Sinocyclocheilus rhinocerous: 107736388
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Entry
107736388 CDS
T04916
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107736388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107736388
Enzymes [BR:
srx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107736388
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107736388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
107736388
NCBI-ProteinID:
XP_016403303
LinkDB
All DBs
Position
Unknown
AA seq
209 aa
AA seq
DB search
MPKRAKKNEEAVEGETGNGAEPAKKEKKGKEPEAPILYEDPPDKMTSKDGRASNMKITSW
NVDGLRAWVRKNGLDWVRKEDPDVLCLQETKCAEKALPSEITDMPEYPHKYWAGSEDKEG
YSGVAMLCKTEPLSVTYGIGKEEHDKEGRVITAEFPSFFLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLSGLDQRKLLVLCGDLNVAHQ
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagagccaagaagaacgaggaagctgtcgagggggagactggcaatggagct
gaacctgcaaagaaagagaaaaaggggaaggagccagaggccccaattctgtatgaagat
cctccagataagatgaccagtaaggatggtcgtgcatccaacatgaagatcacctcctgg
aatgtggacggtctgcgcgcttgggtcagaaagaacggccttgattgggtgcgcaaggag
gatccagatgtgctgtgtctgcaggagactaagtgcgctgagaaagccctgccatctgag
atcactgacatgcctgagtatccacacaagtactgggctggatcagaggataaggagggt
tacagcggagtcgccatgctctgcaagactgaaccactcagtgtcacctatggtattggt
aaagaggaacatgataaagaaggtcgggttatcactgctgagtttccatctttcttcctg
gttacggcgtatgtgcctaatgccagtcgtggtttggtgcgactcgactaccgtaagacc
tgggatgtggatttccgggcctacctgagtggcttggaccagcgcaagctcctggtgctg
tgtggagatctgaatgtggcccaccaa
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