggtctgctatgacgatcggtttatt
gtcaaattagctcacgatctggatggcattatagtgtcgaacgacacatatcgtgacctg
caaagcgaacgtccagagtggaaacgttgcattgaggagagattgcttatgtactccttt
gttaatgacaagtttatgccacctgatgaccctctcggtcgtcatggacccaatttagat
aattttcttcggaaaaaggtgatgttgcttgaccacaagcgacaactctgtccatatgga
aaaaaatgcacatatgggatcaagtgtaagttctaccacccagagcgcacaagccagtca
cagcgttctctagccgatgagcttcgagagaatgccagacggtctggttcaaaagaggac
agcagagtaactgggccactaagaggcatgtacccaagaaatgaccctggttttgggtcc
tgctcaccctccttggagcaagaactggaacaaaagctcaacttggatcccaagagctct
gacggcagggatgttatgctccagtactgggatgacattttgtccacaaaaaagccctta
tatacagccacagtgggacaacgcagtgctttggcagacagaaccagtctgctagcacct
tacccaacaaacccttcgtccattttcagttctgactcagggcttggatcctaccaaagc
cagttttcagatccatcccagagcattgagttgcataggatgagatccaatcattcacca
atgtctggtaaccctggtgtacctgcaggtggccaatgctactatgacaacatgagtcct
ttctccaaccatcagcccaaatttggtgcctgcggctccctacctttgcctaaccctgtc
cagcattacagtcttcctgcttacggtgcctggtcttaccctttcttcttaccacaggca
accagtttacctgaacctataccctgtcctagctcgcacatgtctcccggtgtctatgga
agccagaagcactcaggcatgccacagtccaatgctttccaggaagaaagagaggaggtc
aggaaaaagcttcatgcgatttttaacccgcatcatgtaaacaaagttatggaaatgttc
ccgcagctgaaagatgcgcagcagttggcagcagaggttctcaaactcaagtccagggga
gagttcttctga
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