Sinocyclocheilus rhinocerous: 107733012
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Entry
107733012 CDS
T04916
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107733012
04131 Membrane trafficking [BR:
srx04131
]
107733012
04121 Ubiquitin system [BR:
srx04121
]
107733012
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107733012
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
107733012
Membrane trafficking [BR:
srx04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107733012
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107733012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
AraC_N
DZR
Motif
Other DBs
NCBI-GeneID:
107733012
NCBI-ProteinID:
XP_016400002
UniProt:
A0A673I7J7
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MDHSDNDMQGTDGPLGGPDVRRRIPIKLLPKQARNKPAPRPQRPAGRLPSKAHSGEEEGF
NFKQEDRFDCGVKAGDAFASQRRFPQQLYWDYKLNLIGEKDETPAHFCDKCGLPIKTYGR
MIPCKHVFCYECALHHERKGDKMCPGLNMYSCTDPVQRIEQCQRGFLYMCSIVQGCKRTY
LSQRDLQAHINHRHMRSSKNSSSRSDSLHLPPASEVSNRFRVPPPHLPKPHVLIPPPLAH
PGRDPYSQPPSSSHDDLRPTQGQPPGDMGPSRSLPQETFRISTVTTRKHSNLITVPIQDD
SASSGPSRDPLPHPGNAPPPHHHPGDYPGQPVVTHPHHMMAPPQQHYGPPPPPPPISHPM
PHPGQGSNTPHMVFNQAPPPLSSVPPPITPPPGHLIGQMPPFMNHPPPGPPPQHGGPPVS
APPPHHYNPQFPEDKSTLSPPFNQPGGLSPGMWPAPRGPPPRMQGPPPQGQMPGPHHPDQ
GRYRPYYQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaccacagtgacaatgatatgcagggtacggatgggccgttaggtggtcctgatgtc
agaaggaggatcccaatcaaacttcttcccaaacaggccaggaataaacctgccccacga
ccccaaagaccagcgggacggttaccgtccaaagcccattctggagaggaagaagggttt
aatttcaagcaggaggaccgatttgattgtggcgtgaaagctggagacgcatttgcgagc
cagcgtcggttcccacagcagctgtactgggattacaagctaaatttgatcggtgaaaaa
gatgagacacctgctcatttctgtgacaaatgtggactgccaattaagacatacggccgt
atgatcccatgtaagcacgttttctgctatgagtgtgcattacatcatgaaaggaagggt
gataagatgtgtccaggtctaaacatgtacagctgtacagacccggttcagcggattgaa
cagtgccagcgtggctttctctacatgtgtagtatcgttcagggttgcaaacgcacctat
ttgtcccagagagacctgcaggctcacatcaaccaccggcacatgcggtccagcaagaac
tccagcagccgctctgactctctccaccttcctcccgcctcggaggtgtccaaccgcttc
cgtgtgcccccgcctcacctgccaaagccccatgtgctcatccctcctcctctggctcat
ccaggacgcgacccctacagtcagcctccctcttcctcccatgatgatctccgacctacg
caaggccaaccgccaggagacatgggaccatcccgctctctccctcaggagaccttccgc
atctcgactgtcaccacgcggaagcacagcaacctcatcacggttcccatccaggacgat
tccgcgagctccggaccatcccgtgaccccctcccccaccccggcaatgctccccccccc
catcatcacccaggagactatccaggtcaacccgttgtgacccatccacatcacatgatg
gcacctcctcagcagcactacggccccccgccgccccctcccccaatcagtcaccccatg
ccgcacccaggacagggctcaaacacacctcacatggtttttaaccaggcccctcctcca
ctgtcatctgttccccctcccatcaccccgcctcccggacacctcattggtcagatgccc
ccctttatgaaccatcctcctccagggccgccccctcagcatggcggtccccctgtcagt
gcaccgcctccccaccattacaacccccagtttcccgaggacaagagcacactcagccca
ccattcaaccagcctgggggcttgagtccaggaatgtggccggcacccaggggtccccct
cctcgaatgcagggtccccctccacagggacagatgccggggccacatcaccccgatcag
ggccgctacagaccgtattaccagtaa
DBGET
integrated database retrieval system
