Sinocyclocheilus rhinocerous: 107734400
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Entry
107734400 CDS
T04916
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107734400 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107734400 (nup54)
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107734400 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
107734400
NCBI-ProteinID:
XP_016401835
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MAFNFGGASSNASAFGGFGSTSSAGAGTNFNFSTPSNTGASLFGNTQNKGFGFSSGLGSS
APAGMGFGGALGSTGLGFGGFGGIQPAQNQQGGMFNQQASQSSQLFNTASALSAPSVLND
ERDSILARWNQLQAFWGVGKGYYSSSTPPVEFSQENPFCRFKAVGYSCVPDVKDEDGLVA
LALNKKEADVRSQQQQLVESMHKVLGGNPTLSVNVEGVRALPDDQAEMIIYLVERSPNGT
SKRVPASTLYSYMEQMNVKSVLQQLGVIMAVSRTALTPAQLKQLLQNPPAGVDPIIWEQA
KVDNPDPEKLIPVPMVGFKELHSHSLIHTLASAACPSVQHTHSLFPSVLSCVFQVLIKQE
VQRKSGYAIQLDEEHLRVQLETIQSDLNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYR
VDADLLREIKQHLKHQQEGLSHLISVIKDDLDDIKTIEDGLHDSVHGRSSKLS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaacttcggcggcgcgtccagcaacgcgagtgcgttcggggggttcggctcc
acctcctccgccggcgccggcaccaacttcaatttctccacgccgtcaaacacaggtgcc
agtctctttggaaacactcagaataagggcttcggcttctcgtcaggtctgggctccagc
gcaccggcggggatgggcttcggcggcgctctgggcagcactggactgggcttcggagga
ttcggtgggatccagcccgctcagaaccaacaaggaggcatgtttaaccagcaggcgtct
cagtccagtcagctctttaacacagccagcgctctctctgctccatcggtcctcaacgac
gagcgcgactcaattctggcccgatggaaccagctgcaggccttctggggagtagggaag
ggttactacagcagcagcacaccgccggtggagttcagccaggagaaccccttctgccgc
ttcaaggcggtgggctacagctgtgttccggatgtgaaggatgaggatggtttagtggct
ctggctctcaataagaaggaagctgacgttcgctctcagcagcagcagctggttgaatcg
atgcacaaggttctgggaggaaatccgactctttcggtcaacgtggagggagtgcgagca
ttacccgacgatcaggcggagatgatcatttatctggtggagcgctctcctaacggcacg
tcgaagcgagtcccggcgtccacgctctacagctacatggagcagatgaacgtgaagtct
gtgctgcagcagctgggtgtgatcatggcggtcagtcgcaccgcactgaccccggcgcag
ctcaagcagctgctgcagaacccgcccgcaggtgtggatcccatcatctgggaacaggcc
aaagtggacaatccagacccagagaagttgattccggtccccatggtgggcttcaaagag
ctgcactcacactctctcatacacacactcgcgagcgccgcatgtccttcagtacagcac
acacactctctattcccgtctgttctttcctgtgtgttccaggtgttaattaaacaggaa
gttcagaggaagagcggttacgccattcagctggatgaggaacacctgagagttcagctg
gaaaccatccaatcagacctcaacgcaccgacacagttcaaggggcgactgaatgaactc
atgtctcagattcggatgcagaatcattttggagctgttcgttcagaagagcgttaccgt
gttgatgccgacctgctgagagaaatcaaacagcatctgaagcaccagcaggagggtttg
agtcacctgatcagcgtcattaaagacgacctggacgacatcaagacgattgaagacggg
cttcacgacagcgttcacggacgcagcagcaaactcagctga
DBGET
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