Sinocyclocheilus rhinocerous: 107738059
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Entry
107738059 CDS
T04916
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107738059 (focad)
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107738059 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
107738059
NCBI-ProteinID:
XP_016405224
LinkDB
All DBs
Position
Unknown
AA seq
1805 aa
AA seq
DB search
MTETLKTRFEFPSSLIQAQAVRTLVTAVLKEKGQNERICQTTAKGQALESLWEQCSSDST
VVRSACCDVLVLLVEQGHADLPYVLNTTLNLLPSARNVQGLIKVVGRLLQIQASQRDNGA
SFTCPYSIRTFPHPYITVLENRPDCWPALLQEIDDFLQLATDKDEPVYVEMLVPFLRYLY
CEPQRLSENALLRHSLLRVLLQPRGAPEPDSPQEKGASGTRVVRGLIRSLFDLLPYMLVD
SVTAVVEFSSFAESLTSALLTDPGFWRKELTELALQLLCACQLSVHLGGEPMSLLHTLHQ
IIPAHAEELPSEQVIIGISLLLLSASTSQQTALLELAVKLVPPEVPPPWGVSLLVMPLLQ
VLSCSSLMEALTDLQTHTKNLKLANSLLQTVQREPSDRKEGSTQLSLPLSTWYSELQVAT
SVLHRISIDSMSTVEWLYSLQSLLSVCEHVPDTVCLLVSHVIVSSHGDLCRLALHTAAAI
AEADPAKVPCLLPILMFKLSRVSDPALSHSVLYTLPKLGTHKFCIPQVLHVLQTLGSSSR
LRPVALRLLTLLWQKQDRVYPDLQRLMSQLEKSSVVMGKDTQWEQILARAACVRDICRER
PYQHGGDMLAAITDTLMQFSRNDQATPAALALQGLQELCRAEVVDIVSTWKALSPKLCCD
TRPLVLKATAELLALVPALNVKTEEYEKFRNEAVCVLWGYALSQDPEVASQGFKALSEYP
EPSHTILHLPEQARPVPKQPEEEDEGKENEKDEDISVPGASYVKLVCLTPQSVLPALETF
LTALVRQEMNQMPRGVYHSALSGGNLRSDQGKTVSGIPSFMLKTYEKNKQPGLKPGLAAG
LLLCYDLPVQTDKDGRPITRFLVSRGRSYQQMLATLIHEVNIQPSEWHRSLLLPQAWRGF
MSRAYHAALQGRKAELEMLQKQGKESPEELQYKQHYAWLWVRDQLTDVVKSAAKDSPVVQ
GNSILALSGLAVVLTRYESNLPTQSESGLEVGPDILPTVHWLSMVIDTLLSIVSSNSNPK
GQVFPWFIHRSYSGENTASVIARSCAALGLALLVPVLVTSCRENVPAILGTLAAGLPGSP
TADESQALQFHSGLALGMFLAWLHDERVSDISGQSVAELLMKHLERLEDCCFNPNLEYNA
GCVLGVGLVLSSLSSSSQSERDRVHVSLTLDRLLQTLQDSSNMSRMLQEVLAYSVACVGV
SAFSAGIIEASKAEESMNTLRTLTEESQQTPGFALALGLTVFGLSSFGHGKAVGIQPRLL
AAWTKILLAEGCPTMQRLSALNGLIALVGSEMTLIQLKSESEESSQQQGRLNEVIRAITQ
IITFSGTIGLQSNGACLLGHLHLAHMSSSHSRTAVPQDFGYLPEKSVIRASVDFITEAGR
KGPEFTPPRLVKTVLAPLGTVGGSFQYPPVNWSAILSPLMRLGFGEEVQHHCLALAASQA
QSSQSASLFLGIWLVPPLVHSLSIRTRVSLYECLSSWMKHVAEDKLQVYVDSLAVQQFVP
DTRPQRLPLCLSILHGLAKAMAVPNPPQNCWTALCSTTEKIYNLLPDNIPAGEVDLYEAT
CSCLSELSDTEIDRIVKVTEANVEKTAFILSYLTSKGRVPLLGLNDVISTILQVGNKKRI
SWLLLQALHQSRFTSSPNTVVSKRMEWLLELMGHIRNVAYGSPSVKCVNLIEGTDFLLGV
FAAAVVSWADHCTPLLVGIRAQWFPWQQSSRTTELSHDLYVNPDATELSLASCLLGIPYS
IKQLLAKEPWKSQSQKFIDWLFSITEGPKLGFSETALLTAKATLMALRSSSEFKKKGVWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaactttgaagaccaggtttgagttccccagctccctcattcaagcccaggct
gtgaggacgctggtcactgcagtgctgaaagagaaaggccaaaatgaaaggatttgtcag
accacagctaaaggtcaagcgctggagtctctgtgggagcagtgcagcagtgacagtacc
gtcgtccgctctgcctgctgtgacgttctggtgctactcgtagaacagggtcatgcagat
ctgccgtatgtgctcaacaccacccttaacctcctgccctcggcacggaatgttcaaggg
ctgatcaaagtggttgggaggctgctacagatccaggcaagtcagcgggataacggagca
agcttcacctgtccatattcaattaggaccttccctcacccctacatcacagttctggaa
aaccgtcccgactgctggcccgctctgctccaggaaattgatgacttccttcagctggct
acagacaaagatgagccagtatatgtggaaatgttggtaccttttcttcgttacctgtac
tgtgagccccagaggttgtcagaaaatgccctgctcagacacagcctcctcagggtcctg
ctccagccacgaggggctcctgagccagacagcccgcaggaaaagggggcatctggcact
agggtggtccgtgggttaatacgcagcctctttgacctgcttccatacatgctggtggac
agtgtgacagcagtggttgagttcagctcatttgctgaatctctgacgtcggctctgctc
accgatccaggcttctggagaaaggaactgaccgagctggctcttcagcttctgtgtgcc
tgtcagctaagtgttcatctaggaggagaaccgatgtctctccttcacacactccaccag
ataatacccgcacatgcagaggaactcccgtctgagcaagtgatcataggaatctccctg
ctactgctaagtgcctccacctctcaacaaactgccctcctagagctcgctgtaaagctt
gtccctcctgaggttcctcctccctggggagtgtctttgctagtgatgcccttgttacag
gtgctgtcctgctccagcctcatggaagctctgacagacttgcaaacacacacaaagaac
cttaaactggccaattcactgttgcaaacggttcaaagagagccctccgatcgaaaagag
ggctccacacagctgagtttgcctctcagcacttggtacagcgagctccaagtggccacc
agtgtcctacaccgaatttccatagactccatgtctactgtagaatggctttactccctg
cagtcattactctctgtctgtgaacacgtcccagatactgtttgtctcctggtgtcccat
gttatcgtcagcagtcacggggatctctgcaggttagcactgcacactgccgctgccatc
gcagaggccgatcctgctaaggtgccatgtctacttcctatcctgatgtttaaactgagc
agagtgtctgatccggctttgtctcactctgttctctacactctgccaaaactgggaacc
cacaagttctgcatcccgcaggtgcttcatgtcctccaaactctgggcagttcatccaga
ctgaggcctgtggctctgcgcctcttaactctgttatggcaaaagcaggaccgtgtgtat
ccagacctgcagagactgatgtcacagcttgaaaaatcctcagtggtcatgggaaaagat
acgcagtgggagcagatattagccagagcagcctgcgtcagagacatctgtagagagagg
ccgtaccagcatggaggagacatgctggccgccatcaccgacacgctgatgcagttctcc
aggaacgatcaggccactcctgctgctctggcactgcagggcttacaggagctctgtaga
gctgaggtagttgatatcgtctccacatggaaggcactctctcctaagctgtgctgtgac
accagacccctggtcctaaaggccacagctgaacttctggcattagtgcctgctttaaat
gtcaaaactgaagaatatgagaaattcagaaacgaggcagtctgtgttttatggggctac
gctcttagtcaggacccagaggttgcgagccagggttttaaagctctctcggagtaccct
gaaccatctcacaccatcctacacttgccagagcaggccagacccgtaccaaagcagcct
gaagaagaggatgaagggaaggaaaatgagaaggatgaagatatttcagtaccaggggcg
tcatatgtgaagctagtttgtctcacaccacaatccgttttaccagcccttgagaccttc
ctaacagctctagtcaggcaggagatgaaccaaatgccccgtggcgtgtaccattcagct
ctgagtggagggaatttgcgctctgaccagggaaaaactgtatctggaattccttctttt
atgctgaaaacttatgagaagaacaagcagccgggtctaaaacctggcttagcagctggg
cttctactctgttatgaccttcctgttcaaactgacaaagatggacgtccaatcacccgc
ttccttgtcagcagagggcggagttatcaacaaatgttagccacccttattcatgaggtg
aacatccagccgtctgaatggcatcgctctctgctcttgccccaggcctggcgaggcttc
atgagccgggcttaccatgcagctctccagggtcgaaaggcagagctggagatgctacag
aaacagggtaaagagagcccggaggaactgcagtacaaacagcactatgcctggctctgg
gtcagagaccaactgactgatgtggtcaaatctgccgccaaagatagtccggttgttcaa
ggtaattctatcttggcattaagtggcctggctgtcgtcttaaccagatatgagagcaac
cttcctacacagtctgaaagtggacttgaggtgggtccggacatccttcccacagttcac
tggctgtcgatggtgattgacacgctgctcagcattgttagcagtaacagtaaccctaaa
ggacaagtcttcccatggttcattcatcgctcctactccggtgagaacacagcgagtgtg
atcgcgcgctcctgtgctgctctgggtctggcgttgttggtgccagtgctggtgacctcg
tgcagagagaacgttcccgctatcctgggcactctagcggcaggactgccaggatcgccc
accgcagacgaatctcaggcactgcagtttcacagcggcctggctctgggcatgtttcta
gcgtggctgcatgacgagagagtcagtgatatatctgggcagtcagtggcagagctgctg
atgaagcatctggaacgactggaagattgttgctttaatcccaatctggagtataatgct
ggttgtgtgttaggtgttgggttggtactcagttctctcagtagcagtagtcagtctgag
cgggaccgtgtgcatgtgtctctcacgctggacagactcttgcagaccctgcaggacagc
agcaatatgagccgcatgctgcaggaggttttggcctattctgtggcatgtgttggagtt
tcagcatttagcgcaggcattattgaggccagtaaggcagaggaaagcatgaatacactt
cgcaccctcacagaggaaagccaacagacaccgggctttgctttggcattgggactgaca
gtgtttggactctcttcttttggtcatggtaaagcagtgggcatccaacctcgtctgctg
gctgcctggaccaagatactgctggcagagggttgtcccacaatgcagaggctgtctgcc
ctcaacggactgattgcattagtgggatcggagatgactctcattcagctgaagagtgaa
tcagaggagtcctcacagcagcagggcagactgaacgaggtcatccgagccattacacag
atcatcaccttttcgggaacaataggtctgcagtctaatggagcatgtctgcttggacac
ctgcatctggctcacatgtccagcagccacagccgaaccgcagttcctcaggactttggt
tatctcccagagaaaagtgtcatccgagcttcagtagacttcatcactgaagcaggaagg
aaaggacctgagttcactcctccacgtctagtgaagacggtgctggcccctttagggacg
gtcggtggaagcttccagtatcctcccgtcaactggagcgccatcctctctccgctgatg
agactcggctttggtgaggaggtgcagcatcactgtttagcgttagctgccagtcaggcc
cagtcttcccagagtgcctcacttttcctcggcatctggcttgtgcctcccctggttcac
agcctgagtatccgcactagggtttctctctacgagtgcctgagctcctggatgaagcac
gtggctgaagacaaactgcaggtgtatgtggacagtctggcagtccagcagtttgtgcct
gacacacgtcctcagcgcctgcccctgtgcctgtccatcctgcacggcctggccaaagcc
atggcagtccccaacccgccacaaaactgctggaccgccctgtgctccaccactgaaaag
atctataacctcttacctgataatataccggctggtgaggtggacctgtatgaagccacg
tgttcatgtctgtctgaactgagcgacactgagatagaccgcatagtcaaagtcactgag
gctaatgttgaaaaaacagcgttcatcctatcctacctgacctctaaaggcagagtccct
ctgcttggactcaatgatgtcatcagtaccatcctccaggtggggaataagaaacgaatc
agctggcttctcctgcaggccctccaccaatcacggttcacttctagtcccaatacagtg
gtctctaaacgaatggagtggcttttggagttaatgggccacatccgaaatgtagcatac
ggatctccttctgtgaaatgtgtcaatcttatagagggcacagacttcctcctcggtgtg
tttgctgcagcagtggtgtcttgggctgaccattgcaccccgcttctcgttggcatcagg
gcccagtggtttccctggcaacagtcctctcggacaacagaactgtcccatgacctctat
gtcaaccctgatgccactgagctgtcgctcgcctcatgcctacttggaatcccatacagc
ataaagcaactactcgccaaagagccgtggaagtcacagtcgcagaagttcatcgactgg
ctcttcagtattacagaaggtcctaaactaggtttctctgagactgccttactaacagcc
aaagcgacgctaatggctctgagatccagctctgagttcaagaagaagggtgtatggacc
agggcgtacggctggtga
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integrated database retrieval system