Sinocyclocheilus rhinocerous: 107738050
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Entry
107738050 CDS
T04916
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107738050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107738050
03019 Messenger RNA biogenesis [BR:
srx03019
]
107738050
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107738050
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107738050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
107738050
NCBI-ProteinID:
XP_016405215
UniProt:
A0A673IBS0
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MQELISCVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACMKGGMCPFRHI
SGEKSVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGATEQPP
LPQQAQSQQKQQNMQPTNRSSQSLIQLTNTNVNNNQRMPNAVGIVHSNNNMGGPRGPRPL
DQVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattaatctcgtgtgtcgatcatatcaagtttgatctagaaattgcagtagaa
caacaattaggcgctcagccattgccatttccaggaatggataaatctggcgccgctgtg
tgcgagttcttcatgagagctgcctgtatgaaaggtggaatgtgtcctttcagacacatc
agtggagaaaagtctgtggtgtgcaaacactggcttagaggtttatgcaagaaaggagac
caatgtgaatttttacatgagtatgatatgacaaagatgcctgaatgttatttctactct
aaatttggggagtgcagtaataaagagtgtccatttttgcacattgacccagaatctaag
attaaagattgcccatggtatgataggggcttttgtaagcatggtccggattgcaggcac
agacacacaagaagagtaatctgtgtaaattaccttgttggcttctgtccagagggcaag
tcatgcaaatttatgcacccaagatttgaactccctatgggtgcaactgaacagccacca
ttaccacaacaggcacagtctcagcaaaagcagcaaaacatgcagcccacaaaccggtca
tcacagtcactcatccagttaaccaacaccaatgtcaacaacaaccagagaatgccaaat
gctgttgggatagtgcactctaacaacaacatgggtggacctcgcggtcctcgtccactg
gatcaagttacatgttacaagtgcggtgagaagggccattacgcaaacaaatgcacaaaa
ggacacctggcgtttttgagtggacagtaa
DBGET
integrated database retrieval system
