Sinocyclocheilus rhinocerous: 107737293
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Entry
107737293 CDS
T04916
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03015
mRNA surveillance pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107737293
09123 Folding, sorting and degradation
03018 RNA degradation
107737293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107737293
03041 Spliceosome [BR:
srx03041
]
107737293
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107737293
mRNA cycle factors
Stress granule specific factors
107737293
Spliceosome [BR:
srx03041
]
Complex C
Other components
Complex C specific factors
107737293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_MUD2_C
RRM_5
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
107737293
NCBI-ProteinID:
XP_016404245
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHSDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVCPALSIRVMTDN
GGKSRGFGFVSFERHEDAQRAVDEMNGKELNGKQVYVGRAQKKGERQTELKRKFEQMKQD
RMTRYQGVNLYVKNLDDGLDDERLRKEFAPFGTITSAKTNPVKAVTEMNGRIVATKPLYV
ALAQRKEERQAHLTSQYMQRMASVRAVPNPVLNPYQPAPPSGYFMAAIPQAQNRAAYYPT
SQLAQLRPSPRWATQGVRPQHFQGMPNTIRPSAPRPQTFGAMRPASQVPRVIAPQRMASQ
AMGPRPSIAGAATGTAQVRGVPQYKYAPGVRNPQQHMPTQPQVPMQQPAVHVQGQEPLTA
SMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKV
DEAVAVLQAHQAKESAQKPVPSTAVPAV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcgcccagttacccgatggcttctctgtatgtgggcgatctgcactcg
gacgtgaccgaggccatgctgtacgagaagttcagtccagccgggcccatcctctccatc
cgggtctgcagggacatgatgacccgccgctcgctcggttacgcctacgtcaacttccag
cagcccgccgacgccgagcgcgccttggacacaatgaactttgacgtgatcaagggccgg
cccctccgcatcatgtggtcccagcgagacccgtcactgcgcaagagcggcgtgggaaac
atcttcatcaagaatctggacaagtccatcgacaacaaggccctctacgacacgttctct
gccttcggcaacattctgtcctgcaaggtggtttgcgatgagaacggctctaaaggatac
ggctttgttcactttgagacccatgaggctgcagaaagagccattgagaaaatgaacggc
atgttgctcaatgaccgcaaagtgtgtccagcgctgagcattcgtgtcatgaccgacaac
ggcggcaaatctagaggcttcggcttcgtcagctttgagaggcacgaggacgcccagagg
gctgttgatgagatgaatggaaaagagctgaacgggaagcaggtgtacgtgggtcgcgct
cagaagaagggagagcgtcagacggagctcaagcgcaagtttgagcaaatgaagcaggac
cgcatgactcgctaccagggagtcaatctctacgtgaaaaatctggacgacggcctcgat
gacgaacgtctgcgtaaagaatttgctccgtttggcaccatcaccagcgctaagacgaat
ccagtcaaagccgtgacggagatgaacggtcgtatcgtggccaccaagccgctgtatgtg
gctctggctcagaggaaggaggagcgtcaggcacatctcaccagtcagtacatgcagagg
atggctagcgtcagagccgtgcccaaccctgtcctcaacccctaccagccagcgccacca
tccggatacttcatggccgctattccacaggctcagaatcgtgctgcttactatcccacc
agtcagctcgctcagctccgccccagtcctcgctgggccactcagggtgtccgccctcag
catttccagggcatgcccaacaccatcaggccctcggcgccccgtccgcagaccttcggc
gccatgcgtcccgcctcgcaggtcccacgggtgatcgcgccccagcgcatggcgtctcag
gccatgggccctcgtccctccattgcaggtgcagccacaggaacagctcaggtgagagga
gtgccgcagtacaaatacgcacctggagtccgcaacccacagcagcacatgcccactcag
ccgcaggtgcccatgcaacagcctgctgtccacgttcagggtcaggagcctctgacggcg
tccatgttggctgccgcccctccacaagaacagaagcagatgctgggtgagcgtctgttc
ccgctcatccagaacatgcatcccagtctggctggaaagatcaccggaatgctgctggag
atcgacaactctgagctgctgcacatgctggagtctccggagtccctgaggtcaaaggtg
gatgaagcagtagcggtgctgcaggctcatcaggccaaagaatctgcccagaaaccagtc
cccagcaccgctgtgccggccgtctaa
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