Sinocyclocheilus rhinocerous: 107734484
Help
Entry
107734484 CDS
T04916
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107734484 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107734484 (prpf40a)
Spliceosome [BR:
srx03041
]
Complex A
U1 snRNP components
U1 related factors
107734484 (prpf40a)
Complex B
107734484 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
107734484
NCBI-ProteinID:
XP_016401943
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MVVFFICHKLYSMAPMPPGIMPPMIPPMGAPPMAQMPAMMPPMMPGMMMPPRMPAASIQP
TGPPGVSPVESAAPAAPGTTSTTSTESSPDEQTKKKSVWTEHKSLDGKTYYYNTETKQST
WEKPDELKSPAEQMFSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEEN
GTADVVAPGTTPALTSQSESAVTVAAVAETEVAMATVATEEQPSHVPAQVAEVSSDVTVN
STEEAPSVETQPSNDVSKEERPELVKKVYKWNTKEEAKQAFKELLKEKGVSSNASWEQAM
KLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTS
TTRYKKAEQMFGDQEVWSCVPERDRLEIYEDVLFYLAKKEKIIYILDNMANVTYRTTWSE
AQQYLLDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNRE
AFQKFLDELHDHGQLHSMSAWMEMYPTVSADIRFNNMLGQPGSTPLDLFKFYVEDLKARY
HDEKRIIKDILKDKGLLVEINTGFEEFGSVISSDKRATTLDAGNIKLAFNSLLEKAEARE
REREKEEARKMKRKEAVFKSMLKQATPPLEPEATWEGVRERFLKEAAFEDITLESERKRI
FKDFMHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDEYHSKKKKRSASKSP
SEHSSSGESERSCKKSKKHKKKGKKRRHKSASPESEGEKERKGREKEKDKENDKSRGKSR
GESKQKSPKRKSTKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgttttttatttgccacaagctctacagcatggcccccatgcccccgggaata
atgccccccatgatacccccgatgggagctccacccatggcacagatgccagccatgatg
ccaccaatgatgccaggaatgatgatgcccccacgcatgccagctgcatcaatccagcct
acaggaccgcctggtgtgagtccagtggagtctgcagcaccggctgctcctggaacaact
agcaccacatcaaccgaatcttcacctgatgaacagacaaaaaagaagtcagtatggact
gagcacaaatcactggatggaaaaacatattactacaacacagagaccaaacaatccacc
tgggagaaaccagatgaactcaaatcacctgcagagcaaatgttctccaaatgcccgtgg
aaagagtataagtcagacaccggcaagccctattactacaactcacagaccaaagagtct
cgctggactaaacccaaggagctggaggacctggaggcgatgataaaggcagaggagaac
gggacggctgacgttgtggctcctggcaccacccctgctcttacatctcagagtgagtcg
gctgttaccgtggcggcagttgctgagactgaggttgccatggcgacagtcgccacagag
gaacagccgtctcacgtgcctgcgcaggtcgctgaggtcagcagtgatgtcactgttaac
tccactgaggaagcgcccagcgtagagacacaacccagtaatgatgtgtctaaggaggag
agacctgagctggtgaagaaagtttacaagtggaacacaaaagaggaggcaaagcaggca
tttaaagaactgctgaaagaaaagggcgtttcctccaatgcatcatgggagcaggcaatg
aagctgataattaacgaccctcgttacagtgctctgcctaagctgagtgaaaagaaacag
gcgttcaatgcttataaagtccagacagagaaagaggaaaaggaagaagccagaatcaaa
tacaaggagtctaaagagactttccagcgcttcctggagaaccacgagaagatgacctca
accacacgatacaagaaagcggagcagatgtttggcgatcaggaggtgtggtcatgtgtc
cccgagagagaccggctggagatctacgaagatgtgctgttttatttagcaaagaaagag
aagatcatctacattttggacaatatggccaatgtgacgtacagaactacgtggtctgag
gcacagcagtacctactggataaccccacctttgctgaagatgaggagctacagaacatg
gacaaggaagatgctctgatctgttttgaggaacacatccgtgctctcgagaaagaggag
gaggaagagaaacagaaaactctgctgcgagagagacgcagacagcgcaagaacagagag
gctttccagaaattcctggatgagcttcacgatcacgggcagctgcactccatgtctgcc
tggatggagatgtacccgaccgtcagcgctgatatccgcttcaacaacatgctgggccag
ccaggctccacccctctggacttattcaagttttacgtggaggatctgaaagctcgttat
catgatgagaagagaatcattaaagacatcctgaaggataagggcttactggtggagatc
aacacgggtttcgaggagtttggctcagtgatcagctcagataaacgcgccacaacgctg
gatgcaggaaacatcaaactggccttcaacagtttgctggagaaagctgaagcacgtgag
agggagagagagaaggaggaggccaggaagatgaagaggaaggaggcggtgttcaagagc
atgctgaaacaggccacgcctcctctggagcctgaggccacttgggagggagtacgagag
cggttcctaaaagaggctgcgtttgaggacatcacgctggagtcggagaggaagaggata
ttcaaagacttcatgcatgtgctagagcacgagtgtcaacatcatcattcaaagactaaa
aaacactcgaagaaatccaagaaacaccacagaaaacgttcccgatctcgatcaggctcg
gagtcagaggatgatgagtatcactcgaagaagaagaaacgctcagcttctaaatctcca
tccgagcactcgtcctctggggaatctgagaggagttgcaagaaatctaagaaacacaag
aagaagggaaagaaaagacgacacaaatcagcctcccctgagtctgaaggagagaaagag
cggaaaggaagagagaaagagaaggataaagagaacgacaaatccagagggaagtcacgt
ggagaatccaaacagaaatcccccaaaagaaagagtacaaaagaagagggtggatgggat
acgtctggaagcgagctgagtgaaggagagctggaaaagaggaggcgtactctcctggag
cagctggacgcaccataa
DBGET
integrated database retrieval system
