Sinocyclocheilus rhinocerous: 107737190 Help Entry 107737190         CDS       T04916                                  Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism srx  Sinocyclocheilus rhinocerous Brite KEGG Orthology (KO) [BR:srx00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:srx03021]     107737190 Enzymes [BR:srx01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      107737190     5.6.2.5  RNA 5'-3' helicase      107737190 Transcription machinery [BR:srx03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      107737190 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SEN1_N AAA_19 AAA_30 UvrD-helicase Viral_helicase1 AAA_22 AAA_16 NAT10_TcmA_helicase DUF6240 nSTAND3 Motif Other DBs NCBI-GeneID:  107737190 NCBI-ProteinID:  XP_016404122 LinkDB All DBs Position Unknown AA seq 2496 aa AA seqDB search MEKCLWCTTSLEAEGDAAIVTMLSHYSSGRLSEREMDSLNEDLGCCLECVVEYHRARDKV PDLHKRLWEMEKARLVHLLGTILDKELEEDDIFIIEDDHVEPVSKILPAEFHDRLRSPLF EVLKYPYLLCYRDLCDLVVKALCKLQDMKQSLSVFEKYQGIYLLLVHPNEQVRRWAIDTA KTMKSVDRDAYYDLQEIFSCMFYVIELGMSLNFPDLDQESYARGVIQTLPSHLYDSQNKK NYWLGICMLLTQLSAEAMDSLFMGQINIPLCILNTMDGLKNEDNPASDPFWPALHCFMVI LDRLGSKIWGQVDPNTAFQTITGAASYVAEIRSIRQKTMGHVFNCDLVVKALCKLQDMKQ SLSVFEKYQGIYLLLVHPNEQVRRWAIDTAKTMKSVDRDAYYDLQEIFSCMFYVIELGMS LNFPDLDQESYARGVIQTLPSHLYDSQNKKNYWLGICMLLTQLSAEAMDSLFMGQINIPL CILNTMDGLKNEDNPASDPFWPALHCFMVILDRLGSKIWGQVDPNTAFQTITGAASYVAE IRSIRQKTMGSSSGVSSNYVIYEDMQSLVTVLDSEMGQSMRVYGSTFLWFIPFVRSIMEL PELNASYISEVIHYLCDKIRENRHMLTGQMSVCDKVTEFFTRILIQTVELHSTEGRMGIL SRCAHKWVGEIVLCIIQSDETHGPPDRMGGIHGVSSTSYNLGIVGRLPASGGGNGAIIAG CMKLIRLLLKEGIRRSVPSATHFLNLLNKQLRGVTNKRWNLTRSESNELQKCLLRVVRSM PERPSSPLPPPCAPSVEAATNTVISRNSVPTLNQKQHEDQEAGPSRAGDESGFIKEESVW NYRNWNLDEDLCSGLEDIIKAKKETLDPVSISQLSPVVQLERIKPDLGKVQEIRSRLNDN QNLSKIKAIAKQKPSESLKSAKEECGFGAAEEEEEEDDDEPLDIKLVRLTKSIHNVESSD SEVDSSAVGKTCNRSIGTSKENVESSTIVISDDDSDNDERPNDILRSPEVCVLSESPSRD YDDLSESQVFEFETQQYVASAWDDSDFDASDLTKKPKSDQLLKPQVDEAPHEASPSSSET ELIPDEDIERACQQAEDKIREQQQPQEPVDSCASSLSKASSTAESWDKFAKPKLVKSTKT TPSDKKQPKKPLIIDALAQKIRRHHLKRSSTSQDVEEPSSSTTPSSCGISSSSPSCSSVS SHYFSAPSSSDTPAIVPPKKVRKVAEPESTAERLGLKKKERKAFELSQRSLDCVAKLRCH GQKVQVEPQQKTRRVRRATKTSPQKRIVKGNKKLLGSQDIQFFKQSREKHQRPATGAIMT LAPKPAKINQPGEVHLPKPTVASSGAGDIFPCPQPDPDHQRDNEKASSGTSSTGDGAGNN KRIESKYFQASETADVNMEKEKPTQEDDEEWMFLSQMEPTDMELCSQMEQFDEENEEELF LTQRDPIDMDIDTDSESDTPGPSLTPKPIQTPIGGNDHLFVKPGMSPMSQKKAKPSTTKI YTPSSRSASLVLEMEKKAKPPPAANVAKAKIPRLPPAMPPPTRLPPAMPPPKTFQPLHPP QLPKPLPSQHAPYAPELVTSSKISSTSEPPSYKVYQRPEAPVNKPVPTMDQSPMFDLSIL TQAILKWEYRMLDNYKAFGSPHDLCQLPLKKVPVQFPSYLEYFNTFYPLLLINAFEEMAS EWLKEGRVKLNLTVQGIEYSNRTASASFTANISQETDIKQLYPKEDDLVLLWLPDNTGSY AHDEPNFHEPHPHFGYVSRSSVSNRGSRPILNLTIQTRSNISSGNSQPVLCEVIGSLISI FREFRALCLLRNGPMLRPLLAPHVSYFTHTLDSPPDLDSPEFNRDQARAIACGLAMINRT QKTPKFLLIHGPPGTGKSKAIGGLLYKLLSSDTNSAAPSGNLHSKSRRTRVLLCAPSNAA IDSLMKKVILIFKEKCRNINAPQGNCGDINLVRLGSERTISKSLKPFSLDHQTKARAQRA QQTAEADIHRRKEQLEQIVENLSQRCAKTNKDSFEFKTLMEQKMQLLKEREGLSRQIKEC RSRRQESQALVLQNAHVICCTLSTSGSIVLENAFRRLGHEPFSCVIIDEASQAKETETLI PMLYRSAAVILVGDPNQLPPTVVSQKAKEFGYDQSLMARLCKSLYQSNPQLSPILLLSVQ YRMHPDICEFPSKYIYNSALKDDCETAQKRCSLSWPFKPYKVFDVTDGIEKKERDSFSNH KEVKLVLLLLKLLGEKQSVRVGVITPYNAQKRRILDAVRGSGIDNKQLQVEVDTVDGFQG REMDCIIVSCVRASSEMGSIGFVGNRQRMNVTITRARFSLFILGHIRTLREQSDWGALIE DAWIRKTIIKTMQNDFERDAQQILKQEREPPTRSLSYPPVGKPSPVTSPVTDAPVETDPA PAPHPQRDMSNVPMPRLIPLECPNNPQMSDRPTDPRFAERRPIREQRPDRDGRGLPESRH STNRSNSYEADSRSPGQSSRYSSKHRGSSPSRRHRR NT seq 7491 nt NT seq  +upstreamnt  +downstreamnt atggagaagtgtctgtggtgcaccacctccctggaggcagagggtgacgcagcgatagtc accatgctgagtcactacagctcaggacggctgtctgagagagagatggactctctgaat gaagacctcggctgctgtctggagtgtgtggtggagtaccatcgagccagagacaaggtc cctgatctgcacaagcgtttgtgggaaatggagaaggctcgacttgtgcatttgttggga accattctggacaaggagctggaggaggacgatatctttattatcgaagatgatcatgtg gagccagtgtcgaagatcttgcctgcagaattccacgaccgtctccgttctccactgttt gaagttctgaagtatccgtacttgctttgctaccgtgatctgtgtgatttggtggtaaag gccttgtgtaagttacaggatatgaagcagtctttgtctgtgttcgagaagtatcaagga atatatctgcttctcgttcatcccaacgaacaggtgcgccgctgggcaatcgatacagca aagaccatgaagagtgtggacagggatgcctactatgaccttcaagagattttctcctgc atgttttatgtcattgagcttggaatgtctttgaactttccagatttggatcaagagtct tatgcacggggcgtcatacaaacgctcccctctcacctctatgactcgcaaaacaagaag aactactggctaggtatctgtatgttactaacgcagctcagtgcggaggcaatggactct ctgttcatgggacagattaacataccgctttgcatactcaacacaatggatgggttgaaa aatgaggataacccagcttctgacccattctggccagccctccactgttttatggtaatt ctggaccgacttggttctaagatctggggtcaggttgaccctaatacagcattccagaca atcaccggagcagccagctatgttgcggaaattagaagcatccggcaaaaaaccatgggt catgtgtttaactgtgatttggtggtaaaggccttgtgtaagttgcaggatatgaagcag tctttgtctgtgttcgagaagtatcaaggaatatatctgcttctcgttcatcccaacgaa caggtgcgccgctgggcaatcgatacagcaaagaccatgaagagtgtggacagggatgcc tactatgaccttcaagagattttctcctgcatgttttatgtcattgagcttggaatgtct ttgaactttccagatttggatcaagagtcttatgcacggggcgtcatacaaacgctcccc tctcacctctatgactcgcaaaacaagaagaactactggctaggtatctgtatgttacta acgcagctcagtgcggaggcaatggactctctgttcatgggacagattaacataccgctt tgcatactcaacacaatggatgggttgaaaaatgaggataacccagcttctgacccattc tggccagccctccactgttttatggtaattctggaccgacttggttctaagatctggggt caggttgaccctaatacagcattccagacaatcaccggagcagccagctatgttgcggaa attagaagcatccggcaaaaaaccatgggatccagcagtggtgtttccagcaactatgtg atctatgaggatatgcagtccctggtcaccgtgcttgattctgaaatgggccagagcatg cgtgtatacggaagcacttttctgtggttcattccatttgtccgttccataatggaactt ccagagctcaacgcttcctatattagtgaagtcatccactatctttgtgataagatacga gaaaatcggcacatgctaaccggacagatgagtgtgtgcgataaagtgaccgagttcttc actcgtatccttattcagactgttgagctacactctactgaaggacgaatgggaatactt tctcgctgtgcccacaagtgggtgggagagattgtcttgtgcatcatccaatcagatgaa acacatggaccaccagacaggatgggtgggattcacggagtcagttcaacctcatacaac cttgggatagttggaagattgcctgcatctggaggaggcaatggtgccataattgctggc tgcatgaaactgattcgactgctgctgaaagaagggataaggagatctgtcccaagcgcg acccactttttgaatttgcttaacaagcagttgcgtggagttacaaacaaacgatggaat ctaacacgttctgaatctaatgagcttcagaagtgtttgttaagagttgtccggtcgatg ccagaaagaccttcttctccactcccaccaccatgtgcaccatcagtggaggcagctaca aacactgttatttccagaaattcagtgccaaccctaaatcagaaacaacatgaggaccag gaggcaggtccgagcagagcaggagatgaatctggttttatcaaagaggagtcagtttgg aattatagaaattggaacttggatgaggatttgtgcagcggtcttgaggatatcataaag gctaagaaggaaacccttgatccagtgtcaatttcacagctgagtccagttgttcagttg gaacgcattaaaccagatctgggaaaagtgcaggaaattcgatccagattaaatgataac cagaatttgtcaaagatcaaagccattgccaaacaaaagcctagtgagtccttaaaatca gctaaagaggaatgtggttttggagctgctgaggaggaggaggaggaggatgacgatgaa ccccttgatatcaaactggttcgtctgacaaaatctatccacaacgttgaatctagcgac tccgaagttgacagtagtgctgttggaaaaacttgtaaccggtccattggcacctcaaag gaaaatgtggagtccagtaccattgttatctctgatgatgattctgataatgatgaaagg ccaaatgacatcctgaggtctccagaagtttgtgtcttgtctgagagccccagtcgtgat tatgatgatctcagtgaatcacaggtctttgagtttgagacccagcaatatgtggcgtct gcctgggatgattccgattttgatgcgtcagacttgacgaagaagcccaaatcggaccaa ctactcaaaccacaggtggatgaagctcctcatgaagcatctccatcaagttcagagacc gaactaattccagatgaagacattgagagggcttgtcagcaagcagaagataagatcaga gaacagcagcagccacaagagccagtggattcatgtgcatcatcactgtccaaagcatcc agtactgcagaaagctgggataaatttgccaaaccaaaactggttaaaagcacaaaaaca actccatctgataagaaacagcctaaaaagccattgataattgatgcccttgctcaaaaa atcagacgccaccatttgaaacgtagctccacatctcaggacgtagaggaaccttcctct tcaactactccatcctcatgtggtatatcatcttcctctccatcctgcagctctgtttcc tcacattatttttctgcccccagttcaagtgatacccctgcgattgttcccccaaagaag gtgcgtaaggttgctgagccagaatcaacagcagagcgtttgggattaaaaaagaaggaa aggaaagcttttgaactttctcagcgctccctggattgtgttgctaaattgaggtgccat ggtcagaaagtgcaggtggaaccacaacagaagacaaggcgagtgcgtcgagccactaag acttctccacagaaacgtatagtaaaaggcaacaagaaacttctgggatcacaagatatt cagtttttcaagcaaagtcgtgagaagcatcagaggccagcaacaggagccatcatgaca ttagctcccaaaccagcaaagatcaatcagccaggtgaagtgcacttaccgaaacctaca gttgcaagcagcggggctggtgatatctttccctgtcctcagccagatcctgaccatcag cgggataatgaaaaggcttcatcaggaaccagttctacaggtgatggggctggaaataat aaaagaatagaatccaagtacttccaagccagtgagactgctgatgtcaacatggaaaaa gaaaaacctactcaggaggatgatgaagaatggatgttcctcagtcagatggaacccacc gacatggaactgtgctctcaaatggagcagtttgatgaagaaaatgaggaagaactcttt cttacccagagagatcctattgacatggacattgatacagatagtgagtcagatacccca gggccaagcttgacacctaaacctattcagactcctattggtggaaatgatcatttgttc gtgaagcctggcatgtcacctatgtctcagaaaaaggccaaaccttctaccacaaaaata tacacccccagctcccgcagtgcctcgcttgtccttgaaatggaaaaaaaagccaagcct cctcctgctgcgaatgttgcgaaagcgaagattccccgactgcccccagcaatgccacct ccaacccgactgcccccagcaatgccacctccaaaaacatttcaacctctccatcctcca caactcccaaagccacttccttcacaacatgctccatatgctcccgagttggtcactagt tctaaaataagctccacctcagagccaccatcttacaaggtataccaaagacctgaggct ccagttaacaaaccagtacccacgatggatcaaagcccgatgtttgacctttcaatcttg acccaagcaatccttaaatgggaatataggatgcttgacaactacaaagcatttgggagt ccacatgatctgtgccagctaccgctgaagaaagtgccagttcagtttcctagctacctg gagtacttcaacaccttttaccccctgctgctaattaatgcatttgaagagatggcgagt gaatggctcaaagagggcagagtcaagcttaacctaacagtccagggtatagaatacagc aatcgcacagctagtgccagcttcacagcaaacatttctcaggaaactgatataaaacaa ctgtacccaaaagaagatgaccttgtgctactttggttgcctgacaacactgggtcatat gcccacgatgaacctaatttccatgaaccacatcctcattttggctatgtgtctcggtcc agtgtttccaacagaggttccaggccaattctaaacttgacgattcagacacgtagtaat atatcttcggggaattcccaacctgtgctctgtgaagttattggatcattgatcagcata ttccgggagttccgtgcactgtgtttgctgcggaatggaccaatgttgcgtcctcttctt gctccacatgtgtcttatttcacgcacactctggatagcccaccggacctggattcacca gagttcaacagggaccaagcaagagcaatagcttgcggtcttgccatgataaacagaaca cagaagaccccaaaatttctccttatccatggtcctccaggaaccgggaagagtaaagca attggtggcctgttgtacaaactattatcttcggatactaacagtgctgctccttcgggg aaccttcactccaagtctcgacggacacgagttcttctctgtgctccctctaacgctgcc atcgacagtctgatgaagaaagtcattttgatctttaaagagaaatgccgaaacatcaat gcacctcaaggtaactgcggtgacataaacctggtacgattgggaagtgaaaggaccatc tcgaagtcactaaaacctttcagcctcgaccaccagactaaagctagagcacagcgagct cagcaaactgcagaagctgacatacacaggcggaaggagcaactggaacaaattgttgaa aatctctcccagcgatgtgcaaaaaccaataaggattcttttgagttcaagacgttgatg gagcagaagatgcagcttctgaaagagagagaaggactgagtcggcagattaaagagtgt cgcagcaggcgacaggagagtcaagctcttgtgctgcaaaacgctcatgtgatctgctgc acgctcagcaccagtggaagtattgtcctcgagaatgccttccgtcgtctcggacatgaa ccatttagctgcgtcatcattgatgaggctagtcaggctaaagaaactgagactctgatc cccatgctgtaccgaagtgctgctgtaatccttgtcggtgatcccaaccagcttccacca acagttgtctctcagaaagcaaaggagtttggctacgaccagtctcttatggcacggtta tgcaaaagtctttatcagtcaaacccgcaactctctccaatcctcctgctcagcgtgcag taccgcatgcacccggacatctgtgaattcccctccaagtacatctacaacagcgctctt aaggatgactgtgagaccgctcagaaacgctgttccctcagctggcccttcaagccctac aaagtgttcgacgtgacggatgggatagagaagaaggagagagattcattttccaatcac aaagaagtcaagctggtcttgctgctgttgaagctgctgggcgagaagcagtcagtgcga gtgggcgtcatcacaccctacaacgcccagaaacgacgcatactggatgccgtcaggggt tcaggcatcgacaacaagcaacttcaggttgaagtcgatacagtcgatggctttcagggc agagaaatggactgcatcattgtgtcttgtgtgagagccagcagtgaaatgggctccatt gggtttgttggaaatcggcagagaatgaatgtaaccatcaccagagccagatttagtctc tttatactgggacatatacgcacactcagggaacaaagtgattggggagcattgattgag gacgcttggatacgtaaaactatcatcaaaacaatgcaaaacgattttgaaagggacgcc cagcagattcttaaacaagaacgagagccgccgacccgcagtctctcttatcccccagtc gggaaaccaagccctgtgacctcacctgttacggatgcacctgtggaaacagaccccgcc cctgcgccccaccctcaacgtgacatgagcaacgtacctatgccacggctaatacccttg gaatgccctaataacccacagatgagcgacaggcccacagacccacggtttgcagagcgc cggccaatcagagaacagagaccggacagagatgggcggggcttaccagagtcccgccac tcaacaaacagatctaattcatatgaagccgactctagaagtcctggccagtcttccaga tactcttcaaaacaccgcggttcttcaccgtcaagacgacacaggagataa

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