Sinocyclocheilus rhinocerous: 107738180
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Entry
107738180 CDS
T04916
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03015
mRNA surveillance pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107738180
09123 Folding, sorting and degradation
03018 RNA degradation
107738180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107738180
03041 Spliceosome [BR:
srx03041
]
107738180
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107738180
mRNA cycle factors
Stress granule specific factors
107738180
Spliceosome [BR:
srx03041
]
Complex C
Other components
Complex C specific factors
107738180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
Motif
Other DBs
NCBI-GeneID:
107738180
NCBI-ProteinID:
XP_016405434
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MLFERFRSLGSVQSIRVCRDRLSCRSLGYAYVNFERAADAERALDTMNFDLMQGKPMRLM
WSQRDPSLRKSGVGNIFIKNLEKSIDSEGLYDIFSSFGTILSCKVVCDENGSKGFGFVHF
ETHEAAGEAIEKLNSMLINEQKVFVGHFKSQKEREAEMQARNKEFTNIYIKNFGTDVDDE
MLAEIFNQFGPTLSVRVMTDEKGHSRGFGFASFEKHSDAKRAVEELNRTELNGRRVFVGR
AQKRRERQVELKRRFEQIRQERMMRYQGVNLYVKNLSDSVDSERLLREFSPYGNITSAKV
MTDGGRSRGFGFVCFSSPEEATRAITEMNCRIIDSKPIYVALAQKKKERQTLLIHQHMMR
RQQLEAYRPKPHAEQVQDLSSYHLTQPQPSSQWDAQSVSPRVNLPRCAPQHIYTPEVHHH
HEFTSDPQQQWAVQQVQETLSSADNQKQMLGLSLFPLVQDAVGPLANQITEMLLETDESE
LLQLLQCHQSLCMKVNEALAFLQSHQQFSSPVIPAV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgagcgcttccggtcgctcggttcggttcagtcgatccgagtctgcagagac
cgactcagctgccgctcgctcggatacgcgtacgttaacttcgagcgagccgccgacgcc
gagcgagccttggacaccatgaactttgacctcatgcaggggaagcccatgcgtctgatg
tggtcgcagagagacccttcgctgaggaagagcggcgtgggaaacatcttcatcaagaac
ctggagaaatccatcgacagcgagggcctgtacgacatcttctcctccttcgggaccatc
ttatcctgtaaagtggtttgcgatgaaaacgggtcgaaaggctttgggtttgtgcacttt
gagacgcatgaagctgctggagaagccatcgagaaactgaacagcatgttgatcaatgag
cagaaagtgttcgtgggacacttcaagtctcaaaaagagcgcgaggctgaaatgcaggcg
agaaacaaagagttcacaaacatctacatcaagaactttgggacggatgtggatgacgag
atgctggcggagattttcaatcaattcggcccgaccctgagcgttcgggtcatgacggat
gagaagggacactcgagaggcttcggtttcgccagctttgagaagcacagcgatgccaaa
cgggcggtggaggagctgaaccggacggagctgaacggcaggcgggtgttcgtgggtcgc
gctcagaagagacgagagcgtcaggtggagctgaagcggcgcttcgagcagatcaggcag
gagcgcatgatgcgctatcagggcgtgaatctgtacgtgaagaatctgagcgacagcgtg
gacagcgaacggctgctcagagagttctctccatacgggaacatcaccagcgctaaggtg
atgacagacggcggccgcagccgaggcttcggattcgtttgcttctcgtctcccgaagag
gccaccagagccatcactgagatgaactgccgtatcattgattccaagcccatatacgtg
gctctggcccagaagaagaaggagcgtcagactctgctcatccaccaacacatgatgaga
cgccagcagctggaggcctaccggcccaaaccacacgctgagcaggtgcaggatctctct
tcataccacctcacacaacctcagcccagctctcaatgggacgcacagagcgtcagccct
cgggtgaatctgcctcgttgtgcaccgcagcacatctacactcctgaagttcaccatcac
cacgagttcacaagcgacccgcagcagcagtgggctgttcaacaggtgcaggagactctg
agctcagcagacaaccagaagcagatgctgggtctcagtctcttcccgctggtgcaagac
gcggtcgggccgctggcgaatcagatcacggagatgctgctggaaacggatgagtctgag
ctgctgcagcttctgcaatgccatcagtctctgtgcatgaaggtgaacgaagcgcttgct
tttcttcagtctcatcagcagttcagcagccctgttattccagccgtctga
DBGET
integrated database retrieval system
