Sinocyclocheilus rhinocerous: 107738948
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Entry
107738948 CDS
T04916
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107738948
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107738948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
107738948
NCBI-ProteinID:
XP_016406358
UniProt:
A0A673FND1
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MSAEISTIPSLHLYLDSFWSSSVESHSSDVNTTNAWVTAPTSSYNPTVSSSIRMDPAQSS
PTPDEFSELSSEFQAQLDLFLKLGFSQMQVRAAFLKLGLNADTNRVLGELIQAAGESEER
EEPTASPVLVSRGDASCKVRSTQNYSHNAPAVSSTSEELVEDEDALRPIVIDGSNVAMSH
GNKEVFSCLGIQLAVNFFLERGHVDITVFVPSWRKEQPRPDVPITDQHILRELERRKLLV
FTPSRRVAGKRVVCYDDRFIVKLAYESDGIIVSNDTYRDLQGERPEWKRFIEERLLMYSF
VNDKFMPPDDPLGRHGPTLDNFLRKTPRIPKKQPCPYGKKCTYGIKCKFNHPERTKQSQR
ALADELRDKAKISSTPHKPQPVSSQSPSLEEVMEQKLSLDAGSLKKSHASENVLVIKAAP
QPTQRKFPSKKEQRHSPTRLDSFPNGSQEHLDSGLGSYECHSPESSHCDRYCDHRKSKPS
NSGRHRYVLANSQPCSCCSYQSLSTSGAGQHHSMGLPSSPNPSYAQPQYHSYGGGSVYPP
VNMSQYSFPHSRGPPPQQGYWSDHYGGYPPASHNSMQPERGLGHWSPSNHNPQWSEREQV
RKKLLAIFNVRLVDRAMDRFPYLLDPQRLAAEILTLQSQDGAF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaaatcagcaccatcccctcgttacacttgtatttggattccttttggtca
tccagtgtagaatcccacagctctgacgtaaacaccaccaacgcatgggtaacagcaccc
acatcttcgtacaacccaaccgtttccagcagcattagaatggacccggcccagtccagc
ccgactccagatgaattctcagaactaagctctgagtttcaggcccagctcgacctgttc
ctcaagctggggttttcccaaatgcaggtccgtgccgctttcttgaaactcggcctcaac
gcagacaccaacagggttttgggtgagctgatacaggctgctggggagtcagaggagaga
gaggaaccgacagcctccccggtgctggtttcacgtggggatgcttcctgtaaggtccga
agcacccagaattacagtcataatgctccggcagtgtcaagcacttcagaagagctggta
gaggatgaggacgcactcagaccaatagttattgatgggtccaacgtagccatgagccac
gggaacaaagaagttttttcctgtctgggaattcagttggcagtgaacttcttcctggag
cggggtcacgttgacatcacggtgtttgtgccttcctggagaaaagaacagccgcgacct
gatgtacccattacagatcagcacattctgcgtgaattagagcggcggaagctcttggtg
ttcacaccatccagaagagtggcaggaaaacgagtggtttgctacgatgaccgttttatt
gtgaagctggcgtacgaatctgacggcattattgtatccaacgacacttaccgagatctg
caaggagaacgtcctgagtggaagcgttttatagaggagaggcttctgatgtattcgttc
gtcaatgacaagtttatgcctccggatgaccctttgggaagacatggacccaccctagac
aactttctcaggaagactccacgtatacctaagaaacagccctgtccttatggaaagaag
tgcacttatggaatcaagtgcaagttcaatcatccagagcgaaccaagcaatcccagcgt
gccctggccgatgagctccgagacaaagccaaaatttcatccacaccacacaaacctcaa
ccggtttccagtcagagtccgtctctggaggaagtaatggaacagaaactctccctggat
gctggatctctcaagaagagtcacgccagtgaaaatgtccttgtcattaaagcagccccc
cagccaactcaaagaaagtttccttcgaaaaaagaacaacggcattcgccaacaagacta
gattcctttcccaatggatctcaggagcatttggattctggcttgggttcctacgaatgc
cattctcctgaatcttcccattgtgatcgctactgcgaccacaggaagtccaaaccatcc
aacagtgggcggcatcgctacgttctggccaatagccaaccttgcagttgctgttcctac
caatccttaagcaccagtggagccggtcagcaccatagcatgggcctgcccagctcacca
aacccaagttatgctcaaccccagtatcactcctatggaggaggttcagtttacccacct
gttaacatgtcccagtattcatttccacacagcagagggcctcctccccagcagggctac
tggtctgaccattatggtggctatcctccagcgtcccacaattccatgcagccagagaga
ggacttggacactggtcgccttccaatcacaatcctcagtggtccgaacgggagcaagtg
aggaagaaattacttgcaattttcaatgtacgtttggtggacagagccatggacaggttc
ccgtatctcctggacccacaaagactggccgcagagattttgacccttcagtctcaggat
ggggctttttaa
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