Sinocyclocheilus rhinocerous: 107733007
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Entry
107733007 CDS
T04916
Name
(RefSeq) mRNA-decapping enzyme 1B-like
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107733007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107733007
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107733007
mRNA degradation factors
5'-3' decay
Decapping complex
107733007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
107733007
NCBI-ProteinID:
XP_016399998
UniProt:
A0A673H7G1
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MTASTGGGGSCLSMSLSALKRLDPYISSITDLASQVALYTFNNTTNEWEKTDVEGALFVY
NRLASPRHGFTILNRLSMDNLTEPITKDLDFQLQHPFLLYRNARLSIYGIWFYDKEDCQR
IAELMKNLAGQEQQLQPQMAIGSVSPRSAEQGVDIMQMLTKARDDYDKGKLSEPKEIGSG
AVIYGNPHLIKPIPLKPAQDTHIQGQTQQDTEMDSKHLSVVTLFGAQSKPDSVSPQPTSA
VSRVGPTRSAVACSLSYDDPSLAGGAVVSNTPMQHCLAIHKLMSGSLLQPLSESPQSRLC
ENGAVQNQPDPIQKLLMNPLPVAGTPGMPSLQLNQGESGVGPQIHPKAKASGPAPAQHLL
YVPNKAPPAGVAGNMVSPHELLQRLTLVQQEQELHPHQELLQPSLTTSSSSLSKTNSTQV
SSPQRIPATVAPTLLLSPSMFTRTKATRAEPEPVEPRALSKTQLQATLLHLIKNDASFLD
TIYEAYVSRLATDSSSKPF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaagcacaggtggcggcggcagctgtttatccatgagtctgtctgccctaaag
agactcgacccatacattagcagcatcacagacctggccagtcaagtagcactttacacc
ttcaacaacaccactaatgaatgggaaaagacagatgtggagggagctctgtttgtctat
aacagacttgcctcccccaggcacggcttcaccatcctgaatcggttgagcatggacaac
ctgaccgaacccatcactaaagacttagatttccagctgcagcatccatttctcctgtac
aggaacgctcgcttgtccatctacggcatctggttctacgataaagaagactgtcagcgt
atagcggaactcatgaagaatttggcagggcaggaacagcagttacagccgcaaatggca
attggctctgtctctccgcgatcagcagagcagggtgtggatataatgcagatgctcact
aaagcacgagatgactatgataagggaaaactcagcgagccaaaagaaattggcagtggt
gctgtcatctatggaaacccccatttgatcaaacccattcccctcaaaccagcacaggac
acacacattcagggtcaaacgcagcaggatacagagatggactcaaagcacctctcggtt
gtcactttgttcggtgctcagtcaaaaccagactctgtctcgccacagcccacctctgct
gtcagcagggtgggtccaacgcggtctgcggtggcctgctcgctgtcttatgacgaccct
tctctggcaggtggcgccgtggtgtccaacacccccatgcagcactgtctagccatccac
aagctcatgtctggttcgctgctgcagcctctgtctgaatccccacagagtcgtctgtgt
gaaaacggggcagtccagaaccagcctgacccaatacaaaaactgctaatgaaccctctt
cctgtggccgggactccagggatgccttccttacagttaaatcagggagaaagtggggtg
gggccccaaatccaccctaaggctaaagcctcagggccggccccagctcagcacttgctc
tatgtcccaaataaagcaccccctgctggagtggcagggaacatggtgtcgccacatgag
cttctgcagaggctcacattggtgcagcaggagcaagagctccatccccatcaggagctc
ctacagccgagtctgaccaccagcagctccagtctcagtaaaactaattcgacacaggtg
agctcaccacagcgtatcccagcgactgtagcccccaccctccttctgtcacccagcatg
ttcacccggactaaagccacgagagcagaaccagaaccagttgaacccagagcacttagc
aagactcagctacaggccacgctgctccacctcatcaagaatgatgcctcattcctggac
accatctatgaagcatatgtctcccgtctcgcgacagactccagctcaaaacctttctga
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