Sinocyclocheilus rhinocerous: 107737737
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Entry
107737737 CDS
T04916
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107737737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107737737
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107737737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Med8
Motif
Other DBs
NCBI-GeneID:
107737737
NCBI-ProteinID:
XP_016404807
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MTSLGSSSSSTTEYVVRVPKNTSKKYNIMAFNAGDKVSCSTWTQARMERDMSNRRIYGEE
ETQEGAAGSEFGKKQREEARRKKYGIVTKEFKVEDQPWILKVNGKAGRRFKGLKKGGVTE
NASYYIFTQCADGAFEAFPVHSWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLRGQERGEEDEEEGEKGGKKKKKGGRGGDLRIHDLEDDLEMSSDESDGSNGDDDEAKSK
AKKDKGPKGKGKKKKKKGSDLEGFEDSDDGDFEGLEVDYMSDESSSEEEEPEKTKPNKGE
DVPKGIDEMSDSEEESEEENKNEEDGKEEEEEEDGKKTPVQVEKKKKKDSSGESDSSEDS
DIEGEAASALFMKKRTPPKRGGGRGSAGSSRTGSRPGTPSIDNAATSNTLRAAANKLEQG
KRQTTVPSSETPAAKRLKMEPSPQSSSGNGTPQPASGKSTPSSSDVLLTEDAVRRYLIRK
PMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNINDKMHFYLTE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactggggagcagcagttcctccacaacggagtatgttgtacgagttcctaaa
aacaccagtaagaaatacaacataatggctttcaatgctggtgataaagtcagttgttcc
acatggactcaggctcgtatggagcgtgacatgagtaataggcgtatatatggtgaggag
gagactcaggagggggcagcaggcagtgagttcggaaagaaacagagagaggaagcacgg
aggaagaagtatggcatcgttacgaaggagttcaaggtggaggaccagccctggatcctt
aaagttaatggcaaggcaggaagacgattcaagggtctgaaaaaaggtggagtcactgag
aacgcttcctactacatcttcacacagtgtgccgatggggccttcgaggcatttcccgtg
cattcctggtacaacttcacgccgcaggccaagcaccgcacgctcacagcagaggaggca
gaggaagagtggggcaggagaaacaaagtggtgaatcacttcagtatcatgcttcagcga
cgtctcagaggacaggagcgaggagaggaggatgaggaggaaggagaaaagggggggaag
aaaaagaagaagggaggcaggggaggagacctgcgcatacatgaccttgaggatgatttg
gaaatgagcagcgatgagagtgacggcagcaatggagacgatgatgaagccaagtcaaaa
gctaaaaaggacaaaggccccaaaggcaagggaaagaagaagaagaaaaagggcagcgac
ctggaaggattcgaggatagtgatgatggcgactttgaggggttggaggtggactacatg
tctgatgagagcagttctgaagaagaggagccagagaagaccaagcccaataagggagag
gacgtacctaaagggattgatgaaatgtctgacagtgaggaagagagtgaggaagaaaac
aagaatgaggaagatggcaaggaggaagaagaggaggaagatggaaagaagacaccggtg
caggtggaaaagaagaaaaagaaagacagcagtggcgagtccgacagctcagaggacagt
gatattgaaggagaggcagcttcagcactgttcatgaagaagcgcactcctcctaagcga
gggggtggtcgtggctcagcaggtagttcaaggacaggaagtcgacctggcacaccttct
attgacaacgccgccacttccaacacacttcgtgctgctgccaacaaactggagcaaggt
aagcgtcagacaactgtgcccagctcagagactccagcggcgaagagattaaagatggag
cccagccctcagagctcttcaggaaatggcacaccccaaccagcgtcaggaaaatccacc
cccagctccagtgatgtgcttctgacagaggatgccgtgcgcaggtatctcatcaggaag
cccatgaccactaaagacctgctgaagaagttccagactaagcgcacaggcctcagcagc
gagcagacagtcaacgtgctcgcccagatcttgaagaggctcaacccagagaggaagaac
atcaatgacaagatgcacttctacctcacagagtga
DBGET
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