Sinocyclocheilus rhinocerous: 107737158
Help
Entry
107737158 CDS
T04916
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04145
Phagosome
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107737158
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107737158
09144 Cellular community - eukaryotes
04510 Focal adhesion
107737158
09142 Cell motility
04820 Cytoskeleton in muscle cells
107737158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107737158
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107737158
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107737158
Membrane trafficking [BR:
srx04131
]
Endocytosis
Phagocytosis
Opsonins
107737158
Exosome [BR:
srx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107737158
Exosomal proteins of colorectal cancer cells
107737158
Exosomal proteins of bladder cancer cells
107737158
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107737158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
107737158
NCBI-ProteinID:
XP_016404083
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MTGTMHLLAAVSLILTFSSASAESTVYNLLTSPDCLPDLLHGGLAEQGVTELFILTTFRL
QPRTGNTIFSLYNPRDNSKYFEFSVLGKLNKATLRYLRRDGRMSTVTFNNLKLADGEKHR
LLFHLKGLEVGQPGGFPHNQGVLPVPGVELHLDCRLVETLRDLPAVFNGLNNHQGVELKT
MQGKAQEELEELKLAYGDTMENVASLQDCHTHQSDSVQTLGLNTKQLTNQMLELTKVINE
LKDVLIQQVKETSFLRNTISECQACGLGGTEVVKPKCTPGVCFRDDMCIETAEGVECGPC
PDGYTGDGYSCDDVNECQFNPCFPGVRCVNMAPGFRCEACPLGFTGKPLEGVGVAYAQTH
KQACDDIDECKGPDNGGCIPNSICVNSVGSYQCGRCKTGFTGDQIRGCKPEKSCGNRLQN
PCDPNAKCIEERDGTITCQCGIGWAGNGYLCGKDTDIDGYPDEKLRCRDPTCRKDNCVTV
PNSGQEDADGDGKGDACDPDADGDGILNEQDNCWLTPNINQLNSDKDSHGDACDNCIRVD
NPDQRDTDSDGLGDACDDDMDGDGLKNFLDNCQRVKNRDQLDRDGDGVGDACDSCPDIPN
PNQSDIDNDLVGDSCDTNQDSDGDGHQDSKDNCPLVINSSQLDTDKDGLGDECDNDDDND
GIPDILPPGPDNCRLVPNPDQIDDNNDGMGDICESDFDQDKVIDRIDNCPENAEITLTDF
RAYQTVVLDPEGDAQIDPNWVVLNKGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLR
NSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGSELVADSGV
TIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHGMDPL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgactggcacgatgcatctccttgcggccgtttcgctaatcttgactttcagctcagca
agcgcagaatcaaccgtgtataacctcttaacgtcaccggactgcctaccggatctgcta
cacggaggtttggctgagcagggagtaacagaactctttattctcacaacgttccgtctc
cagcctcgaactggaaacaccatattcagcctgtacaatccacgagacaacagcaagtac
tttgagttttctgtgcttggaaaactcaacaaagctactttacgatacctgcgcagagat
ggtaggatgagtaccgtcaccttcaacaacctgaaactggctgatggtgagaagcatcgc
ctgctcttccatctgaagggactggaggtgggccaaccaggtggcttcccgcacaaccag
ggggtgttaccggtgcccggggtggagctccacctggactgcaggctggtggagacgctg
agagatttaccagctgtgtttaatggcctaaacaatcaccagggagtggagctcaaaact
atgcaggggaaagcacaagaggagttggaggagctcaaactggcatatggtgatacaatg
gaaaatgttgcatcgctgcaggactgccacactcatcagagcgactccgtacagacttta
gggcttaacacgaaacagcttacaaatcagatgctggagctgacaaaggtcattaatgag
cttaaagatgttcttattcagcaggtgaaggaaacatctttcctcagaaacaccatctct
gagtgccaggcctgtgggctgggcggaacggaggtggtgaaaccaaagtgcactcctgga
gtgtgtttccgtgatgacatgtgtatagaaacagctgagggggtggagtgcggtccatgc
cctgatggatacactggagatggatacagctgtgacgacgttaatgagtgccagtttaat
ccctgcttccctggcgtgaggtgtgtgaacatggctccaggtttccgctgtgaggcatgt
cctcttggattcactggcaaaccactggagggtgttggcgtggcttatgcacaaacgcac
aagcaggcgtgtgatgatattgatgagtgtaaaggaccagataatggaggatgcatccct
aactccatctgtgtgaattctgtgggatcatatcaatgtggccgatgtaaaaccggattt
acaggtgaccagattagaggttgtaagccagagaaaagctgcggaaaccgcctacagaac
ccttgcgaccccaatgcgaagtgcatagaggaaagagatggcaccatcacatgccagtgt
ggcattggatgggctggaaacggttatctctgcggtaaagacactgacatcgacgggtac
cctgatgagaagctgcgctgccgagacccaacctgcagaaaggataactgtgttaccgtt
ccaaactcgggacaagaggacgcagatggcgacgggaaaggcgatgcatgtgacccagat
gcagatggcgatggaatactgaatgagcaggataactgctggctgacgccaaatataaat
caactgaacagtgataaggacagccatggtgatgcatgtgacaactgtatccgagtggat
aacccagaccagagagacacagattctgatggcctcggagatgcatgcgatgacgacatg
gatggagatgggttgaaaaatttcctggataactgccagcgagtgaaaaatcgtgaccag
ctggatcgtgatggagatggggtgggagatgcatgtgatagctgtcctgacatcccaaat
ccaaatcagtctgacatagacaatgatcttgtcggagattcttgcgacacaaatcaagat
agcgatggtgatggtcaccaagatagcaaagacaactgcccgctggtaattaacagctcc
cagctggacacggataaagacggactgggagatgaatgtgacaatgatgatgataatgac
ggtattcccgacatactgcctcctggaccagataactgccggttggtgcccaaccctgac
caaattgatgacaacaatgatggaatgggtgacatatgcgaatcagactttgaccaagac
aaggtgatcgacaggatcgataactgccccgaaaatgcagagatcacactgacagacttc
agagcctatcagacggttgtactggacccagagggtgatgctcagattgaccccaactgg
gtggttcttaacaagggaatggagattgtccagactatgaatagtgaccctggccttgct
gttggttacactgcattcagcggtgttgatttcgagggaaccttccatgtgaatacggtc
actgatgacgactatgccggcttcatctttggctaccaagactcttccagtttctatgtg
gtgatgtggaagcaaacggagcagacatactggcaggccacgcccttcagagccgtagct
gaacctggcattcagctgaaggcagtgaagtccaagactggtccaggagagcatttgagg
aactctctctggcatacaggtgacactaatgatcaggtgcgtctcctgtggaaggatcca
agaaacgttggctggaaggataaggtatcataccgctggtacctgcagcaccgcccacaa
gtcggatacatcagggttcgtttctatgagggatcagagctggtggcagattctggggtg
acaattgacaccacaatgagaggaggaagactgggagtgttctgcttctctcaagagaac
atcatctggtcaaacttgaagtaccgctgcaatgacaccattccagaggacttccaggaa
tttagtacacaacatggcatggaccccctgtaa
DBGET
integrated database retrieval system
