Sinocyclocheilus rhinocerous: 107739281
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Entry
107739281 CDS
T04916
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107739281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107739281
03036 Chromosome and associated proteins [BR:
srx03036
]
107739281
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107739281
Coactivators
SAGA/TFTC/STAGA complex
107739281
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107739281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Beta-Casp
tRNA-synt_1c
Mit_KHE1
Motif
Other DBs
NCBI-GeneID:
107739281
NCBI-ProteinID:
XP_016406831
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MVTTLIGTSTVQTLNGGNAMDPHTESGTPVSSGPSSSSDDASTSVPVVNNGPGVAKGLGN
ITVAPSPNTVIQSSYGNPPAAASAASSAGPSVTVVRPSMQTAGTGLTINGSNNNNTVSAT
VANVATPGITTTSTSTTTSTTTTTPLLINQTPASVPASKSEATKTIIQPAGTMTLGPVVA
KGAVLQGVSRTAAPATVAAAAGSSPAIRAIAPQVLAPRLPQSTPGQNIQNIQLPPGMVLV
RSDSGQLLMIPQQMLAQMQAQSQAARPAAPTSTTPGQITSAQVPGTPLMARQVTPTNIIK
QGSPTASSTATTTLQRPPVQQASSVGAVLSVQAGTAQRTVTAATGTTVSSATETMENVKK
CRNFLSTLIKLATSGKQSSETVANVKELVKNLLEGTIEAEEFTSRLYKELNSSPQPYLVP
FLKRSLPALRQLTPDSTAFIQQSQALQAPAVVLTSTNTAGATATAPRTLIQPALSNSSQT
ASLILQPPQQGAIVKPPQVTLTTTPMVTLRGQPHGHIVVGQPQVQLKQIQTVAVKQGVVS
STKLAPGSMSVALAQKNKTKDGAGGTFRDDDDINDVASMAGVNLSEESARILATNSELVG
AVTRSCKDEPFLTASMLQHKILEIGQRFGVTELGPEVVNIISHSTQQRLQNLLEKVSLIA
QQKNMTYKEDSRYEQVEDVRSQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQ
LRLKQKAKEMQQQELAQIRQREANLAAIGPRKKRKLNSPSLGSDAEGSGLCVSASGGLNA
GASRQYTRQRITRVNLRDLLFCLENERSTSHSQLLYRALLK
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgatcgggacgtccacagtgcaaactttgaacggaggcaatgcaatg
gatccgcacactgaaagcggcactccagtgtccagtggcccatcatcatcatcagacgac
gcttcaacttctgtcccagttgttaataacgggcccggggtggcgaaaggactcggaaac
atcactgtcgccccaagcccaaacacagtgatacagtcttcatacgggaatcctccagcg
gcagcatccgcggcatccagtgcaggaccctcggtgacagttgtcaggccatctatgcaa
actgctggaacaggtttaactattaacgggagtaataataataacaccgtttcggcgact
gtagccaatgtagcgaccccgggaataacaactacttctacttctactactacttctact
actacaacgacccctcttttgataaaccagactcctgcttctgtcccagcgagcaagtcc
gaggctactaaaactatcatccagcccgccggcaccatgactctcggccctgtagtggcc
aagggggctgttttgcagggggtttcgagaactgcagctccggcaactgttgcagcagca
gcgggatcgagccctgccatcagggccattgcgccacaggtgttagcgccccgactccct
cagagcaccccgggccagaacatccagaacatccagctacctccaggtatggtgttggtg
cgtagtgacagtggtcagttactgatgatcccacagcagatgttggcacaaatgcaggcc
cagtctcaggccgcccgccctgctgcccccaccagcaccacccctgggcagatcacctct
gcacaggtgcctggaactcctctaatggcccgacaggtgactcctaccaacatcataaag
cagggctctcctacagccagcagcacggccactaccacactccagagaccacctgtacag
caggcctcctctgtgggtgcagtgttgtcagtgcaggcaggaaccgcccagaggactgtg
actgctgccacggggaccactgtctcctcggcaacggagacaatggagaatgtaaagaaa
tgtaggaacttcttgtccacgctgataaagctggccactagcggtaagcagtcatcagag
actgtcgccaacgttaaagagctggtcaagaacctgctggaagggacgattgaagcagag
gagttcaccagcaggctctacaaagagctcaactcctctcctcagccttatctagtgcct
ttccttaagaggagtcttccagctctgagacagctcactcctgactccacggccttcatc
cagcagagccaggccctccaggcgcccgctgtggtgctaaccagcaccaataccgctggt
gccaccgccacagcccctcgcacgctcatccaacctgccctcagcaactccagccagact
gcctctctgatattgcagcctccacagcagggggcaatagtgaagccccctcaggttacc
ctgacaaccactcccatggtgacgcttcggggtcaaccccacggccacatagtggtgggt
cagcctcaggtgcagctcaaacagatccagacagtcgctgtgaagcagggtgttgtgagt
agcactaaactggctccgggctccatgtctgtagcgttagctcagaagaataaaacaaag
gatggtgcgggaggaactttcagggatgatgacgacattaatgatgtggcctcaatggca
ggcgttaatctttcggaggagagcgctcgtatcctggccaccaactcggagctggttggc
gcagtcacgcggtcttgtaaggatgaacctttcctcaccgccagcatgctacagcacaag
atactagagataggccaaaggtttggagtgacagagctgggtccagaggtcgtgaacatc
atctctcactccactcaacagagactgcaaaaccttctagagaaggtctcattgatcgcc
cagcaaaagaacatgacttacaaggaggatagtcggtacgagcaggtggaggatgttcgc
tctcagctgaagttctttgagcaacttgaccagttggagaaacaaaagaaagaagaacag
gagagagaaattttaatgaaagcagcaaagtcacgctcgcgacaagaggaccccgagcag
ctgcggctgaaacagaaggccaaagagatgcagcagcaggaattggctcagattcgacag
agagaggccaacttggcggctattggacctagaaagaaaagaaaactgaattctccttcg
cttgggagtgacgcagagggctcaggtttgtgcgtgagtgcatccgggggcttaaatgca
ggagcgtcgaggcagtacactcgccagcgcatcacgcgtgtaaacctcagggatctgctc
ttctgtctagagaacgagagaagcaccagccactcacaactgctctaccgagcccttctc
aaatag
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integrated database retrieval system
