Sinocyclocheilus rhinocerous: 107734447
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Entry
107734447 CDS
T04916
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107734447 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107734447 (exosc8)
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107734447 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107734447
NCBI-ProteinID:
XP_016401896
UniProt:
A0A673LYR0
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MGVVLNYGINSYISIVELYFQSQRNTYAEAVFTNHIITAGEEHAAPQSAGWETALAPHTG
AEDARVTSLRHCSLHVVLLNIMAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNI
SSISTADGSALVKIGNTTVICGIKAELTMPPSDAPNKGYIVPNVDLPPLCSSRFRPGPPG
EQAQAASQFIADVIESSDLINREELCIEKSKLCWVLYCDIMCLDYDGNLLDACIIVLLAA
LKNARLPEVTINKETDLAEVDIQKKRHLKISRHPVGSSFVIFDDSIIIVDPTAEEESLST
ALLTVVTDEEDRLCAVHKPGGTSLSGEKLQHCINRAITRNKEISKLVDKVIESMKTAK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgtactaaattacggaataaatagttacatctccattgttgaactttacttc
cagtcacagagaaacacctacgcggaagccgtctttacgaaccacatcatcacagcgggc
gaagaacacgcagcgccgcagagcgccggatgggaaacagcactagcgccccacactgga
gcggaggacgcgagagtcacgtctttacgtcactgcagtcttcacgtggtgcttctaaac
atcatggcggctggtttcaaaaccgcagagcctctagaatatcacaggagctttctgaaa
gaaaactgtcgtccagatggaagggaattgggagagttcagacccacaaccttaaatatt
agctctatatctacagctgatggatcagcactggtgaaaattggaaacaccacagtgatc
tgtgggatcaaagctgaattgactatgccgccatctgatgctccaaataaaggatatata
gtcccaaatgtagatctgcctccactgtgctcatctagattcagacccggtccaccagga
gaacaggctcaggctgccagccagtttatcgcagatgtcattgaaagttcagatttaata
aatagggaggaattgtgcattgaaaaatctaagctttgttgggtgctgtactgtgatatt
atgtgtttggattacgacgggaacttacttgacgcctgtatcatagttctgctggcagct
ttaaagaacgcccgactccctgaagtcactataaacaaagagacagatttagcagaagtt
gacatccagaagaagaggcacttgaagatcagccggcatccagttggctcatcatttgta
atatttgatgactctataatcatagtcgaccctacagcggaagaagaaagcctgtcaaca
gcattactgactgtggtaacagacgaggaggatcgactctgtgccgtccacaaaccaggt
gggacgtcgttatctggtgagaaactgcaacactgcataaatcgagccataacgagaaac
aaagaaatcagcaaactggtggacaaagtcattgagagcatgaagacggcgaaataa
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