Sinocyclocheilus rhinocerous: 107738215
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Entry
107738215 CDS
T04916
Name
(RefSeq) coatomer subunit alpha-like
KO
K05236
coatomer subunit alpha
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107738215
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107738215
Membrane trafficking [BR:
srx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107738215
Exosome [BR:
srx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107738215
Exosomal proteins of bladder cancer cells
107738215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
107738215
NCBI-ProteinID:
XP_016405438
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDAEGVTLFDVQQK
RSLATVKIAKVKYVVWSSDANHVALLAKHAIMICNKKLESLCNIHENIRVKSGAWAENEV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK
LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAESLKETFDL
EKEMVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGRAGQMVADLDMDAS
GGEGWGEDAELHLDEDGFMDAQEGLGDEGAIGKEEGGGWDVEEDLDLPPELDVPSVGGGG
AEGDGFFVPPTKGTSTTQMWCNNSQLAVDHLLAGSFETAMRLLHDQVGVVQFGPYKQLFM
QTLSRGRTCYLGLPSLPCLHSYPQRNWKDSGAKGGLPAVGLRLSDLISRLQQCYQLTTAG
RFEEAVDRFRAVLLKR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaatttgaaacaaagtcggcccgagtgaaagggctgagtttccacccgaaa
cggccctggattctggctagtttgcacaacggcgtcatccagctgtgggactatcgcatg
tgcaccttaatcgacaagtttgacgagcatgatggtccagtcagaggtattgactttcat
aagcagcagccactgtttgtgtcaggaggagatgactacaagatcaaggtgtggaactac
aagctgcgccggtgtctctttactcttcttggacatcttgactacattcgtaccacattc
tttcatcacgagtatccctggatcctgagtgcctcagatgatcaaaccattcgcatttgg
aactggcagtccagaacatgtgtctgtgtgctgacggggcataatcactatgtgatgtgc
gctcagttccatccatctgaggacctggtggtgtcggctagcttggatcagactgtgcgc
gtgtgggatatttccggtctgaggaagaagaacttgtctccgggtgctgtggacacggag
gtgcgtggcatctctggtgtcgacctgtttggggcctctgatgcagtagtgaagcacgtt
ctggagggtcacgatcgaggcgtaaactgggcagccttccatcccagcatgcctctcatt
gtgtcaggagcagatgaccgccaggtcaagatctggaggatgaacgagtcaaaagcatgg
gagttggacacctgtcgagggcactacaacaatgtgtcctgtgcggtgttccatcctcgt
caggagctcatcctgtccaactctgaggacaagagcatccgtgtgtgggatatgtccaag
aggacaggcgtccagacctttcgcagagatcacgaccgtttctgggtgctgggggctcac
cccaacctcaacctgtttgctgctggccatgacagtgggatgctggtgtttaaactggaa
agggaacgtccagcttatgccgtgtatgggaacatgctgtactatgtaaaagatcgcttc
ctgcgtcagcttgacttcaacagcagcaaggatacagccgtcatgcagctgcgcagtgga
tccaaattcccagtgttcagcatgtcctacaaccctgcagaaaatgctgtgctgttgtgc
actagagctactaacctggaaaacagcacatatgatctgtattccattcccagagagagt
gactcccagaatcctgatgctccagagggaaagcgttcctctggtctgactgcggtttgg
gtggctaggaaccgctttgctgtactcgaccgcatgcactcactcctgataaagaacctg
aagaatgagattgtgaagaaggtccaggtaccgagctgtgaggagatcttctatgctgga
actggatctctgctgctgcgtgatgctgaaggagtcacgctatttgacgtgcagcagaag
cgctccctcgctacagtcaaaatcgctaaagtcaaatatgtggtgtggagctccgatgcc
aaccatgtggccctgctggccaaacacgccatcatgatctgcaacaagaagttagagagc
ctgtgtaacatccatgagaacatcagagtgaagagtggcgcctgggccgagaatgaagtc
ttcatctacaccacctccaaccacatcaaatatgctcttacctccggtgatcatggtata
atccgtacattggatctacccatctatgtgacaagagtcagaggcaacagtgtgtactgt
ctggatcgtgagtgcagaccacgagtgctcaatattgaccccactgagtaccgttttaaa
ttggctctggtcaatcgcaaatatgaagaggttcttcatatggtgcgtaacgctaaactg
gtaggccagtccatcattgcctacctgcagaagaagggctacccagaggttgcgctgcac
ttcgtcaaagatgagaagactcgtttcagcctggctctggagtgtggaaacattgaggtg
gcgttagaggctgcaaaagccctggatgaacgtagctgctgggagcgtctcggcgaggct
gcgcttctgcagggccatcaccaggttgtggagatgtgctaccagagaaccaagaacttc
gacaaactcaccttcctgtaccttatcactggcaacctggccaaactcaggaagatgatg
aagatagctgagataagaaaggacatgagtggacactatcagggtgctctttatctgggt
gacgtcagtgagcgtgtgcgaatcctgaagaactgtggacagaagtctctggcttacctg
actgctgccactcatgggatggatgaggaggctgaatccctgaaggagacctttgacctg
gaaaaagaaatggtgccagaagtggaccccaatgcccagctgttgcagccgccacctccc
atcaaccccttggataccaactggcctctgctcaccgtctccaagggcttcttcgaggga
gccattgctgccaaaggacgtgctggtcagatggttgctgacctggacatggatgcttca
ggaggagaaggctggggagaagatgcagaacttcatttggatgaagatggatttatggat
gctcaagagggattgggagatgagggagctattgggaaagaggaaggaggaggctgggat
gttgaggaagatctggacctcccgccagaactggatgtaccttctgttggcggaggtggc
gcagagggcgacggtttctttgtgccacccaccaagggcacaagcaccacgcagatgtgg
tgcaacaactctcagctggcggtggatcacttattggctggatcttttgagactgctatg
aggttgctgcatgaccaggttggtgtggttcagtttggaccctataagcaactgttcatg
caaactctgtcccgtgggcgcacctgttacctgggcctgccgtctctgccctgcttacac
agttacccccagaggaactggaaggacagcggggctaaaggaggtctgccagcggtgggc
ctgcgtctctctgatctcatttcccgcctgcagcagtgctatcagctgaccacagcaggg
cgctttgaagaagctgttgatcgtttcagagccgttctcctaaaaagataa
DBGET
integrated database retrieval system
