Sinocyclocheilus rhinocerous: 107733148
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Entry
107733148 CDS
T04916
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107733148
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107733148
Spliceosome [BR:
srx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107733148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
107733148
NCBI-ProteinID:
XP_016400158
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MELELSTDVEELSETSETQDIDTDDLLELNQFDGLPFSSRYYKLLSERKGLPVWGAKCEF
MDSLMSSQVVIVTGTAKTGQSTQIPQWCAEFCLSAQYQNGMVVCTQIHQQSTVELALRVA
DEMDVNIGNEVGYSIPLQTCCSPDTLLRYCTDDVLLREMMSDPLLEQCGVVVIDQAQERT
VSTDLLLGLLKDVLLTRPELRLVILSTPHSAEKLLRRYGSVPQICLEGPRPCEVVYGSGR
GGVKDYLCSALRLALEIHQNQKHGDIVTFLATEQEIECAHAILRREGANLALSHGELVPV
SLCPAQGDRLSVLSEGSKSRRVFLTCSPSEDLFWAIHSIRFVIDAGVQKRYVYNPRIRAN
SIVIRPISKSQAESRKQLAGPTGKCFCLYQEDTPLPAENIPHILESDITSTVLFLKRMEI
AGLSHCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKTLLASC
EFDCVSEVLTIAAMLTAPSSFLTPPVELRQKALLCHKRFQHAEGDHFTLINIFNAYKYAK
EGSYSNVEQWCEDHFLSLSALQTADAIRSELTEILKRLELPVSLPAFGSKSNSLNIKHAL
LAGFFMQVARDIDASGNYFMLTHKHVAQIHPLSGYGTEMHKKNLPEWVLYHEHTLSENNC
IRTVSQISAYEFIQMAPQYFFYNLPPSESKDILQHIINHGSAAPSKGKRKSQPPSSPASE
EQSHERCTIQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagctatcaacagatgtggaggaactatctgaaaccagcgaaactcaagat
attgatacggatgatctgctggagttaaatcagttcgacgggctccctttttcttcaaga
tattacaaactattaagcgaaagaaaaggtctgccggtgtggggagcgaaatgcgagttt
atggacagtttgatgagcagccaggttgtgatagttactggcacagctaaaacaggacaa
agcactcagatccctcaatggtgtgcagagttttgcctgtctgcgcagtatcagaatggc
atggtagtgtgtactcagattcaccagcagagcactgtggaactggccctccgtgtggcc
gacgagatggacgtcaacatcggcaatgaggttggatacagcatcccacttcagacctgc
tgctcccctgatactttactgagatactgcacagatgatgtgttgctccgggaaatgatg
tcggaccccctcttggagcagtgtggtgtggtggtcattgatcaggcccaggaacgcacc
gtcagcacagaccttctcctcgggctgctcaaagacgtgctcctcacacggccagagctc
aggctggtcatcctcagcacccctcactccgcagagaaactgctacgtcgctatggaagt
gttcctcagatctgtctggaagggcctcggccgtgcgaggtggtgtacggcagtgggaga
ggaggtgtgaaggattacctctgctctgctcttagactggctctggagatacatcagaat
caaaagcatggagacattgtgacatttctggcaactgagcaagagattgaatgtgcccat
gccattttgcggagagagggtgccaatcttgcattgtctcatggtgagctggtgcctgtg
tctctgtgccctgcgcaaggagaccgtctctcagtgctctctgaagggagcaagagtagg
agagtcttcctcacctgcagccccagtgaagacttgttctgggccattcacagcattcgc
tttgtgattgatgctggagtgcaaaaaagatatgtgtacaatcctagaatcagggccaat
tccattgttattcgaccaatcagcaagagccaagctgagagccgcaaacaacttgcaggc
ccaacaggcaaatgtttctgtttgtatcaagaggacacgccacttcctgctgagaacatc
cctcatattcttgagtctgacatcacttccaccgtgctcttcctgaagcgcatggaaatt
gctggcctgagccactgtgacttcattgacagaccggatccagaggggctcatgcaagct
ttagaggaacttgactatcttgctgctttggatgatgacggaaatctgtccgagattgga
attatcatgtcagagtttcctctcgagccacagatggctaagactttgcttgcgtcttgc
gaatttgactgtgtgagtgaagtgctgaccatcgctgccatgctaacagctccaagcagt
ttccttacacccccagtggaactgagacagaaggccttactgtgtcataagaggttccag
catgcagagggagaccacttcacccttattaacatctttaatgcttacaaatatgctaag
gaagggtcatactctaatgtggaacaatggtgtgaagaccatttcctcagtctgtctgct
cttcagacagcagatgcgatacgctctgagctaacagaaatcctgaaacggctagagctg
ccagtgtccttacctgcctttggctctaaaagcaacagcttgaacatcaaacatgcccta
ctagctggcttcttcatgcaggtggcgagggacattgacgcgtcagggaattacttcatg
ctgacccataaacatgtggctcagatccacccactgtctggctacggaaccgagatgcac
aagaagaacctgccggaatgggttctgtaccatgagcacacgctgtcagagaacaactgt
atcagaaccgtctctcagatctcagcatatgagttcattcagatggcgccgcagtacttc
ttctacaacctgccacctagtgagagtaaagacatactgcagcacattataaatcatggt
tcagccgccccatctaaaggcaaaagaaaatcccagccccccagcagccctgccagtgaa
gagcagagccatgagcgctgtaccatacaatga
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