Sinocyclocheilus rhinocerous: 107738605
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Entry
107738605 CDS
T04916
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107738605
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107738605
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107738605
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107738605
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107738605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_4
Cadherin_CELSR2_9th
DUF7171
He_PIG
NOMO1-like_2nd
PepSY
Motif
Other DBs
NCBI-GeneID:
107738605
NCBI-ProteinID:
XP_016405858
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MMCQSANEMWSRWSAMLVWIFLLLCCSADVVSTIIYQVTEEQPPNTLIGSLASDQGLPDT
GHLYKLEVGAPFLRVDGKTGDIYTTEIPIDRETLKDCRNLFEGDPCFLEFEVSITDLMKG
TGPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGSNGIADYA
LTTGPEAANLFSLQVAQDSDEKLPQLIVLGNLDREQRDSYDLNIKVVDGGSPPRQSSALL
RITITDANDNVPKFEKSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQASPTV
QRLLSIDRNTGTIFVKGLVDREEISMLKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPS
IRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRPAS
ETGNDRKRKYFLQTTMLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNSPVF
SPSLYEVEFAEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRV
MSQLDREQLNHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMP
PLSPVGMVTVNDRDEGENARVQLSVEPDNGKFMIQNGTYTILSTISFDREKESTYSFRLK
AIDGGDPPRSSYVGITINVLDENDNAPYVTKPSNSSYKFLDPRTSPETHVESVEAEDIDI
GLNSELDFSIVGGNPHGLFRISSEGEITLAKEFTSKHIGLHRLVVKVKDKGMPPRHTTAL
VHIYVNETIGNVSHIEGLVGHSLYTPLEMDIAGDPDYSRDPHSNIIFAVLGGFCVVILII
AVAMIIRHVVLKENKSGYQAGKKETKDLYAPKPGPKSNKNKKIKKSKAPKPANPSEEDEG
GSLQKGLKFNLMNDSVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKK
HQAVQDLPATNTFVGTGDNNSTGSDQYSDYSYKANSSKYSTKQLPHRRVTFSTANQAQDL
QDPSQHSYYDSGLEESETPSSKSSLGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRP
LPDVAMTGKCTHECTEYGHSDSCWMPGQPSPNHAKSAKSGPKLSTFVPYQEREDQEHLMA
DSSSKLHREERSGGGSNKVASVRFLPPYTSAYSTGGDSSKDCPREEIPLSQTADYAPATT
PSSQGSKREIYL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgccagagtgccaatgagatgtggtcacggtggagtgccatgctagtgtggatt
ttccttctcctctgttgctctgcagatgtagtcagcaccatcatctaccaggtgaccgag
gagcagccgcctaacacactgattggcagcttggcatctgaccagggcttgccagacacc
ggtcacctttacaaactcgaggtgggcgctcctttcctccgtgtggatgggaaaacaggg
gatatctacactacggagatcccgatcgatcgtgaaactctcaaggactgtcgcaacctt
tttgagggcgatccttgtttcctagaatttgaggtgtctattacagacctaatgaaagga
acaggacctcggctcatcgaaggccgcatcgagatcttggatgagaacgacaacactcca
cagttctcttcacctgtcttgacattgtcgatcccggagaacacgcacgtgggtgcgctt
ttcgcaattcctgtggccaccgacagggattctggaagcaatggcattgccgattacgcg
ctaacgactggccctgaagctgccaaccttttcagcctgcaggtggcgcaagactcagat
gagaaattgccacaactcattgttttgggaaacctggatagagagcagcgagattcatat
gacctcaacataaaagtggttgatggtggctctccaccccgccagagtagcgccctgctc
aggatcaccattacagatgccaatgacaatgtgcccaaatttgagaagtcacactatgag
ggtgagctcccagaaaacagcccagtgggtcattctgttctacaagtgaaggccaatgac
tctgatatgggacccaatggagaggtgacctacagcctccaccaggcatcaccaactgtc
cagaggctcctcagcattgaccgcaacacgggcaccatttttgtcaaaggcttggtggat
cgtgaagagattagcatgctcaagttctacgtccaagctaaagacaatggtccacaatca
aagagctccaaagcccttgtgactattacagtgaaggaccagaatgacaatgcaccctcc
atcaggatccggggcattggccttgtgacgcatgaagatggtgtcgctaacatatcggag
gacatgcctgtaggcacagctgtggctctggtggaggtatcagatcgtgatgaaggtgaa
aatgcagttgtgacctgtgtggtcgcaggggatgtcccattccagctgcgtccagctagc
gaaacaggcaacgaccgcaagaggaagtacttcctccagacaaccatgctactggactat
gaacggatcaaagactacaggattgaaattgtggcagtggactctggcaaccctgcacta
tccagcacaaattccctgaaggtgcaagtgacagacatgaatgacaactccccagtcttc
tcgccttctttgtatgaggtagagtttgctgaggagaaccagccaggtgacaaggttctg
gatgtggtagccacagatgccgacagcgggactaatgcggaactgacatacagtatcact
ggtggatcagtccccgaggggctctttgaaattaaccctaacacaggagaagtgcgtgtc
atgagccagttggaccgtgaacaattaaatcactatcaatttctagtggcagcagctgat
aaaggtgtaccaagcttaagaggaactgccactgttgttgttaaggtgctcgacaggaac
gacaatgaccctaaatttatgcttaatggctacagcttttcagtccaagaaaacatgccg
ccccttagtcctgttggaatggtaacagtcaatgatcgcgacgagggcgagaatgctcgt
gttcaactttctgtagaaccagacaatggcaagtttatgattcaaaatggaacgtacact
atactttcgactatttcctttgacagggaaaaggagagcacctacagtttccgacttaaa
gccattgacggaggtgatccaccacgttcttcctacgttggcattaccattaatgttctt
gatgagaatgacaatgctccatacgtcaccaagccctcaaactcttcatacaagttcttg
gatccccgcaccagcccagaaacccacgtagaaagtgttgaggcagaggacattgacatc
ggtttaaattcagagctggatttcagtatagtagggggcaacccgcatggattgttccgc
atctcttcagaaggtgagattacgttggctaaagagttcacatccaaacacattggtctc
caccgtctggtagtaaaagttaaggacaaaggcatgccgccacgccatacgactgcactg
gttcacatctatgtcaatgagaccatcggcaatgtctcccacatcgaaggacttgttgga
cacagtctttatacaccacttgaaatggacattgcaggagatccagattattctcgagac
ccgcatagtaacattatttttgcagtcttgggtggcttttgtgtggtcattctaatcatt
gcagtggctatgatcatcaggcatgtcgtgctaaaggagaataaaagtggctaccaggca
ggcaagaaggagaccaaagacctctatgcccccaaaccaggacctaagagcaacaagaac
aagaagataaagaaaagcaaagctccaaagcctgccaacccatctgaagaggatgagggg
gggagtcttcagaaaggcctaaagttcaacctcatgaatgatagcgtcaacgatagccct
aggattcacctgccgctcaactacccccctgggagcccagacctagggagacactaccgg
tctaattctcctctgccatcaattcagctccaacctcagtcaccttctgcctcaaagaaa
catcaggcagtgcaggacctgccagcaaccaacacctttgtaggaaccggggacaacaac
tcaacaggctcagaccagtattcggattacagctacaaggccaactcttcaaaatatagc
accaaacagctcccgcatcgcagagtgaccttctccacagccaatcaggcgcaagatctg
caggatccctctcagcacagttactatgacagtggtctggaagagtcagagacacccagc
agtaagagttctttaggaccccgtatcgggcccctcgccctacctgaagaccactatgaa
cgcaccaccccagacggcagcatcggagagatggaacaccctgagaacgatctgaggcct
ctacctgacgtggccatgacgggaaaatgcacacacgagtgtacggaatacgggcactcg
gattcctgctggatgcctggacagccctcacccaaccacgccaagagtgcaaagagtggg
cccaagctctccaccttcgtgccttaccaggagagggaggatcaggagcacctgatggct
gacagcagctctaagcttcacagagaggagcggagcggaggcgggagcaacaaagtggcc
agcgttcgctttttgcctccctacactagtgcctattctacaggtggcgactccagcaag
gactgcccccgggaggagatccccctgagtcagacagccgattacgcccctgccactaca
ccctccagccaaggctccaaaagagaaatctacctgtga
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