Sinocyclocheilus rhinocerous: 107739090
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Entry
107739090 CDS
T04916
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107739090
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107739090
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LAMININ_IV_B
EGF_laminin
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
107739090
NCBI-ProteinID:
XP_016406574
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MLLQLAALLTLGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLQKPEPF
CIVSHLQEEKKCFVCDSRGTSDESMHHITSHRIENVVTTFGPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFRTFRPAAMVIERSADFGKTWQVYRYFAYDCEASFPIVSQGPMT
KVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYSVYDMVVRGNCFCYGHASECAPIDGAGEVVDGMSVCWCNCNHH
SDSCHFDMAVYKASGNVSGGVCDDCKHNTMGHTCEQCKPFFYQHPEKDIRDPSICELCDV
SLVQLLLCSSVLVQIWEQKHLGFEVVRYHGAKRRPSSNHMSKVSHSSFVVVTEVFQFELF
DHKAEMRPVGSLNGGVCDPLTDVSLGLIAGQCRCKPNVEGERCDQCKQGHYGLSDDPLGC
QPCTCNALGTVPGGSPCDTDSGNCYCKRLVTGRNCDQCLPQHWGLSNDMDGCRPCDCDHG
GAINNNCSPETGQCQCRQHMFGRRCDQVESGFYFIALDHYTYEAEDAKFGPGVTVVPRPQ
PQDRSPTWTGIGFVNVPEGAYLEFSIDNIPYSMEYDIIIRYEPQLPEQWEEVLMTVIRPR
VITANSRCANTMPDDDNQVVSLHPGSRYVVLSRPVCFEEGLNYTVRLSLSRYSALSDVQS
PYTLIDSIVLMPHCKNLDIFSGSGSEGGDLVTNSAWETFQRYRCLENSQAVVKTPMTDIC
RNYIFSMSALLHEGVKACQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDKCAPATFLFGP
QGCRPCDCSPEGSVHSFCHEASGQCARCEECAPGYYGNPHEVGGECRPCQCNNNIDMMDP
ESCDARTGACLKCLYHTEGEGCNRCKLGYYGNALTQSCRKCVCNHMGTVKEMCPSPGNCN
CDLNSGQCQCLPNVVGQHCDQCAPDTWNMGSGKGCEACDCDLNHSFSSSCNEIMGQCSCK
PGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQCNKATGHCVCVEGVSGPRCDTCA
RGYTGEFPHCERCHQCFAEWDVIVGDLTNQTHRLVQKVNTIKATGITGPYQATINNVESN
ANSIHNILAQNPATQPLTEIQGLLEQATALMAKMNTNLNLTEETLSEISSDNNSTDTKLN
SLKEEAQKLEQTVKDLQEQVEFVKNSDIRGARASMTRYYEQSQMAEIRANASTIDPYNLV
NQSATLRTETEDLMNQTKEEFIQRQDEFSKKLDNLAGQLENLDLSELSEKKQIRKEATDM
KDTAEMVKQALQQAEHAQSSVTEALKQATADIKGTQDLLVSVESETSDSELKLSNATRKL
LKLESDVALLKEKALNTSTSANSTEKEADSINALADQLKKDLDSELKDKYSSVEELITQK
AEGVAEAKKRAEKLQQEAKNLLLQASDKLQLLKNLEKSYDENQKLLEDKANELVDLEKAV
KELLQEISHKVTVYSTCLF
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgctcttacagcttgcagcccttttaactttaggggcatgggctctggcagatgtacct
gagctgggagatgtttgcacagaggggagctgttatcctgccacaggagatcttctcatt
ggaagagcgcaccaactctcggccacctccacatgcggactccagaaacctgagcccttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgcgattccaggggaacc
tccgatgagagcatgcaccacataaccagccacagaattgaaaatgttgtgactacgttt
ggcccgaaccgcctcaagacttggtggcaatcggaaaatggcctggagaacgtcacaatc
cagttgaaccttgaggcagagttccacttcacccacctcatcatgacctttagaacgttc
agacctgctgccatggtgatcgaacgttctgcagacttcgggaagacttggcaagtgtat
cgttacttcgcctatgactgtgaggcctccttccccatcgtctctcaaggacccatgacc
aaagtggatgatgttatctgcgattctcgctactccgacattgaaccctcaacagagggt
gaggtcatctttagggttttggatccagccttcaggattgatgatccttacagccccaga
atccaaaacatgttaaagatcactaatctgagggtgaagttcactaagctgcacactctt
ggggacaatcttctggactcacgtatagagatcaaggagaagtactactactcagtctac
gacatggtggtcagaggaaactgtttttgctatggtcacgcatctgaatgcgcccccatc
gatggagctggagaggtcgtggatggcatgtctgtctgctggtgtaactgcaatcatcac
tctgattcctgtcatttcgacatggccgtgtataaggcgtcgggtaacgtgagcggcggt
gtgtgcgatgactgcaagcacaacaccatgggtcacacgtgtgaacagtgcaagccgttc
ttctaccaacatccagagaaagacatccgcgatcccagcatctgcgaactttgtgacgtg
agtctggttcagctgttgctttgttcatctgtgctcgtgcagatttgggagcagaaacac
ctgggctttgaagtagtccgttaccacggggcaaagcgccgcccttcctcaaaccacatg
tctaaggtttcacattcctcttttgttgtggtgactgaggtttttcagtttgaactcttt
gaccacaaagcagaaatgcggcctgttggctctctcaacggtggagtgtgtgatccgctc
acagacgtgtctctcgggctgatcgcgggtcagtgtcgctgtaagcctaatgtggagggt
gagcgctgtgaccagtgcaaacagggccattacggactcagcgacgaccctctgggatgc
cagccatgcacatgcaatgctttggggacggttccaggtggaagcccatgcgatacagac
tcaggaaactgctactgtaaacgtctggttaccggaaggaattgtgaccagtgtctgcct
cagcactggggtctcagtaacgacatggatggctgcagaccatgtgactgtgatcatggt
ggcgcaatcaacaacaattgctctcctgaaacgggtcagtgtcagtgtcgccagcacatg
tttggcaggcgctgcgaccaagtagaatctggtttttacttcattgctctggaccactac
acttatgaagcagaggatgccaagtttggacctggtgtgacggttgtcccgagaccccag
cctcaggacagatcccctacttggactggcattggttttgtaaacgttcctgaaggtgcc
tatcttgagttcagcatcgacaacatcccctactctatggagtatgacattatcatccga
tatgaacctcagctgccagagcagtgggaagaagtgttgatgactgtcatcaggcctcgt
gtcattaccgccaacagccgctgtgcaaacacaatgcccgacgatgacaaccaggtggtg
tctctgcatcccggatccaggtatgtggtgctgtctaggcctgtgtgttttgaagaaggc
ttgaactacaccgtgcgtttgagtctgtctcgctactcggctctcagtgatgtgcagtcg
ccgtacacgctcattgactcgatcgtcctcatgccacactgcaaaaacctggatattttc
tctggctctgggtcagagggtggggacttggtgactaacagcgcctgggaaaccttccag
cgctaccgctgtttggagaacagccaagcggtggtgaaaacccccatgactgatatctgc
agaaattacatcttcagcatgtcggctcttctgcacgagggagttaaagcctgtcagtgt
gacccgcaggggtctcttagcacggtttgtgacccgagcggtggccagtgccagtgtcgt
cccaacgtggttggcaggaactgcgacaaatgcgccccagcgaccttcctctttggtccg
caaggctgcaggccatgtgattgcagtcctgaggggtccgtccactctttctgccatgag
gccagcggtcagtgtgccaggtgtgaagaatgcgcccctggttattacggaaacccacac
gaggtgggtggagaatgccggccctgtcagtgcaacaacaacattgacatgatggacccg
gagtcctgtgacgcccgtacgggcgcttgtctcaaatgcctgtaccacacagaaggcgag
ggctgcaaccgctgcaagctcggttattacggcaatgcactgacacagagctgcaggaag
tgtgtgtgtaatcatatgggcactgttaaagagatgtgcccctctccgggtaactgcaac
tgtgacttaaacagcggccagtgtcagtgccttcccaatgtggtgggccagcactgcgat
cagtgcgcaccggacacgtggaatatgggcagcggtaaaggctgtgaggcctgcgactgc
gacctcaaccattcattcagctcctcctgcaatgagattatgggccagtgctcttgtaaa
cctgggtttggcggcagaacctgtcgagagtgtagagagctgttctggggaaaccctgag
gtcaaatgccacgcatgtgattgtgacccaagaggcatcgcagagcagcagtgcaacaag
gccacaggtcactgtgtttgcgtggagggcgtttccgggccccgatgtgacacgtgcgct
cgaggctacacaggcgagttcccacattgtgagcgctgccaccagtgctttgccgaatgg
gatgtaattgtgggcgacctcaccaaccagacccatagactggtccagaaggtcaatacc
atcaaagccactggcattacaggaccctaccaggccaccatcaataacgtagaaagcaac
gccaactcaatccacaacatcttggctcagaatccagccactcagcctttaacagagatc
cagggacttctcgaacaagcaactgccttaatggctaaaatgaacaccaaccttaacctg
acagaggagaccttgtccgagatctcatccgacaacaacagcacggacaccaaactgaac
tccctcaaagaagaagctcagaaactggaacagacagtgaaagaccttcaggaacaggtg
gagtttgtgaagaattcagacattcgaggggccagagccagcatgactcgatactatgag
cagtcccagatggcagagatccgtgcgaatgcctccaccattgacccatacaacctggtc
aatcaatctgctaccctgcggacagaaacggaggacttgatgaaccagaccaaagaagag
ttcattcaaaggcaggatgagttttcgaagaaactggacaacctcgctggacagctggag
aatctggacctttctgagcttagcgagaagaagcaaatcaggaaggaggcgaccgatatg
aaagacacagctgagatggtgaagcaggccttgcagcaggctgagcatgcccagagttca
gtaaccgaggcactgaaacaggccactgctgacatcaagggaacgcaagacttactggtc
tcggtggagtcagagacgtccgactccgagctaaaactgagtaacgccacccgaaagctc
ctgaagttggaaagcgatgtagctctgctaaaagaaaaggctctcaacacctccaccagt
gccaacagcacagagaaagaggctgatagcatcaatgcactggctgaccagctcaaaaag
gatttggattcagagttgaaagacaagtacagtagtgttgaggagctgatcacacagaag
gctgaaggagtggcagaggccaagaaaagagcagagaagctccaacaggaagccaaaaat
ctgctgctacaggccagcgacaaacttcagcttctgaaaaatcttgagaagagctatgat
gaaaatcagaagctgctggaggacaaggccaatgagctggtggatctggagaaggctgtg
aaagaactgcttcaggagatcagtcacaaagtcaccgtctacagcacctgtctgttttaa
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integrated database retrieval system