KEGG   Sinocyclocheilus rhinocerous: 107734447
Entry
107734447         CDS       T04916                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107734447 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107734447 (exosc8)
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     107734447 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 107734447
NCBI-ProteinID: XP_016401896
UniProt: A0A673LYR0
LinkDB
Position
Unknown
AA seq 358 aa
MGVVLNYGINSYISIVELYFQSQRNTYAEAVFTNHIITAGEEHAAPQSAGWETALAPHTG
AEDARVTSLRHCSLHVVLLNIMAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNI
SSISTADGSALVKIGNTTVICGIKAELTMPPSDAPNKGYIVPNVDLPPLCSSRFRPGPPG
EQAQAASQFIADVIESSDLINREELCIEKSKLCWVLYCDIMCLDYDGNLLDACIIVLLAA
LKNARLPEVTINKETDLAEVDIQKKRHLKISRHPVGSSFVIFDDSIIIVDPTAEEESLST
ALLTVVTDEEDRLCAVHKPGGTSLSGEKLQHCINRAITRNKEISKLVDKVIESMKTAK
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgggtgtcgtactaaattacggaataaatagttacatctccattgttgaactttacttc
cagtcacagagaaacacctacgcggaagccgtctttacgaaccacatcatcacagcgggc
gaagaacacgcagcgccgcagagcgccggatgggaaacagcactagcgccccacactgga
gcggaggacgcgagagtcacgtctttacgtcactgcagtcttcacgtggtgcttctaaac
atcatggcggctggtttcaaaaccgcagagcctctagaatatcacaggagctttctgaaa
gaaaactgtcgtccagatggaagggaattgggagagttcagacccacaaccttaaatatt
agctctatatctacagctgatggatcagcactggtgaaaattggaaacaccacagtgatc
tgtgggatcaaagctgaattgactatgccgccatctgatgctccaaataaaggatatata
gtcccaaatgtagatctgcctccactgtgctcatctagattcagacccggtccaccagga
gaacaggctcaggctgccagccagtttatcgcagatgtcattgaaagttcagatttaata
aatagggaggaattgtgcattgaaaaatctaagctttgttgggtgctgtactgtgatatt
atgtgtttggattacgacgggaacttacttgacgcctgtatcatagttctgctggcagct
ttaaagaacgcccgactccctgaagtcactataaacaaagagacagatttagcagaagtt
gacatccagaagaagaggcacttgaagatcagccggcatccagttggctcatcatttgta
atatttgatgactctataatcatagtcgaccctacagcggaagaagaaagcctgtcaaca
gcattactgactgtggtaacagacgaggaggatcgactctgtgccgtccacaaaccaggt
gggacgtcgttatctggtgagaaactgcaacactgcataaatcgagccataacgagaaac
aaagaaatcagcaaactggtggacaaagtcattgagagcatgaagacggcgaaataa

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