Sinocyclocheilus rhinocerous: 107737815
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Entry
107737815 CDS
T04916
Symbol
smarcc1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107737815 (smarcc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107737815 (smarcc1)
03036 Chromosome and associated proteins [BR:
srx03036
]
107737815 (smarcc1)
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107737815 (smarcc1)
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107737815 (smarcc1)
PBAF complex
107737815 (smarcc1)
GBAF(ncBAF) complex
107737815 (smarcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
107737815
NCBI-ProteinID:
XP_016404923
UniProt:
A0A673MVB9
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MATAATAAGGTGSGGPSAGQAGAGSSIGRKKDGGPSSKFWESSETVSQLETVRLWIGKHY
KKYVQTDSPTNKTLAALVVQLLQFQEDAFGRRVSNPALTKLPAKSFLDFKPGGALCHILG
SAYKFKSEQGWRRFDLQNPSRMDRNVEMFMTIEKTLVQNNSLTRPIVYIVSDMEQKQANK
LKDIIKRHQGTITEEKSKATHIIYPSPAQMEEEEWLRPVMRKDKQVLVHWGNYPDSYDTW
VSTNDVDGDVEDPPSSEKPWRVHAKWVIDTDAFNEWMNEEDYEVDENKKPVSFRQRIFPG
EEVSSRTPDRKDRKSLVAGKKRRRSPSPPSTPAESRKKGKKGNPGSQGRRRGHQNDDEQD
EDLTKDLEDPSPVPGMEEVTLPKNVNQKKDSENTPVKGGTVADLDDQEDDSLASGGKEED
EQGKTEVNRLIDSEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPE
IYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAESRP
LPMGPPPTPHFNVLTDTPSGLVPLHHRPPQVPPAQQMLNFPEKGKDKPTDLQNFGLRTDI
YSKKNPKGKGAAGGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI
EDQYLESSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVR
EEVPMELVEAHVKKVQEAARSTGKVDPAFGLESSGIAGTAPEEPEKTEPTEIEKMDNDSN
SQPDKAESKDEAEKPSESAEKPTETEKEKNETTEKSEPQEEEESEGGESKTAEKDKDEDM
ETTEEGKEGEEEKEEGKKKLELDIGEGNIATAAAAALASAATKAKHLAAVEERKIKSLVA
LLVETQMKKLELKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAEMKARQQ
MEQQAAAQQNAGAHHGPPPHGPSPHGPPPGMHPVHPGHPGHPGPGYPPMHHTMGPHHAPQ
TGPMVGPGQPMPGQPMPGRMMPGPPPVGPPQGGMPPMMGPRHPGPPNGMYPGPPPTAQPD
GMPPGPVGPPVSAPPPRAAEN
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggcaactgcagcgggcggaacgggctccggaggaccatcggccggccag
gcgggcgccggttcctcgatcggacgtaaaaaagacggagggccttcttccaaattttgg
gagagctcggaaacggtgtctcagttggagacagttcggctgtggattgggaaacattat
aagaagtatgtccaaaccgactctcctacaaacaaaactttggctgcgctggtggtgcag
ttgctgcagtttcaggaggatgcatttgggcgtagagtcagcaatcctgctcttaccaaa
ctacctgcaaagagctttctggatttcaaacctggaggagccctttgccacattctgggt
tctgcatacaagttcaaaagtgagcaaggctggaggaggtttgatctgcagaacccatcc
agaatggatagaaacgtggagatgttcatgactattgagaagactcttgttcagaacaac
tctttgacccgaccaattgtgtacattgtgtctgacatggagcaaaagcaagccaataag
ctcaaagacatcattaagagacatcagggaaccatcactgaagaaaagtcaaaggccact
catattatttacccctccccagcccagatggaagaagaggaatggctacgtcccgtcatg
cgcaaagacaagcaagttttggttcactggggcaattatcctgacagttatgacacatgg
gtatcaacaaatgatgtggatggagatgttgaggatccaccaagttctgagaagccatgg
agggtgcatgcaaaatgggtcatcgacacagatgctttcaacgagtggatgaatgaggaa
gattacgaagtggatgagaacaagaagcctgtgagtttccgccagcggatctttccaggg
gaggaagtgtcttcccgtacacccgatcgtaaggaccgcaagtccctggttgccggcaag
aagaggagacgctctccatccccacccagcacccctgcggagtcccgcaaaaagggcaag
aaagggaatcctggatcacaggggaggcgccgtggacatcaaaatgatgacgagcaggat
gaagacctcacaaaggacctggaagatccctcccctgtgccaggaatggaggaagttaca
ttgccaaaaaatgtcaatcagaaaaaggacagtgagaacacaccagtgaaaggcggaacg
gttgctgatttggatgaccaggaagatgattcactagcatctggaggcaaggaagaggat
gaacagggcaaaacagaggtcaatcgtctgatcgactctgaggacaacgtgactgaacaa
acccatcacatcattatacccagctatgctgcctggttcgactacaatagtatacatgaa
attgagaggcgtgccctgccagagttcttcaatggcaaaaacaaatctaagactccagag
atctatctggcttatcgtaacttcatgattgacacataccggctgaatcctcaggagtac
ttgacctccacctcctgcaggagaaacctcactggagatgtgtgtgcagtcatgagagtg
catgcctttttggagcagtgggggctggtgaactaccaggttgacgctgagagcagaccc
ctccccatgggccctccaccaacgccacatttcaacgttctgactgatactccctctgga
ttagtgccactgcaccaccgccctccacaggttccccctgctcagcagatgctgaacttc
ccagaaaagggcaaagacaagccaactgacctgcagaactttggcctccgtacagatatt
tactcaaagaagaatcccaagggcaaaggggctgctggtgggagagagtggactgagcaa
gaaacgttacttctgttggaggctctggagatgtataaggatgactggaataaggtttca
gagcacgtgggcagccgtacacaagatgagtgcatcttgcacttcctgcggctgcccata
gaggatcaatacctggagagctccgaagcctcgctaggccctctggcttaccagccgatc
cccttcagccaatcaggaaatcctgtcatgagcactgttgcatttcttgcctctgtggtt
gacccgcgtgtggcggcggctgctgccaaagcagctttggaggagttctcgcgtgtgcgt
gaggaggttcccatggagctggtggaggctcatgtgaagaaggtacaggaggctgcgcgc
agcacaggaaaagtagaccctgcattcggcctggagagcagtggcattgctggcacagct
cctgaggaaccagagaaaacagaacctacagagattgagaagatggacaatgactcgaat
tcccagcctgataaggcggagtcaaaggatgaagcagagaagcccagcgagtctgcggaa
aagccgacagagaccgagaaagaaaagaatgagactacagagaaatctgagccgcaggaa
gaggaagagagtgagggaggagaatccaagacagcagagaaagacaaagatgaggacatg
gagaccacagaggaagggaaggagggcgaggaagagaaggaagaaggaaagaaaaagctt
gagttggatatcggagagggcaacatcgctactgccgccgctgctgccctggcctctgct
gccaccaaggcaaagcacctggctgcagtggaagagaggaagatcaaatctcttgtggct
ctgctggtagagactcagatgaagaagctggagctcaaactcagacactttgaagagctg
gagaccatcatggaccgtgagaaggaagccctggagctccagaggcagcagcttttgaca
gagcgacaggcattccacatggagcagttgaagtacgctgagatgaaggctcgtcagcag
atggagcagcaggcagctgcacagcagaatgcaggagcacatcacggaccacctccacat
ggcccatctccgcacggcccccctccaggcatgcaccctgtacacccaggacatcccggg
cacccaggccctggatatccccccatgcaccataccatgggtccccaccatgcccctcag
acaggaccaatggttggaccaggccagcccatgccaggtcagcctatgccaggccgaatg
atgcctggacctcccccagttggacccccacagggtggcatgccgcccatgatgggacct
cgacaccctggaccacccaacggcatgtacccaggtccacctccaaccgcacagcctgat
gggatgccccctggcccagtgggacctcctgtatctgcgccccctcctcgtgctgctgaa
aactaa
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integrated database retrieval system
