Sinocyclocheilus rhinocerous: 107739705
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Entry
107739705 CDS
T04916
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04010
MAPK signaling pathway
srx04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107739705
04020 Calcium signaling pathway
107739705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107739705
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107739705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
107739705
NCBI-ProteinID:
XP_016407389
LinkDB
All DBs
Position
Unknown
AA seq
2343 aa
AA seq
DB search
MARFGDDLPTRYGGPASAGRGGARAGGPSGGQRMYKQSMAQRARTMALYNPKQTKQNCFT
VNRSLFIFSEDNVFRKYAKRITEWPPFEYLILTTIIANCIVLALEQHLPAMDKTPMSERL
DDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILTTLGSQFDLRT
LRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVEFYMGKFH
FTCFKVDTGEKVGDYPCGAERPSRVCPNGTICREYWTGPNFGITNFDNILFAILTVFQCI
TMEGWTDVLYHANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQE
FLKLRRQQQIERELTGYLEWICKAEEVLLAEEDQNAEEKSPLDGAWYRKKQNNPVLKRTK
SRKGRNDLISAEEGEEHFTDISSVAPPGSPFARASLKSSKNDSSSYFRRKEKRVRFFIRR
MVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTKALYLAEFVFLGLFLTEMTLKMYGLG
PRNYFHSSFNCFDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDSFPAAIMTVF
QILTGEDWNAVMYHGIESQGGVRGGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAAKKSMALQKAMEVKEVSPMSAANISIAAFVKQNRDAISRRSSVCSVHSP
KEQQRSLQKMSIWEQRTNQLRRHNLRNSSEALYNELEPEERLRMSSALHLRPDMKAHHDR
PLVVEHRDDTVDNSRTDRDGDTPDCQPSSGHPRKHHRCRGENGDAGEGRHHRHHSRNREH
QGGLEHSSNQDGGHTNHHMAGSPEEVIGMEEREHRHHHSRRSREVNGNGNGTIGNGGRGE
GRIRGHREGEGENGERRRHRPRVKAQSTLDGEECRENGGKHGGRPTGTDSLATSPLQSPT
EEKPEDKDNLKNSTRVGPTGVNIPVTITAPPGETTVIPMNNIDGDSLLLNEEKKDLDELN
QNAPKHILPYSSMFVFGPTNPVRRLCHYVVNLRYFEMCILTVITMSSIALAAEDPVQANA
PRNDVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDPWNILDFIVVTGALVAFACS
SFMGSQQSLTRGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNIL
IVYMLFMFIFAVIAVQLFKGKFFHCTDESKALEKDCRGQFLEFGSDGLAMTLPREWKKYD
FHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATYEDQGPSSGYRMETSIFYVVYFIVFPF
FFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPQDKQSYQYKIW
KFVVSTPFEYSILTMIAINTVVLMMKFHDAPNPYEDMLKWLNIIFTALFTLECILKVIAF
GPLNYLKEAWNIFDFVTVLGSITDILVTEIETDKRINLSFLRLFRAARLIKLLRQGYTIR
ILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIMLSEESAINIHNNFQTFFQALM
LLFRSATGETWHEIMLSCLSERPCDRDSGYTGKECGSDFAYFYFVSFIFLCSFLMLNLFV
AVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRMSYLEMYEMLRHMSPPLGLGK
KCPPRIAYKRLVRMNMPIAEDSTVHFTSTLMALIRTALEIKLASGVLAQRLCDAELRKEI
NKIWTNLSSKTVDLLVTPHKHNELTVGKVYAALMIFDYYKQNRAKRLQQQQAAPGTQSKV
GVLFRPMLPLTHLHGQEPLVLKALPSSQLDTTPQPDAPPTSFHLTNGDAVQSQSSAMKTS
PSGDIPQEVTQEANRRPVQRGQSEDVPNTYRSQELVEMTDMENDSDVCGYPVLEGHSRAA
SMPRLNAGFQRSHLRHTAGTYLAPIADVSPIRRSVSSLTPQRGVREVNLSDYDLERPKMA
PGQTLTQERERDRAHHHHHHHHRCQRRRDKKHKSLDRVISEEQPPPAADPNTESLPRERA
GERDRGRSHERKHHSSSAVERKQRYYSCDRYGSHEQGHSVSAGPSRSTSPGEPHDPNRLK
QGVSTAKGTSVVYTSGTSTPCRGRRQLPQTPLTPRPAVAYKTANSSPVQLNTAQSTGPCP
TRLSRGLSEHDALLSGSTHRQSPVPVTRIGSDPNLGPLQQDSHLSESDDFHDALSTYGTG
RSPRTAASIAHTSSGAAPTSTLLSRSQSGVPNGYHYSLGVNAAPGSSGRASGSYQETERD
DWC
NT seq
7032 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttggagacgatctgcccacccgctatggaggtccagcgagcgccgggaga
gggggagcacgggcaggaggtccctcgggcggtcaaagaatgtacaaacagtcgatggct
cagagagccaggacaatggctttatataatcctaaacaaaccaaacagaactgcttcact
gtcaaccgctctttgttcatcttcagtgaggacaatgtcttcaggaaatacgccaaaaga
attaccgaatggcctccatttgagtacctgatcctcactaccatcatcgccaactgcatc
gtactggccctcgaacagcatctccctgccatggacaagacccccatgtctgaacgcctg
gacgacacagagccctactttatcggaatattctgtttcgaggccggcattaagatcatc
gccttgggctttgtgtttcacaaaggctcttacctacgcaacggctggaacgtaatggac
tttgtggtcgttctgacagggattttaaccacactgggttcgcagtttgacttaagaacg
ttgcgggccgtcagagtgctgagacccctcaaactggtgtctggaatcccaagtcttcaa
gtagtattaaagtccattatgaaggccatggttccacttcttcagattggactgctgctc
ttctttgccattgttatgtttgccatcatcggcgtcgagttctacatgggcaaattccac
ttcacctgctttaaagtggatacaggagaaaaagttggtgattacccatgtggagcagaa
cgtccttcaagagtgtgtcccaatggaacaatatgtagggagtactggacaggacccaac
ttcggcatcaccaatttcgataacatcctctttgccatcctcacagtcttccagtgcatc
accatggaaggatggaccgatgtactataccatgccaatgatgcctcgggaaacacctgg
aactggctgtacttcatccctctcatcatcattggctcctttttcatgcttaacctcgtc
ctgggtgtcttatcaggagagtttgccaaagaacgagaacgagttgagaaaaggcaggag
ttcttgaagctccgcagacagcagcagattgagagagagctcaccggctatttggaatgg
atatgcaaagcagaggaagtgttgctggcggaggaggatcagaatgctgaggagaaatcc
cctctggatggtgcgtggtacaggaagaaacagaacaacccagttctgaaaagaacgaag
agcagaaagggtagaaatgacctcatcagtgctgaagagggagaggaacatttcaccgac
atctcctctgttgcaccacctggatcaccttttgcccgagctagtttgaaaagcagtaag
aatgatagctcttcatacttccgtcgaaaggaaaagagggtacgctttttcatccggcgg
atggtgaaggcacaaagtttctactggatcgttttgtgtttggtgggactgaacacgttg
tgtgtggccattgtccattacgaccagcctgagtggctcaccaaggccctgtacctggca
gagtttgttttcctgggtctgtttctgacagagatgactctaaagatgtatggcctgggg
cccagaaactactttcactcctcattcaactgttttgactttggggtaattgtgggaagt
atatttgaagtggtgtgggcagcgatccagcctggcgcgtcttttgggatcagtgttctg
agagccctgcgcctgctccgtatctttaaagttaccaagtattggaactctctgcggaat
cttgtggtttcactgttgaactccatgaagtccatcatcagcttgctcttcctcctcttc
ctcttcattgtggtgtttgccctgctgggcatgcaactcttcgggggccagtttaatttt
gaagatgaaactcccactacaaactttgacagcttccctgcagccataatgacagtcttc
cagattttgacaggagaggattggaatgcagtgatgtatcatgggatagagtcccagggt
ggtgtccggggtggaatgttctcctcggtctacttcattgttcttacactgtttggaaac
tacacacttctcaatgtattcttggccatcgctgtggataaccttgccaatgcacaggag
ctaacaaaggatgaagaggaacaagaggaggcagcgaagaaaagcatggctcttcagaag
gctatggaggtgaaggaggtcagcccaatgtctgctgccaacatctcaatagcagctttt
gtaaagcaaaatcgagatgcaatctctcgcaggtcttcagtctgcagcgttcactcacct
aaagagcagcagaggtcactgcagaaaatgtccatatgggagcagcgcaccaaccagctg
cgcagacacaacctgcgcaacagcagcgaggccctttacaacgaactagagcccgaagag
cgtctgcgcatgtcttcggcgctccatctgcggcccgacatgaaggcccaccacgatcgg
ccgctggtagtggagcaccgagacgatactgtggacaattctaggactgacagagatgga
gacactccagactgtcagccgtcctccggccacccaaggaagcaccatcgatgtcgagga
gagaacggagatgcaggagaggggaggcaccatagacaccacagccgaaacagagagcac
cagggcggcctggagcacagcagcaatcaggatggaggacacactaaccaccacatggct
ggttctcctgaggaggtcatagggatggaggagagagagcacagacaccaccattctcgc
cgatccagagaggtcaacgggaatggcaacggcacgatcggtaatggaggcagaggcgag
ggtaggatacgaggtcacagagagggcgaaggagagaatggagagaggagaagacaccgg
ccacgtgttaaagcccagtccacactggatggagaagaatgcagggagaacggtggaaaa
cacgggggcagaccaacaggaacagacagcctagccaccagccctctccagtctccaact
gaagagaagccagaagacaaagataatctaaaaaacagcaccagagtgggcccaactgga
gtcaacatccctgttaccataactgccccaccaggagagactacagtcattcccatgaac
aacattgatggtgacagtctactgctgaacgaggaaaagaaggatcttgatgagctaaat
cagaatgcgcccaaacacattctgccatacagctccatgtttgtgttcggtccaactaac
ccagtgagacggctgtgtcattatgtggtgaacctacggtattttgagatgtgtatcctc
acagtcatcaccatgagcagcatcgccctcgctgctgaagaccctgtgcaggccaatgcc
ccgcgcaatgatgtgctgaaatacctagattacgtcttcactggtgtgttcacgtttgag
atggttataaagatgatcgatctcgggctactgttgcatcctgggtcttacttcagggac
ccgtggaacatactggacttcatcgtagtcaccggtgctctggtggccttcgcctgctcg
agcttcatgggatcgcagcaaagcttgaccagaggaactaaaggcaaggacatcaacact
atcaagtccctaagggtccttcgagtcctgaggcccttgaagaccattaaacgtttgcct
aaactcaaggccgtgtttgactgcgtggtgaactctctgaagaatgtgctcaacatcctc
atcgtttacatgctcttcatgttcatcttcgcggttattgctgtgcagcttttcaagggg
aaattttttcactgcaccgacgaatccaaagccctggagaaggactgcaggggtcagttc
ctggagtttggcagtgatggactggccatgacactgccgcgcgagtggaagaagtatgat
ttccattatgacaacgtcctgtgggcctttttgaccctgttcactgtctctacaggagag
ggctggccaacagtgctgaaacactctgttgatgccacgtatgaagaccagggtcccagt
tcgggttaccgcatggaaacctccatcttttacgtagtctacttcatcgtcttccccttc
ttctttgtcaacatctttgtggctttgatcatcatcacgttccaggagcagggagataaa
gccatgtcagagtgcagcttggaaaagaatgagcgagcttgtatcgactttgccatcaat
gccaaacctctgacacgctacatgccgcaggacaagcagtcttaccagtacaagatatgg
aagtttgtggtgtccactccgtttgagtactccatcctgaccatgatcgccatcaacaca
gtggtcctcatgatgaagttccatgatgctcctaatccgtatgaggacatgttgaagtgg
ctgaacatcatcttcacggctctcttcacactggagtgcattctcaaggtcattgccttc
ggccctctgaactacctgaaggaggcatggaatatttttgactttgttactgtgctgggg
agcatcactgacatcctggttactgagatcgagacggataagaggattaatctgagtttc
ctgagactcttccgggccgcccgtctcattaaactcctacggcagggctataccattcgc
atcctgctctggacctttgttcagtcctttaaggctctgccgtatgtgtgtctcctcatt
gcaatgctcttcttcatatacgccatcattgggatgcaggtgtttggtaatatcatgttg
tccgaggagtcggctatcaacatccataataacttccaaacattttttcaggccctcatg
ttgttgttcaggagtgctacaggggagacttggcatgaaattatgctgtcttgtttgagt
gaaaggccatgtgaccgtgactctggatatactggaaaagagtgtggcagtgactttgct
tacttctactttgtctctttcatcttcctttgttccttcctgatgctgaatctgttcgtc
gctgtcatcatggataactttgagtacctaacacgtgacgcttctattctcgggcctcat
cacctcgacgagttcatccgtgtttgggctgagtacgaccctgccgcctgtggacgcatg
tcctacctcgaaatgtacgagatgcttcgccacatgtcccctccactaggtttgggaaag
aaatgtcctccaagaatcgcctataagcggttggtgaggatgaacatgcccatagctgaa
gatagtacggttcactttacctccactttaatggctctcatacggaccgccctggagatt
aaactggcatcaggagttctggctcagcggctttgtgatgctgaattaaggaaggaaata
aataaaatttggactaacttgtcttcaaaaacagtggacctgctggtgacacctcataaa
cataatgaattgactgttgggaaggtctatgctgctctcatgattttcgactattataag
cagaaccgagccaaaagactccagcagcagcaggctgcaccaggcacacagagtaaagtt
ggagttctcttcagaccaatgcttcctctcacacacttgcacggtcaggagccactagtg
ctaaaagccctgccctcttctcaattagataccacaccacagccagatgccccgcccaca
tcctttcacctgaccaatggggatgcagtacaaagccagagcagtgccatgaaaacgtct
ccatcaggagacatacctcaggaagtcacacaggaagcaaacagaaggcctgtccaaagg
ggccaatcggaagacgtgccaaacacatacagatctcaggaattagttgagatgactgac
atggagaatgactcagatgtgtgcgggtatcctgtgctggagggtcacagcagagctgcc
tccatgcccagactcaacgctggctttcagcggagccacttacgccacaccgccggaacg
tatctagcacctatcgcagacgtgagtcccatacggcggtctgtgtcctcgttgactcct
cagagaggggtgcgagaggtcaatctgagcgattatgacctggagaggcccaagatggcc
ccgggccagaccctcactcaggagagagagagggacagagctcatcatcatcatcaccat
catcaccgctgccagcggcgcagagacaagaagcacaaatcgctggatcgagtcatcagc
gaggagcagcctccccctgcagcagatccaaacactgagtcactgcctagggaacgagca
ggggagcgagaccgcggccgttcccatgagaggaagcaccattcatcctcagcggtggaa
aggaagcagcgatactactcttgcgaccgctacggcagccatgagcaaggccacagcgtg
tccgccgggcccagcagatccacatcgccaggagaaccccatgacccaaacaggcttaaa
cagggagttagcacagctaaaggaacttcagtcgtttatacctcaggcaccagcacacct
tgccgcgggcgtagacagctcccacaaacgccccttacccctcggcctgctgttgcctac
aagactgccaactcctctccggtccagctcaacactgcccagtctacagggccctgcccc
actcgccttagtcgtggcctgtcagagcacgatgccctactcagcggtagcacccaccgc
caatctcccgtgcctgtcactcgtatcggctctgaccccaacttaggtcccctccagcaa
gactcgcacttgtctgaatcggacgacttccacgatgccttgagcacgtacggcacgggc
cgctcccccaggactgcagcctctatcgcccacacttcatcaggtgcggcccccacttcc
acgctgctctcgcgcagccagagcggagtgcccaacgggtatcactactccctcggagtg
aacgcggcgcctgggtcgagcggtagagcatctggaagctaccaggagactgagagagat
gactggtgttag
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integrated database retrieval system
