Sinocyclocheilus rhinocerous: 107739119
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Entry
107739119 CDS
T04916
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107739119
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107739119
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
MTR4-like_stalk
LHD_TRPY1
TALPID3
RIN1
Motif
Other DBs
NCBI-GeneID:
107739119
NCBI-ProteinID:
XP_016406614
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPRPHAVGCECTLCNAKNKKD
SLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELAKQC
KMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLEERMNLSRLKLAIKYNQKEFVAQS
NCQQFLNTVWFGEMASYRRKHTCLKILSVLSVALMWPLLSICYLLGPRSRVGQVIHTPFI
KFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPPLELIDYLLILWIIGMVWSDVKRLWYE
GLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKFKNVEEEPFVERKNWDAFHPLLVAEG
LFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFLGLFLLVLISFTIGLTQLYG
KDNYLSSSKNITKDCEGIFCREQSNDTFHTFMGTCYALFWYIFSLAHVALFVTRISYTEE
LRSFVGALIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHEDKEWKFARAKLWLSYFDDKC
TLPPPFNILPSPKTVCYLVISLSKWICSHTSTGKVKRQNSLKEWRNLKQKRDENYQKIMC
CLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcattcaaaacccagagtattccaccaccatggatgttgctccagtcattctt
gctgcccaccggaacaattatgagattttgaccatgctattaaagcaagacatctctctg
ccccgaccccatgctgtagggtgcgagtgcaccctctgtaatgccaagaacaagaaggac
agtcttcgtcactcaaggttccgtctagatatctatcggtgccttgctagcccatccttg
atcatgcttacggaagaagaccccattctgagagcattcgagctcagtgctgatctgaaa
gagctgagcctggtggaagtggagtttcggaatgattatgaagaacttgccaagcaatgc
aagatgttcgccaaggacctgctggctcaggcccgcaactctcgcgagctggaggtcata
ctgaaccacacgtccagtgaggaccatgtagacaagagaggcctactagaggaacgcatg
aacctcagtcgcctcaaactggccataaaatacaaccaaaaggagttcgttgcccagtcc
aactgtcagcagttcctgaacacggtgtggtttggcgagatggcgagctaccgccgtaag
cacacatgcctgaagatcctgtctgttttgagcgtggcgctgatgtggcctctgctgtcc
atctgttacctgctgggaccccgttctcgagtgggccaggtcatccacacaccttttatc
aagttcatcatccatagtgcctcctacttcaccttcctgctccttctaaacctttactca
ctggtctacaacgaggataagaagaacaccatgggtccccctttggagttgatagactac
cttctcattctctggattataggcatggtgtggtctgatgtgaagcgtctgtggtatgag
ggattggaggatttcctggaagagtcacggaaccagctgagttttgtcatgaactctctt
tatttggccacttttgccctaaaagtggtggctcacagcaagtttaagaacgttgaggaa
gagccatttgtagagaggaaaaactgggatgcattccatcccctcttggttgctgaaggc
ctttttgcgttcgccaatgttctgagctatctccgtctgttcttcatgtacaccaccagc
tctatcttggggcctttacagatctccatgggccagatgctacaagagtttgggaagttt
cttggcttattcttgcttgtactcatctctttcaccattggcctgacacaactctatgga
aaagacaattacctatccagctccaaaaatataaccaaggactgcgagggcatcttctgt
cgagagcagagcaacgacacctttcacacgtttatggggacatgttacgccctcttctgg
tacattttttccctggcacatgtggctctgtttgttacaaggattagctacacagaggag
ctgcggtcgtttgttggtgctcttatcattggtacctacaacattgttgtggtcatcgtt
ctcaccaaactcctggtggccatgctgcataagagcttcagacagattgctaaccatgaa
gataaggagtggaagtttgcccgggccaagctgtggctcagctacttcgatgacaagtgc
acactgcctccacctttcaacatcctaccctctcccaagaccgtgtgttacttggtcatc
agcttgagcaaatggatctgttcccacacctccacaggcaaggtcaagagacagaatagc
ctcaaggaatggagaaacctgaagcagaaaagagatgagaactatcagaagattatgtgc
tgtcttgttcaccgttacctgacctctacaaggcagaagatgcagagcacggaccaggcc
acggtagagaacctcaatgatctgcggcaagacctctccaagttccgcaatgaaatgagg
gaccttttgggcttccgcacctccaaatatgccatgttttaccccagaagctaa
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