Sinocyclocheilus rhinocerous: 107739046
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Entry
107739046 CDS
T04916
Symbol
xrcc5
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107739046 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107739046 (xrcc5)
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
107739046 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_C
Ku_N
Motif
Other DBs
NCBI-GeneID:
107739046
NCBI-ProteinID:
XP_016406500
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MQNIPVHVFAENKDEVGLVLFGTDSTKNRLAKDGQYENITVHRHLMMPDFELLEDIESKL
QPGGQQADCILPIHCHQFMGIQVVSCKVFAPRDDEHAAVVLSTLIXSLDSLKKAAIVRYA
YNHRSNPQVGAAFPCIKEKYECLLYVQLPFMEDLRQFTFPVLDNNKKFTPSESRLSAVDA
LIDSMMLVQKDDDGESVDVFKVNHIPNPQFQRLFQCLHHRGVNPDDPLPPAEPKRLKRDL
ERPQDVSTRCQAPLQDVKTKFPLKVVVXKKEQKTSADVFGSRVTYLHSWFSVLKFNLAEI
TEGNFTSVGSVNPVRDFCRQTVSFDQVCQQLTYRIEQLLGNRSPEYYMKSIACIQAFRDQ
SVSSVNAELFNSYMQSLKRSVADRNLQEFWDLLVKHVLLFSDALTLISKDEVDGSTISKQ
DANQFLVFEQKEKVQAAPAQDDTGDVDDLLDMM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatattcccgttcacgtgtttgctgagaataaggatgaggtgggtttggtgctg
tttggtaccgacagcactaagaaccgtctggccaaagacggccagtatgagaacatcacg
gttcaccgtcacctcatgatgcctgattttgagctgcttgaggacattgagagcaaactg
caacctggtggtcagcaagcggactgtatccttccaattcattgtcatcagtttatggga
atccaagttgtcagttgcaaagtttttgctcccagagatgatgagcatgcagcagtggtg
ctgtccactctgattnnctccctcgacagtctaaagaaggcagcgattgtgcgttatgct
tacaatcatcgcagcaaccctcaagtgggcgccgcttttccctgcataaaggagaaatat
gaatgtctgctgtacgtgcagctgccgtttatggaggatctccgacagttcactttccca
gtgctggacaacaacaagaagttcacgccttcagagtctcggctgtcagccgtcgacgcc
ctgatcgactccatgatgctggtgcaaaaggatgatgatggagagagcgtggatgtcttc
aaagtcaaccacattccaaacccacagttccagagacttttccaatgcttgcatcaccgc
ggtgtgaatcctgacgatcccctgccgcctgcagagcctaagaggctgaagagggatcta
gagcggccccaggacgtgtcgacccgctgccaggcccctctgcaggacgtcaagaccaag
ttccctctgaaagtggtggtgnaaaagaaggagcagaagacaagcgcagacgtgttcggc
agcagggtcacatatttgcacagctggttttctgttctcaagtttaacctggccgagatt
acggagggaaactttacatcggttggcagcgtcaatccagtcagagatttctgcagacag
accgtttctttcgatcaggtatgccagcagctgacctacaggattgagcagttgctcggc
aacaggagccccgagtactacatgaagagcatcgcctgtatccaggccttcagggatcag
tccgtatcgagcgtaaacgcagagctgttcaacagctacatgcagtccctgaagaggagc
gttgctgacaggaatcttcaggagttctgggatctgctcgtcaagcatgtgcttttgttt
tcagatgctctgacgctgataagcaaggatgaagtggacggaagcaccatttctaaacaa
gatgcaaaccagttcttggtgtttgagcagaaagagaaagtgcaagcggctccagcgcag
gacgacactggagatgtggacgatctgctggacatgatgtaa
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