Sinocyclocheilus rhinocerous: 107738000
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Entry
107738000 CDS
T04916
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04010
MAPK signaling pathway
srx04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107738000
04020 Calcium signaling pathway
107738000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107738000
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107738000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Dimer_Tnp_hAT
Motif
Other DBs
NCBI-GeneID:
107738000
NCBI-ProteinID:
XP_016405146
LinkDB
All DBs
Position
Unknown
AA seq
2339 aa
AA seq
DB search
MTDGEGREHFHYLERGEVRVPISALYRAPSPSEEIGDDEEKSSTWIPVHESSQAQGSRAR
DPTPDLVSDEEEQPPYPALAPVVFFCIKQTTRPRSWCLRMVCNPWFEHVSMLVILLNCVT
LGMFQPCEDLKCQSEWCVVLQVFDDCIFAFFAVEMVIKMIALGIFGSKCYLGDTWNRLDF
FIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLL
CFFVFFIFGIVGVQLWAGLLRNRCFMKDNVKALYNLSHMSPYYMNEEGEDNPFICSSNKD
NGMLRCSQVPPLKEGVECTLIASPPGHAYSGLDGTGNSSCVNWNQYYSECKPGELNPHKG
AVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVV
IATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEEMLRYISHLYRKVKRRASR
IYSGWQSKRRKKVNPNSGLSGGGGGGGGGGANGHSRHRGGGHWVRSIHNLIQQHQRQHCH
LSNGSPSPVTATGPGEALEMRSIAMGPQLTVSSQPTAMHNLSSRTQSVHSIYQGDFQEAP
QGRTSTAVGVPALGRLNSGMNYPTILPSLICSYTGSSSAGKGRRGSDANTGCDAIDPFEK
LHQLMGEHSHSRVLLQMAGVVPSPLLLELLSCPYCARALETMDVELGDSDYSRSEGDVVY
EFSHGAEFKPCRASHHKILEERNRLAQYWDDFRDRLIRIVNSKYFNRGIMIAILINTLSM
GIEYHEQPEELTNILEISNIVFTSMFVLEMLFKLLAFGIFGYIKNPYNIFDGIIVVISVW
EIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFS
ILGMHLFGCKFSLQMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTTPW
AALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDADEEKRSVNFEEEEKMGELRAT
ELKMYSLMMSANGHVDPRGTLPPPIIMRTAATPMPTPKSSLGPESVFGLTESRRGSGISI
DPNAFDQKSLTSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSGERESLLSGDG
RGSFEDEDLEVEKLANISVGSLQHPSSLDIPELPQTPSFSSLGDYHDCNGRSLHLPSELS
ANLSKEDSIAEEDMDDSFCFRLKRTFEAYKPKWCKDHEEWSLYLFSPQNKFRMMCQRLIS
HKLFDHVVLVFIFLNCITIALERPSIQPSERKFLSISNYVFTVIFVAEMTVKVVALGFCA
GKQSYLQSTWNVLDGVLVSVSLIDILVSLAYTGGNRILGILRVLRLLRTLRPLRVISRAP
GLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGGDTKNITNKSDCL
QANYKWIRRKYNFDNLGQPSMHVHESRHRGEAVLKEYEAAAAAATSAKPKSNKSQFPDLA
SLTQKYLSTPCPSIDSERLFPAAANVMDEKNTELVPVLSAAVVPSHPVPFSTASVIWFIC
VYPALTLLLSVCMTVSTEAQQRPYYADYSPARLYIHTLCTNHYLDLFITCIICINVVTMS
IEHFNQPHYLEEALKYCNYVFTIIFVIEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMG
ITLEEIKMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLL
FMLLFFIYAALGVELFGKLECNDNNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMK
DTLRECLPNESNCFSYLPLVSPIYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAE
MDAEIEMEMEMARRLSNVSAGSSSGPDGRATYVGPHPQKHGQDEGMQRTQENLLSPRKMS
VSRMHSLPNDSYMFRPVRPASAPYPLEEVEASQGYLELGSITSVHSQPCESHSLLQVPGV
PPHSQFNYLPKIPPPMPSPTHSIGRTLRRQKAIKNDSVDVQSFDSKDNPDRQAGITTGSF
KLRVPRITGPSIPQGSPLLPPRGHAPSVCTFQQPHSQHNIPSRPPSLASSSRSTSPSGSM
FDSADPTDEEVRHINSTARLWVGTQAEARSHSLSPYTTSGMLLPVPVKNCSSAANLSVKD
PKKCFSVDTEGFLEKPYGTDDHRRHSIEICSSVDEGLFGQELSEKRHVPMRGQSLHIPRK
KKMSPPCISIEPLFETEAPASLASMKKLSESSMLLRRRTPSYDLALQRDTLDLPENQLST
QPLIKVERHPSHCAEYLSLPHPTPMGGLAGILCENTQPPPFDSRFEESTDFSSVNRTAQ
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagaacactttcattacttggagagaggagaggtaagagtt
cccatttcagccctgtaccgagcgcccagtcccagtgaggaaatcggagatgacgaggaa
aagagcagcacatggatccccgtccatgagagctctcaggcacaggggtccagggctcgg
gaccccactccggatttggtctcggatgaggaggagcagcccccctacccggcgctcgcg
cctgtggtgttcttctgcatcaaacagaccactcgtccacggagctggtgtctcaggatg
gtttgcaacccatggtttgagcatgtgagcatgctggtgattctgctgaactgtgtgact
ctgggcatgttccagccatgtgaggacctcaagtgccagtctgagtggtgtgtcgtccta
caggtgtttgatgactgcatcttcgccttctttgctgtggagatggtcatcaaaatgata
gccctggggatttttggatcaaagtgttaccttggtgacacatggaaccgcctggacttc
ttcattgtcatggcagggatgatggagtattcactggacggtcataacgccagcctgtca
gccatccggactgtgcgagtgctcaggcccctgcgagccatcaacagagtgcctagtatg
aggatactggtgactctgcttcttgatactctgcctatgttaggcaacgtcctcctgctg
tgcttttttgtcttctttatattcggcattgtcggggtgcagctgtgggctggacttctt
aggaatcggtgtttcatgaaagataacgtgaaagccctttataatctgtcacacatgagt
ccgtactacatgaatgaagaaggtgaggacaaccccttcatctgctcctccaataaggac
aatggcatgctgcgctgtagtcaggtgccccccctcaaggagggtgttgagtgcacttta
attgcatctccaccgggacatgcctactctggcctggatgggacaggcaacagcagctgt
gttaactggaaccagtattacagtgagtgtaagcccggggagctcaacccacacaaaggg
gcagtgaacttcgataatattggatatgcctggattgcgatattccaggttattactttg
gaaggatgggtggacatcatgtattatgttatggatgcccactccttttacaattttata
tattttatattgcttattatagtgggttccttcttcatgatcaacctgtgcctggttgta
atagcaacccagttctcagaaacaaagcagcgtgagaaccagctgatgcaggagcagcga
gcacgttacctctccaacgacagcaccctcgccagctactctgagccggggagctgctac
gaggaaatgctcaggtacatcagccacctgtaccgcaaggtgaagcgccgtgcttcccgc
atctacagcggctggcagagcaagcgcagaaagaaggtgaaccccaacagcgggctgagt
gggggaggaggaggaggcggcggcgggggggccaatggtcacagcaggcacaggggtggc
ggacattgggttcgctccatccacaacctcatccaacagcaccaacggcagcactgtcac
ctcagcaatggcagccccagtcctgtgaccgctacggggcccggcgaggctctggaaatg
aggtccatcgcaatggggccgcaactgaccgtgtcctcacagccaaccgccatgcacaat
ctttcttccaggacccagtcagtgcacagcatttatcaaggtgactttcaggaggccccg
caagggcgaacgagcaccgctgtgggtgtgccggcgctcgggcgactaaacagcgggatg
aattatccgaccatcttgccctccctcatttgcagctatacaggcagcagttctgcaggg
aaaggaaggagggggtcggatgcaaatacgggatgtgatgcgattgatccctttgagaag
ctgcaccagctcatgggagaacatagccacagtcgtgtgctgctgcagatggctggtgtg
gtgcccagtccactgcttcttgagctcctgagctgcccgtattgtgcaagggccctggag
accatggatgtggagctcggtgattcagactactccagatcagaaggggacgtggtgtac
gagttctcccatggagcagagttcaaaccctgccgtgcatcccatcataaaatcctggag
gagcgtaaccgcctggctcagtactgggatgacttccgggacagattgatacgcatagta
aatagcaaatactttaatcgaggaattatgattgccatcctcatcaacaccttgagtatg
ggcattgaataccatgagcagcctgaggagctgacaaacattctggagattagcaacatc
gtcttcactagcatgtttgtcctcgaaatgctcttcaaacttctggcctttggcatcttt
ggctatatcaagaacccctacaacatctttgatgggattattgtagtcataagtgtgtgg
gagatcatagggcaggcggatgggggtctgtcagtgctgaggacgtttcgtctcctgcgt
gtgctcaaactggtgcgcttcctccctgctctgcgcagacagctggtggtcctgatgaag
accatggacaacgtggctacattctgcatgctgctcatgcttttcatcttcacattcagc
attcttggaatgcacctctttggatgcaaattcagcctgcaaatggagaatggagacacc
attccagacaggaaaaactttgattccctgctgtgggccattgtcactgtgtttcagatc
ctgacccaggaagactggaacgtggtcctctataatggaatggcttccaccaccccatgg
gcggctctgtactttgtggctctgatgacttttgggaattatgtgctctttaacctactg
gtggccatcttagtggagggatttcaggcagagggagatgctaacaggtcagatgcagat
gaggaaaagcgctcggtgaactttgaagaggaagagaagatgggggaattacgagctaca
gagttgaagatgtactctctgatgatgtcagcgaatgggcatgtggatcctcgaggcact
ttgcctcctccaatcatcatgcgcactgctgccacccccatgcccactccgaagagctca
ctcggccccgagtcggtgtttggtttgaccgagtccaggcggggcagtggcatctcaata
gatccaaatgcttttgatcaaaaatccctgactagcccaagaagatctccatgccacccc
cgtggctcaggcagtaactggggcagccgcaggtcaagctggaacagcttaggacgggcg
ccaagtttgaaaaggaaggacacgtctggggagagggagtctctgctgtctggggatggc
aggggcagctttgaggacgaagacttggaggtggagaagctggccaatatcagtgtgggc
tcactgcagcatcccagctctctagatatccctgagctgccccaaacccccagcttcagc
tcactgggagactaccacgactgcaatggaagaagcctgcacctgccatctgagctgtct
gccaacctcagcaaggaagactccattgcagaggaggacatggatgatagcttctgtttc
cgtctcaagaggacgtttgaggcatataaacctaagtggtgtaaagatcatgaagagtgg
tccctttacctgttctctcctcagaacaagtttcggatgatgtgtcaaaggttaatttct
cacaagttgtttgatcatgtagtcttggtattcatcttcctaaactgcattaccattgct
ctggaaagaccctctattcagccatctgagcgaaagttcctcagtatctccaattatgtt
ttcactgtgatttttgttgctgaaatgactgtgaaggtggtggccctcggcttctgcgcc
gggaagcaaagttatctgcagagcacctggaatgttctggatggggtgctggtctctgtc
tctctcattgacattctggtctctctggcctatactggtggaaaccgaatccttggcatc
ctgagggttcttcgtctgctgagaactctgcggccgctgagagtgattagtcgtgctcct
ggactgaagctggtggtggaaacgctaataacgtccctgaggcccattgggaacattgtg
ctgatctgctgtgccttctttattgtctttggcattcttggagttcagctcttcaaagga
aagttttaccattgtgaaggtggcgacaccaaaaacatcaccaataagtctgattgtctt
caagcaaactacaaatggattcggagaaagtacaactttgacaacttgggacagccttcg
atgcacgttcacgagagtcgtcatcgcggcgaagctgtactaaaagaatatgaagcagcc
gcggcagcagctactagcgctaagcccaagtcaaataaatcccagttcccagaccttgcc
tcacttacacagaaatacctgtcaaccccttgccccagcatagacagtgaacgtttattt
cctgctgctgcaaatgttatggatgaaaaaaacacagaattggtaccggtcctctctgca
gcagttgtcccctcacacccagtgcctttttccactgcatcagtgatttggtttatctgt
gtttaccctgcactgactcttctgctgtctgtctgtatgactgtatcaacagaggcccag
cagagaccgtactatgcagattactctccagcccggctctacatccacacactgtgtacc
aaccactacctggacctcttcatcacctgcatcatctgcatcaatgtggtcactatgtct
attgagcatttcaatcagcctcactaccttgaagaggcactgaaatactgtaactatgtc
tttaccatcatcttcgtaattgaggctttactcaagcttgtggcatttggttttcggaga
ttcttcaaagacagatggaaccagctggatctagccatagtcctgctctctatcatgggc
atcaccctggaggagatcaagatgaacgcagcactgccaatcaaccccactatcatccgc
attatgagggtgctgagaatagccagagtactgaagcttttgaagatggctacaggcatg
agagccctgctagacacagttatgcaagctttaccacaggtgggaaatctgggcttgctg
tttatgctcctcttcttcatttatgcggcacttggcgtggagctttttgggaaactagaa
tgcaatgacaacaacccatgcgaaggattaagcagacatgctacatttgagaactttgga
atggcctttttaacgttattcagagtatcgacgggggacaactggaatggcataatgaag
gacactctgcgagagtgccttccaaatgaaagtaactgcttcagctatctgcccctggtt
tcccccatctacttcgtcacctttgtgctaatcgctcagtttgtgctggttaacgtggtg
gtggccgtactgatgaaacacctggaggagagcaataaggaggctaaagaagatgcagaa
atggacgctgagattgagatggagatggaaatggctcggcgtctcagcaacgtctcagca
gggagctcttcagggccggatggaagggcaacttatgtaggaccacacccgcagaagcat
ggacaggatgaggggatgcaaagaacacaggagaatttgctctctccacggaaaatgtca
gtgtcaaggatgcactctttgcccaatgacagctacatgtttcgccctgtgaggccagcc
agtgctccttatccactggaagaagtggaagccagtcaagggtaccttgaattaggctct
atcacctcagtccactcccagccatgcgaaagccattccctgctccaggtccccggtgtt
cctccccattcccagttcaactacctccccaagattccccctcccatgccctctccaacc
cacagcataggcaggactttacgcagacagaaggcaattaaaaatgactccgtcgacgtg
caaagtttcgactccaaagacaatcccgacagacaggcaggaataactacaggcagcttc
aagctgcgtgttcctcggatcaccggacccagcatccctcaggggtcacccttgctgccc
ccacgtggacatgcccccagtgtctgcaccttccagcagccccatagccagcacaatatc
ccttccagacctcccagcctggccagcagcagcagaagcaccagccccagtggctccatg
tttgattccgccgatccgaccgacgaggaggtccgccacatcaacagcacagcacggctg
tgggtagggactcaggcagaagcccggagtcactccctgtctccttacaccacctcaggg
atgctgcttcccgtccccgtgaagaactgcagcagtgctgctaacttaagcgtcaaagac
ccgaagaagtgcttcagcgtggacacggagggttttctggaaaaaccctatggtactgat
gaccatcgcaggcactcgattgagatttgctcttcagtagatgaagggctgttcggtcaa
gaactcagtgagaagaggcacgttcccatgcgtggacagtcgttgcacattccccggaag
aaaaagatgagccctccctgtatctccattgagcccctgtttgaaacggaggctcccgct
tctctcgcatccatgaaaaagctgtcggagagcagcatgctactacggaggaggacgcca
tcctatgacctggccctgcagcgggacactctggatttgccggagaaccagctgtctacc
cagccgctcatcaaagtagagcggcacccctctcactgtgctgagtatctgtccctgccg
caccccaccccaatgggcggactggcaggcattctgtgtgaaaacacacagccgcccccc
tttgacagccggtttgaagaatccacggacttcagctctgtaaacaggacagcccaatga
DBGET
integrated database retrieval system
