Sinocyclocheilus rhinocerous: 107733561
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Entry
107733561 CDS
T04916
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107733561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107733561
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107733561
mRNA degradation factors
5'-3' decay
Decapping complex
107733561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EDC4L
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Prp19
Pdc1_Ge1
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
107733561
NCBI-ProteinID:
XP_016400714
LinkDB
All DBs
Position
Unknown
AA seq
1431 aa
AA seq
DB search
MASGSNMDIEGATQHLRDILKLDRPGNSAEPSLVESQRKPSFNGELNGVLGADLIGAGGL
ATMVEPTAHYSDKLNGQDTQTICLSGDDGSTCVPIRAINVEIVSSHDSSIDSKARGSNKV
KIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLRLGSTERSLLKGFTGAV
TDLAFAHLDSTVLGCVDEAGNMFIWQLTSHSSKIHDEVIVHIRRPEDTPLNSNRRLIWCP
FIPEDNDENPEDACQTLALLHEDRAEVWDLDILRSNNSSWPVDATELKEGFITIRGHTAR
ISEGALSPDGTVLATASHDGFVKFWQIYIEGQDQPRCLHEWQPHNGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPFNSSVLPSLKASLDLSAEF
LILSDVQRKVLYVMELLQDQEKGCASFTAVSEFLLTHPVLSFGVQDVARARLRHTEVLPP
DEESESMTTEGNQGPSESKSGIQIKLYCVHTKSLQDVQIWFQPNQGASSSLFMPQSGSQD
GFGFSDPLADLNVEAMSSDKESGDSGSQNDLSKILALPTPADFMSPAPSALPKLMTPDAF
MMPSASMPASPGSSASSLTIVTAMSSSDSGARGGDDLAQSPKMSVECGNSSLTLNASAGS
PRSNSILISGLGENIQAFSPPLVLSTSLLREASLLCEAAPYSHRLPLPYFPSPLPQVSPP
NPPLSLDLQAIDPMVVPQASPTRARSPDVISSASTAMSLDIPEIASETLQRGLAGAAADS
GPVLHSDSMASAASVLHLLSPRARSSAEHSLLPLELGAASVDGEQRLNNTPSLLETALSQ
ENAVAAGGSCLESSVNHTWPAAPDITRETRNSLRDNGLGDCSREEIKDRHISSPYHRRTY
HLTQNDSQDASAEQSDHDDEVASLASSSGNCGPRSSHRLPVKDWKTSPRSSPKLKRKSKK
DEGESSQSRQIENQMSTEVQDELLQMLRSQQREIAELRQNQLDILQRVTSHMDAVQSSIM
AHIEHAMLAQQEQEQRRMERILAEGQSRNQQLQDQLVQQLVQTLNNSLCNRLDKVLREEM
KKTVPQAISKSLDPVTGQMSSTIAAKLTAVEGTLKENVTKVVKSKNTTDAIGRAAAEAMQ
GPIQAAYKETFQSIVLPVFERGCQSMFQQINDSFKQGTNEYIQQLETHIKNRKQRDQDAR
DPVIGQLQQMIDTLQNSQDQLATTVTASVCSDVQHQLHMIVGNLQDSILTQVQRIVKGEV
SLAMKEQQAAVTSSIMQAMRSAAGTPVPSAHLDYQAQQASILQLLQQGQLNEAFQQALSA
ADLNLVLYVCETIDSQQVFGQQPCPLHQAVLLSLIQQLSTNLSTRTELKISYLEDAVMNL
DHGDPVTRDHMSAVLSQVRQKLLHFLQQDAHSPLCKRARRLMMMLQGLVNH
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggttccaacatggacatagagggcgcgacccagcaccttcgggacatctta
aaactggatcgtcccggtaattcggccgagccctctttggtagagagccagagaaaacca
tctttcaatggagagttgaatggcgttcttggagcggatcttattggagcaggaggactt
gcgacaatggtggagccaactgctcactactcagacaaacttaatggacaggacacacag
actatctgcctttcaggagacgatgggtccacctgtgtccccatcagagcaatcaatgtt
gaaattgtatccagtcatgactctagtattgacagtaaggctcgtggcagcaacaaggtt
aaaattcagccagtggccaaatatgactgggagcacaagtactactatggcaatttaata
gccgtgtccaactcatacttggcttatgccatcagaggcgcaaacaatcattctatgatc
cgagtgctgcggctgggatcaacagagcgttcgctgctgaagggcttcaccggtgcagtc
acagaccttgctttcgcccacttggactccaccgttttgggctgcgtggatgaggctgga
aacatgttcatttggcagctcactagccacagcagcaaaatacacgatgaagtgatcgtt
cacatccgaaggcctgaggacaccccactaaattccaaccgcagactcatctggtgtccc
ttcatcccggaggacaatgatgagaacccagaggatgcgtgtcagacactggcactcctt
catgaagacagagctgaggtttgggaccttgacatcctccgatccaataacagctcatgg
cctgtggatgccacagaactgaaagagggcttcatcaccattagaggacacacagcacgc
attagtgagggagctctgtcccctgatggcacggtcttggccacagccagtcatgatgga
tttgtaaagttttggcaaatctacattgaaggacaggaccaacccagatgcctgcatgaa
tggcagccacataatggacggcctctttcctgcctgctcttttgtgacaaccacaagaag
caagacccagaagttcctttctggcgcttcctgatcactggagctgatcagaaccaggaa
cttaagatgtggtgcacagtgtcatggacgtgcttacaaactatcaggttttcccccgat
ccattcaacagcagtgtactacccagcctgaaggccagtttggacctgtctgcagaattt
ctcattctcagtgatgttcagaggaaggtgttgtacgtcatggagctgttacaggatcag
gaaaaaggctgtgccagcttcactgcagtttcagagtttctgcttacacaccctgtgctc
agcttcggcgtacaggatgtcgcacgcgccagactgcgccacacagaagtccttccccct
gatgaggaaagtgaaagcatgacgacagaaggaaaccagggaccctcggagtccaaatca
ggaatccagattaaactctactgtgtgcatacaaaatcactacaggatgtgcagatctgg
ttccagcccaatcagggggcctcttcctccctcttcatgccacagtctggatcacaggat
ggctttggtttttctgacccactggctgatctgaatgtggaggcaatgagctctgataaa
gagtctggtgatagtggatcacagaatgacctgagtaagattctggctcttccaactcca
gctgacttcatgagtccagccccatcagccttgcccaaactcatgaccccagatgccttc
atgatgcccagcgcctccatgcctgcttctcctggcagcagtgccagcagcctgaccata
gtcacggccatgagcagctcagatagcggtgcaagaggtggagatgatctggcccagagc
cctaaaatgtctgtcgaatgtggcaacagcagcttgactctgaatgccagcgcaggcagt
ccaagatccaactctatcctcatctcaggccttggggaaaatatccaggctttctctccc
ccacttgtgctctccacatccctcctgcgagaggcctctctgctctgtgaagctgctcct
tattctcacagacttccccttccttatttcccatctcctcttccacaggtttcccctcca
aaccctcctctctccctggatctccaggccatagaccccatggttgtcccccaggcctct
ccgaccagagctcgctctccagatgtcatctcctctgcttctacggcaatgtccctggac
atccccgagatcgcctcagagaccctgcagagggggctggccggtgccgctgctgactcg
ggccctgtcctgcattctgacagcatggcatcagccgcatcagtcctccacctgttgtct
ccaagagcccggagcagtgctgagcacagtttgctgcctctggaattgggtgcagcatct
gtggatggagaacagagactcaataacacaccctccctgctggagacggctctgtcgcag
gagaacgcagtagcggctggaggatcctgtttggaaagcagcgtgaaccacacctggccc
gcagcacctgatatcacacgagaaactcgcaacagcctgagagacaatggtttgggagac
tgctctagggaggaaataaaggacagacacatttcttctccataccacaggcgcacatat
cacctgactcagaacgatagtcaagatgcaagtgcagagcagagtgatcatgatgatgag
gttgccagtctggcctcctcctcgggaaattgtggccctcgctcctctcacagacttcct
gtgaaagactggaaaacatctccccgcagctcccctaagctcaagaggaagagcaagaag
gatgaaggagagtcctcacagtctagacagattgagaaccagatgagcacagaggtgcag
gatgagctcctacagatgttacggagccagcaaagggagatcgctgagctgagacagaac
cagctggacattctacagagagtcaccagccacatggacgctgtgcagagctccatcatg
gctcacattgagcacgccatgttggctcagcaggaacaagaacagagaagaatggagaga
attctggctgaaggacaaagccggaaccaacagctccaggaccagctggttcagcagctt
gtccagacactgaacaacagtctctgcaatcggctagacaaagttttgcgtgaagaaatg
aagaagaccgtcccacaggccatatcgaagagtctagatcctgtgactggccagatgagc
agcaccatcgctgccaagttaaccgcagtggaaggaacactgaaggaaaatgtcaccaaa
gttgttaaatccaagaacactacggatgctatcggtcgtgctgctgcagaggccatgcag
ggccccatccaggcggcctacaaagagaccttccagagcatcgtgctgcccgtgtttgag
agaggctgccagtccatgtttcagcagatcaatgacagcttcaaacagggaaccaacgag
tacatccaacagctggagacacacatcaagaacaggaaacagcgggaccaggatgcacgg
gatcctgtgattggccagctgcaacagatgattgacactctccagaattctcaagaccag
ctggccaccactgtgacggccagcgtgtgctctgacgttcagcatcagctccacatgatc
gtgggaaatctgcaggactcaatcctgacgcaggtgcagcgcatagtgaagggagaggtg
agtctggccatgaaggagcagcaggcagctgtcacctccagcatcatgcaggccatgcgc
tcggccgcaggaacacctgtaccgtccgcacatctggactaccaggcccagcaggccagc
atactgcagttactacagcagggccagctcaatgaggccttccaacaggctttatctgca
gcagacttgaatctggtgctgtacgtgtgtgagaccattgactcccagcaagtgttcggc
cagcagccctgtccactccatcaggccgtccttctgtctctcatccagcagctctccacc
aacctgagcacacgcacagaactcaagatcagctatcttgaagatgctgtgatgaacctg
gaccatggagatccagtcaccagagaccacatgtctgcagtgctgtcccaggtacgacag
aagctgttacacttcctgcagcaggacgcccacagccctctttgcaagcgtgctcggcgc
ctcatgatgatgctgcagggcctggtcaatcactag
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integrated database retrieval system
