Sinocyclocheilus rhinocerous: 107739381
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Entry
107739381 CDS
T04916
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04217
Necroptosis
srx04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
107739381
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107739381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107739381
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
107739381
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
107739381
Multi subunit type E3
LUBAC complex
107739381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
zf-RING_2
IBR
zf-RING_5
ubiquitin
IBR_1
Motif
Other DBs
NCBI-GeneID:
107739381
NCBI-ProteinID:
XP_016406968
UniProt:
A0A673LXR5
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSLSSGGWTHTPPPAQSSSSHVGHEASRSACSTVLMSVKVSVCHSGIRPLCLPGAGDDSL
RLQLSMDPGKAGEFRLALRDISGTAAGRSVSVAEFDLKTVRYEVKSPQCHELSLATPPHD
RITFNFRCEQEAQEWATVVMSSLREAHRVAICSSTEERQLPPQPLDTQSSAPMPRTEEIC
AELVSAIEAGDVRAASVCASSLAKQKAALSIQPSKRNYTDTEISLAVVVEDASSSCCVTV
KVVPHSTIGALKQQVFTDYGFHPRVQRWVIGQSLCSDHRSLASYGVQQDGDTAFLYLISA
RQARLSRGLYQQDQESALLMPALVSTTNQPHQEAVTNGPALNTASRPYSTLPTRLHNSHN
TLSDSAGGTERLGLGEIRDLINLELPQLNEALAPNRTSTQLGWACPTCTYINKPTRPGCE
MCSADRPEGYTVPGNYRPDALELRRIQQEKKAIRQYQQAREAERRENFARLVRIDGQDLV
PNPERVECRICYVELEPGEGVLLRECLHCFCKECLRSVILMSEDPQVACPYRDEAYACDC
IVQEREIRALVSVDDYERWLQRGLSVAESRCEGSYHCATADCPGWCVYEDTVNTFHCPVC
RKHNCLLCKAIHEGMNCKQYQDDLTARAINDSAARRTRDLLKTLVNSGEAMHCPQCGIIV
QKKEGCDWLRCTVCHTEICWVTRGPRWGPKGPGDTSGGCRCNVNKQRCHPKCQNCH
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgagctcaggcgggtggactcacacacctccgccggcccagtcttcatcgtct
catgtcggccatgaggcctcgcgatcggcctgcagcactgttttgatgtcggtgaaggtg
tcagtatgccactcaggtatacgaccgctttgtctcccgggggccggagacgattctctc
cgcctacagctgagcatggacccggggaaggcaggggaattccgcctcgcgttacgggac
atcagcggaacagcggctggacgcagcgtgtccgttgctgagttcgacctcaagactgtt
cgctatgaagtcaagtccccacagtgccatgaactgagtttggcaacaccaccacacgat
cgtatcactttcaacttccgctgtgagcaggaagcacaggagtgggccactgtggtgatg
tcatcactccgtgaggcacacagagtggcgatttgttcctccactgaagaaagacagcta
cctcctcagcctctggatacgcagagcagtgcacccatgccacgcacagaggagatatgt
gcggagctggttagcgcaatagaggcaggtgatgttcgggcggcatctgtctgtgcatca
tctttagccaaacagaaagctgctctgagcattcagccatctaaacgaaattacacagac
actgaaattagcctggctgtggtagtagaagatgcatcctcttcctgttgtgtcacagtg
aaagtcgtccctcactccacaattggtgctctcaaacagcaggtcttcacagactatggt
tttcatccgcgcgtgcaacgctgggtcattggccagtctttgtgctctgatcaccgctct
ctggcttcttacggagttcagcaagatggcgacactgcgttcctttatctcatttctgcc
cgtcaggcccgtctcagtcgcgggctttaccaacaagatcaggaaagtgctttgctcatg
ccggctttggtgtcaacgactaatcagccccaccaagaagcagttaccaatgggccagca
ctgaacacagcctcaagaccatacagcaccctgcctacaagacttcataacagccataat
accctgagtgacagtgcgggaggtacagagaggttaggtttgggtgaaattcgtgacctc
atcaaccttgagctgccgcagttgaatgaagccctggcgcccaacagaacaagcacacag
ctgggatgggcctgcccaacctgtacatatattaataaaccgacacgtcccggctgtgaa
atgtgtagcgcagacagacctgaaggctacactgttcccggtaactacagaccagatgct
ctggagctaagacgcattcaacaggaaaaaaaagcaataaggcagtaccaacaggccaga
gaagcagaacgcagagagaactttgcacgtctggtgcggatagacggacaggatctggtt
cctaacccagagagagtggagtgcaggatctgctatgtggagcttgagcctggcgaggga
gtcctgctccgagagtgtctccactgcttctgcaaagagtgtctgcgctctgtgattctg
atgtcggaggatcctcaggtggcatgtccatacagagacgaggcctacgcctgcgactgc
atcgtgcaggaaagagaaatcagagctctggtgtcagtagacgattatgagcgctggttg
cagaggggtctgtctgttgcagagtctcgatgtgagggcagttatcactgtgctacagca
gactgtcccggctggtgtgtttatgaagatactgtcaacactttccactgcccagtgtgc
agaaaacacaactgcctgctctgcaaggccattcatgaagggatgaattgtaagcagtat
caggatgatctaacagctcgcgccatcaatgactctgcagctcgaagaaccagagacctg
ctgaagactcttgttaattctggagaggcgatgcattgccctcagtgcggcatcattgtg
cagaagaaggagggctgtgactggcttcgctgtactgtctgccacactgagatctgctgg
gtcaccagaggaccacgctgggggcccaaaggtcctggagacacaagtggaggctgccgc
tgcaatgtcaacaaacagagatgccatccaaaatgccagaactgtcactaa
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