Sinocyclocheilus rhinocerous: 107737349
Help
Entry
107737349 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
srx00535
]
107737349
Proteoglycans [BR:
srx00535
]
Extracellular matrix (ECM) proteoglycans
Others
107737349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
107737349
NCBI-ProteinID:
XP_016404310
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MLAVIRSTEQLYILIKGDLSEGCSCFRCAAVPMPRRLRFKELSSNTLGVTWKEPKGAFDS
YRLLYSTDSGDERELILSRSEPKAVIAGFDRRKEYSVKITAVRGAAQSKALLGRFTGWGS
GSEVSDVSEPLGQQDTSADPQDNEIREVDVFTCRTPAVADIVILVDGSWSIGRINFRLVR
MFLESLVRAFAVGSEHTRVGLAQYSGDPRIEWHLNTHSTKEAVIDAVKTLPYKGGNTLTG
LALTYILENSFKAESGSRPDVPKIGILITDGKSQDDVLSPAQRLRDAGIELFAIGVKNAD
ENELRAIASPPEETHMYNVADFSVMSSIVEGLTRSVCERVSELSREISGETDSYSTRSLD
APSNLVTSEVMARSFRVSWTHAAGPVEKYRVVYYSSSESRPEEVVVNGDDNSVVLRYLNS
LTEYQITVFAIYSNAASEALRGSETTLALPTVSNLELHDITHSSMRARWREAEGASGYMI
LYAPLTEGDPADEKEVKVSDSVTQVELEGLTPATEYTVTVYALYGEEASDPMTAQETTLR
LTPARNLRISDVSHSSAKLSWDAASRKVKGYRIVYVKTDAVETNKVEVGPVTTLLLRNLT
SLTEYTVAIFALYDEGQAEPLTDSFTTSEVPLPLNLRSSDVSTDSFRVMWQDAASDVSFY
RLTWRPAAGGETKEVLINDNSNWFVITGLKPLTEYEVSLSAIYRDESESDLVEISETTVA
RTTTVVTTTVRTTTAVQQSRSLLVWVLMLWYRLPDGSNVLEEGKLTSDDVLGFPVEREQE
RTENIALWGTGVEGQWGGDIAANSSPGSIQTQSPEFHHKLRGHYDGKVQCAGVSSSAVPL
SAPSNLRVSEEWYNRFRISWDAPPSPTMGYRIVYQPTSAASRALETFVGDDINTMLIVNL
LSGTEYNVKVIATYTTGSSEALSGRAKTLYLGVSNLSTYQVRTSSMCVQWQPHRHANLYR
LVLQSPLRECLCSEILTHALETNVFTEVMCRATKADLVFLVDGSWSIGDDNFQKIIRFLY
STAGALDRIGPDGTQVAIAQFSDDARTEFRLSSYDKKENLLDAIQRISYKGGNTKTGRAM
QHVKDSVFTAVGGARRGVPKVLVVLTDGRSQDDVLQVSQEIQAEGYIVFAIGFSDADYGE
LVSIASKPSERHVFFVDDLDAFRKIEEKLITFVCEAASATCPSVPMSGSTLPGFRMMETF
GLVEHMYSSVSGVSMEPGTFNSYSSFRLGSDALVTQPTRFIHPEGLPSDYTITMVFRLLP
ETPQEPFALWEVLNSNNEPLVGVILDNPGKTLTYFNTDYNGDFQTVTFEGPDIQKLFXGS
FHKLHIAVSKTSALVMVDCKPAGEKPVNAAKNISTDGVEVLGRMVRSRGSKDNSAPFQLQ
SFDIVCSTSWAQRDKCCELPSLRKEAECPSLPRACTCTQDSKGPPGLAGPPGGPGIRGSR
GDRGEPGPVGPVGPVGDAGVPGAQGPPGPPGPSGRSIRGPPGAPGETGQKGDAGPSGLQG
VPGSPGPAGRDGPPGSRGLPGQDGPQGRVGPPGTIGGPGVPGAPGENGPPGPTGDQGPPG
HLGPKGEKGERGDVQSTASVQAIARQVCEQLIQSHMARYSSILNHIPSQPVSIRTVPGPP
GEPGRQGTPGPQGEQGPSGRPGFPGTNGENGQPGARGPLGEKGEKGSPGVGVQGPRGPAG
PPGAPGEGRTGSPGPSGRPGNPGSPGRPGIPGPVGPPGPPGYCDQNSCLGYNVGELGVDA
DLIDTDVPAVQPSSYQPYGPEAEDDDPYGSYTSYYQPNYPPPRPVQPDDPVIEEELRSPG
MQRHTRRR
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgtgattagatcaacagagcaactgtacatcctaattaaaggtgatctttct
gagggatgttcttgtttccgctgtgccgcagtgccgatgcccagaaggctgcgttttaaa
gagctgagctccaacacgctcggcgtgacctggaaggagccgaagggagcgttcgacagc
tatagactcctgtacagcactgactcaggagacgagcgtgagctgatattgagtagatct
gagcccaaagccgtcatcgctgggtttgaccgcaggaaagagtacagcgtgaagatcaca
gccgtcagaggagctgcgcagagtaaagccctgctgggcagattcactggatggggatcg
gggtcagaggtgagtgacgtcagcgagccgctcggtcagcaggacaccagcgcagacccg
caggacaatgagatcagagaagtggacgtgttcacatgtagaactccagccgttgccgat
atcgtgattctggtggatggatcgtggagcatcggccgaattaatttccgtttggtgcgg
atgtttctggaaagtctcgtcagggccttcgcggttggatctgaacacacacgtgttggt
ttggcgcagtacagcggggatccgcggattgagtggcatctgaacactcacagcactaaa
gaggctgtcatcgacgccgtgaagactctgccttataaaggaggaaacacactcacaggt
cttgctctgacatatattctggagaacagcttcaaagctgaatctggatccagacctgac
gttcctaagattgggattctgatcacagatgggaaatcacaggacgatgttctttctcct
gctcagagactcagagacgctgggattgagctgtttgctatcggagtgaagaacgcagat
gagaatgagctgagagccatcgcctctccgccggaggaaacacacatgtataacgtggct
gatttcagcgtgatgagctccatcgtggagggactgaccaggagcgtctgcgagcgcgtc
tctgaactcagcagagagatcagcggtgagacagattcatattccacgaggtcactggac
gctcccagtaaccttgtgacctctgaggtcatggccaggagcttccgtgtgtcatggacc
catgctgcagggccggtggagaagtacagagtggtgtattactcatccagtgaatccaga
cccgaagaggtggtggtgaacggcgatgataactctgtggtgttgaggtatctgaactct
ctgacggagtatcagatcactgtgttcgccatctacagcaacgcagccagtgaagctctg
agaggcagcgagaccaccttggcgttgccgacggtcagtaatctggagctgcatgacatc
actcacagtagcatgcgtgcgcgctggcgggaggcagagggggcttctgggtacatgatc
ctgtacgcgcctctgacggagggtgaccccgcggacgagaaggaggttaaagtgtccgac
tccgtgactcaggttgaactggaaggtttaactcctgcgaccgaatacacagtgactgtt
tatgccctgtatggagaggaagccagtgaccccatgaccgcgcaggagaccacgctccgt
ctgactccggctcgtaatctgcgcatctcagacgtcagtcacagctccgctaaactctcg
tgggacgcggcgtctcgtaaggtcaaaggttaccgtattgtttatgtgaagacggacgct
gtggagaccaataaggtggaagtgggtccggtcaccacgctgttgctgcgtaacctgacc
tctctgacggagtacaccgtcgccatctttgccctgtatgacgagggacaagcagaaccg
ctgacggacagcttcaccaccagtgaggttcctctgccgctgaatctccgcagcagtgac
gtgtccaccgatagcttcagagtgatgtggcaagacgccgcttctgacgtctccttctac
agactcacttggagacccgcagcaggaggagagactaaagaggttctcatcaatgataac
tccaactggtttgtcatcacgggtctgaagcctttgactgaatatgaagtttctctgtct
gcgatctacagagacgagtctgagagcgatctggtggagatcagtgagaccacagtcgcc
agaacaacaacagttgtgacgacgaccgtcagaacgactacagccgttcagcagtctcgc
agtctgctggtgtgggtcctgatgctgtggtatcgtctgcctgatggtagcaatgtcctg
gaggaagggaagctcacctccgacgatgtgctgggctttccggttgagagagaacaggag
aggactgagaacatagccctgtggggcaccggtgttgagggtcagtggggaggagatatt
gctgccaactctagtccaggatctattcagacccagagcccggagtttcaccacaagctt
agggggcactatgatgggaaagtgcagtgtgcaggggtctcttcctctgcagtgcctctc
tctgctcccagtaacctccgtgtgtctgaggagtggtacaaccgcttccgcatcagctgg
gacgcgccgccgtcgcccaccatgggttacaggatcgtctaccagcccacctcagcggcc
agccgcgcgctggagacgttcgtgggcgacgacatcaacaccatgctgattgtcaatctg
ttgagcgggacggagtacaacgttaaagtcatcgccacctacaccacgggatccagcgag
gccctgagtggacgcgccaaaacactgtatctgggagtgagtaacctcagcacgtatcag
gtgcggacgagcagcatgtgtgtgcagtggcagccgcatcgacacgcaaacctgtaccgc
ctcgtcctgcagtcgccgctccgtgagtgtttgtgttcggaaatacttacacatgcttta
gagacgaatgtgttcacagaagtgatgtgtcgagccactaaagcagatctggtgtttctg
gtggacgggtcgtggagtatcggagatgacaacttccagaagatcatccgcttcctgtac
agcaccgccggagctctggaccgcatcggtccggacgggactcaggtggccatcgctcag
ttcagtgacgacgctcgcaccgagttcaggctcagctcatacgacaagaaagaaaacctg
ctggacgccattcagaggatctcatataaaggaggaaacacaaagacaggccgggcaatg
cagcacgtgaaggactctgtgttcacggcggtgggcggagccagaaggggcgtgcctaaa
gtcctggtggtgctgacagacggccgttcccaagacgacgtgctccaggtttcccaggag
atccaggcagaaggttacatcgtttttgccattggtttttccgatgctgattacggcgag
ctggtgagtatcgccagcaaacccagcgagagacacgtgttcttcgtggacgatctggat
gctttcagaaagattgaagagaaactgatcacctttgtttgtgaagctgcatcagcaacg
tgtccatcagtacccatgagcggcagcactttaccagggttcaggatgatggagacgttc
gggctggtggagcatatgtacagcagtgtgagcggtgtgtccatggagccggggaccttc
aacagctacagcagcttcagactcggcagcgacgcactcgtcacgcagcccaccaggttc
atccatccggaggggctgccgtcagactacaccatcaccatggtcttccgcctgctcccc
gagacgccacaggagccctttgcattgtgggaagtcctcaacagcaacaacgagccgctg
gtgggagtcattctggacaatccaggaaagacgctgacttacttcaacactgattataat
ggtgattttcagacggtgacgtttgaggggccggacatccagaagctcttctaaggcagt
tttcataagctgcacatcgccgtcagtaagacgtcggctcttgtgatggtcgactgtaaa
ccggcgggagagaagcctgttaatgcggccaaaaacatcagcactgatggcgtggaggtt
ctgggacggatggtgcgatccagaggatccaaagacaactctgcaccgtttcagctgcag
tcctttgatattgtctgcagcacgtcatgggctcaacgggacaaatgctgcgagctgccc
agcctgagaaaggaagctgagtgtccatctctcccgcgcgcctgcacctgcactcaggac
agtaagggcccccctggcctcgccggccccccaggaggtccgggcatcagaggatccaga
ggagatcgaggtgaacccggccctgtgggtcctgttggtccagtgggggacgctggcgtt
ccgggtgctcaggggcctcccggtcctccggggcccagcggacgctctatcagaggccct
ccgggggctccgggtgagacgggacagaagggtgacgccggtccttcaggactgcagggt
gttcccggctctccagggcctgcaggccgcgacgggcctccaggatcgcggggtttgccg
ggtcaggatggccctcagggacgagtgggaccaccgggaaccataggtggtccgggagta
ccaggggccccgggagaaaatggccctccaggacccacaggagaccagggtcctccggga
cacctgggacccaagggagagaagggtgagcggggtgacgtccagtccacggcttctgtc
caagccatagccagacaagtgtgcgagcagctgatccagagtcacatggcgcggtacagt
tctattctgaaccacattcctagtcagccagtgtcgatccgcaccgttcccggaccgccg
ggagagccgggacgacaggggactccaggacctcagggagagcaggggccatcgggacga
ccgggattccctggcactaacggagagaacggccagccgggagcgcgaggacctctgggt
gagaagggagagaagggcagtccaggtgtgggagtccagggacccagaggacctgctgga
ccaccaggagctcctggtgaaggccgaacaggaagtccaggtccatctggtcgccccggt
aaccccggcagtcccggcagacctgggattcccggacctgttggtccgcccggcccaccc
ggatactgcgaccagaactcatgcctcggctacaacgtgggagagctgggcgttgatgct
gacctcattgacacagatgttcctgcagttcagcccagctcctaccagccgtacggcccg
gaggccgaggacgacgacccctacggctcctacacctcctactaccagcccaactaccct
ccgccgcggcccgtgcagcccgacgaccccgtcatagaggaggagctgcgctcgcccggc
atgcagcggcacacgcgcagacgctag
DBGET
integrated database retrieval system
