Sinocyclocheilus rhinocerous: 107739845
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Entry
107739845 CDS
T04916
Symbol
dennd4b
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107739845 (dennd4b)
Membrane trafficking [BR:
srx04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107739845 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
107739845
NCBI-ProteinID:
XP_016407542
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MTEERCPQLVDYFVVAGLSGAGSPLDEEGERRGVRTLQPVTDLAVIARGLGEDVPEGFTC
IEKTQAGHPAELSAGLLNNTHMFLCYRRGHDKPPVVELGVLYEGKDPVRSGWQVIETTPY
SRSASLSSGGPATHRTFLMFRRAPDSQALNTLGITEISLLMPSKGETAPHTYCRVDKNLN
TGMWGPALYLCYKRSVAKANALVYEAGLISRYPEEDLESFPLPDSVPVFCLPMGVTVESW
PLNTKYQLPIFSTFVLTSASGDKVYGAAIQFYEAYPRESLSERQCVRLGLLSVVDRRPIT
NRSVQVKKSICVLSHWPFFSVFQKFLTFIYRYSISGPHVLPLEKHISSFMHNVPFPSAQR
PRNXLCLSSYDNLLLCQPVSSPLPLSGASFVKLLQNLGPENACSLLLAVLTEHKLLLHSL
RPDVLTSVSEALVSMPFPLRWHCPYIPLCPLRMADVLCAPMPFIVGVHSSYFELYDPPTD
VVCVDLDTNTIFQSEDKKPLSWRSLPRKHGKILLNSLSNLHKTLEKIYTPGQEEATLEFL
LTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRSFLLPITQAPSDRTTDCSSLFHLQGF
LKSRDRTQQKFYTQLTKTQMFTQFIEECSFVSDRHGCLEFFDECVQKVRRSPAVTXPQRP
IRSLLYHLCVSVSSHLYLSSAYNNTDCPAKQSQAMCLNKTRHEHAANKNTHKPRVHIRHD
NMKARKYMFTVSTVPEMWSKCLLGHCYGLWFICLPTFVRAESTKVRALHAAYEVLKHMET
RKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKRAGITPNTITYGYYNKAVLESKWPS
TNQGGRLRWAKLRNVVLAVAQFRQPIKQQQRSASFSTPAEDVLSKPRPHLALIRQSSWSG
LSESSSHESLTSLAKSNSLSSVQASGGKLKLLKKAAAQTAAASHKPPAGRRNTLSPPAPV
LVRRSDVCLSTFYRDCAENADADCRCQPERDSRSVEVRETLNKKSVDENYNNVLSPSRGL
AGKLQQLLTPTRNRASVRRAASVDDRRPGANGHSRQKPSRKSQMTESLLKAKERLYNATS
ESSLSVGSDIDMTDIQTLVVPHRKSWDSAQEGAGIEVLMSSCSLCRSCNSLVYDEEIMAG
WSSDDSNLNTTCPFCSAPFVPLLNAEICDLGPVCSVDRSNLSAEDELENIMRPPAAPDDT
LQHLCNGVRETDSSSETSSQSESSVPSVGGAPQVTVAYLSPLVLRKEMESLLENEGEAVL
SQVQLLDSHSILFWNLVWYFTRLAQTLSHTHTLRGAQLTVFVCQGSEGTAVRVRLLWDTL
TPDTEQWPPLHMLWKIHSGVPMRSHSWRHHNHPFSLSFLEEVLRWIGLNEVHKAITLFLD
TVAKQPGTPRIQRSLYREMLFLTLAAMGKDHVASFDKRYKAAYVRLSSSLGREELRRKRV
QPPSPKAVDCRRCFLLPLEC
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagcgctgtcctcagctggtggattatttcgtggtggcgggtctgtcaggc
gccgggtctccgctggacgaggagggtgagcggaggggcgtgagaacgctgcagcccgtc
actgatctggctgtgatcgcccgcggtctcggggaagacgttcctgagggattcacctgc
atcgagaagacccaagcaggccatccggcggagctgagcgcaggcctgctcaacaacaca
cacatgttcctgtgctaccgcagaggacacgacaaaccacccgtcgtcgagctcggtgtt
ctgtacgagggcaaggatccggtccggtcgggatggcaggtgatcgagacgactccgtac
agtcgttctgcgagcctgagctccggcggtcctgcgacgcaccgcactttcctgatgttc
cgccgagcgccggactcacaggcgctgaacacgctgggcatcactgagatctcgctgctg
atgcctagcaagggcgagacggcgccgcacacctactgcagagtggacaagaacctcaac
accggcatgtggggtccggcgctgtatctctgctacaagcgttcagtggctaaagcaaac
gctctggtgtatgaggcaggtctgatcagtcgctatcctgaggaggatctggagtcgttt
ccgctgccggactctgttccggtcttctgtctgccgatgggtgtgacggtagagagctgg
ccgctcaacactaaataccagctgcccatcttctccaccttcgtcctgactagcgcctcc
ggagacaaggtgtacggcgctgcgatccagttctacgaggcgtacccgcgcgagtctctg
tcggagcgtcagtgtgtgcgtctgggtctgctgagtgtcgtggaccggcggcccatcacc
aaccgcagcgttcaggtcaagaagagcatctgcgttctctcacactggcccttcttcagc
gtcttccagaagttcctcaccttcatctacagatactccatctctggaccgcatgtgctg
ccgctggagaagcacatctcaagcttcatgcacaacgtcccgttcccgtccgctcagcgt
cctcggaattaactgtgtctctcttcgtatgataatctgctgctctgtcagcccgtgtca
tctccgctgccgctcagtggggccagttttgtgaagctgctgcagaatctgggtcctgag
aacgcgtgttcgctgctgctggcggttctgaccgaacacaagctgctgctgcactcgctg
cggcccgatgttctgacgtccgtcagcgaagcgctcgtctccatgccgtttcctctgcgc
tggcactgtccgtatatcccgctgtgtccgctgcggatggcagatgtgttgtgcgcgccc
atgcccttcatcgtgggcgtccactccagctacttcgagctttacgatccgccgactgac
gtggtgtgtgtggatctggacaccaacaccatcttccagtctgaagataagaagcctctg
tcctggaggtctttgccgaggaaacatgggaaaatcctgctgaactctctgtccaacctg
cacaaaactctggagaagatctatactccgggtcaggaggaggccacgctggagttcctg
ctgacggattacgatctgatctacggccgtcagaagcagctggagctggagatccaggag
gcgttcctgcgcttcatgagctgtttgctgagaggataccgatccttcctgctgcccatc
acacaagcgccctccgaccgaaccacggactgcagctcgctcttccacctgcaggggttc
ctgaagtctcgcgatcgaacgcagcagaagttttacacgcagctcacaaagacgcagatg
ttcacgcagttcatcgaggagtgttcgttcgtcagcgaccgccacggctgcctcgagttc
ttcgacgagtgcgtgcagaaggtcagacgctcacctgcagtcacctgaccgcagcggcca
atcagatcgctcctgtatcacctgtgtgtgtctgtgtcaagtcacctttatttatcaagc
gcttataacaatacagattgtccagcaaaacaatcacaagccatgtgcttgaacaaaaca
agacacgaacacgcagctaataagaatactcataagccgcgtgttcacataagacatgac
aacatgaaagcacgcaagtacatgttcacggtttcgacggtgccggagatgtggtccaaa
tgcctgctgggtcactgctacggactctggttcatctgcttaccaacattcgtcagagca
gagagcactaaagtccgagcgctgcacgccgcatacgaggtgctcaaacacatggagaca
cgcaaggtggtgctgccagacgaggtgtgttaccgtatcctcatgcagctgtgcggtcag
tacggtcagccggttctcgcggtcagagttctgctggagatgaagcgggcgggaattaca
cccaacaccatcacatacggatactacaataaagcggtgctagagagcaaatggccatcc
accaatcagggagggcgtcttcgctgggcgaagctgcgtaacgtggtattggccgtggct
cagttcaggcagccaatcaaacagcagcagaggagcgcatcattcagcacccccgcagaa
gacgtactgtccaagccccgcccccacttggctctgattcgtcagtccagctggagcggg
ttgagtgaaagctcgagccacgaatcgctgacgagtctggccaagagcaacagtctgagc
agcgttcaggcgtcaggaggcaagctgaagctgttaaagaaagcagctgcgcagacggcc
gcagcctcgcacaagcctcccgccggccgccgcaacacgctgagtcctccggcgcctgtg
cttgtgcgccgcagcgacgtctgcctgtccaccttctacagagactgcgcagagaacgca
gacgcagactgcagatgtcagccggagagggacagcaggtcggtggaagtgagggagact
ctgaacaaaaagtcggtggatgaaaactacaacaacgtgctatctccgagccgcggtctg
gccgggaaactgcagcagctgctgacgcccacgaggaaccgtgcatcggtgcgacgagcc
gctagcgtagacgaccggcggccgggagcgaacggacactcgcgccagaaaccctcgcgc
aagagccagatgaccgagagtctgctgaaggccaaggagcggctgtacaacgccacgtct
gagagttctctgtctgtagggagtgacattgacatgacggacattcagacgctggtggtt
cctcacaggaagtcgtgggattctgcacaggaaggggcgggcattgaggtgctgatgtcg
agctgctcgctgtgccgcagctgtaattctctggtgtatgatgaggagatcatggcgggc
tggtcgtctgacgactctaatctcaacaccacctgtccgttctgctccgcgccgttcgtg
ccgctgctaaacgcagagatctgtgacctggggcccgtctgcagcgtggatcgcagtaac
ctgagtgcggaggatgagctagagaatatcatgcgtcctcccgccgctccggatgacaca
ctgcagcacctgtgcaacggcgtcagagagacggactccagctctgagaccagtagccaa
tcagagagcagcgtgccgtcggtgggcggggccccgcaggtgacggtggcgtacctgagc
ccgctggtgctgcgcaaggagatggagagtctgctggagaacgagggtgaggctgttctc
tctcaggtccagctgctggacagtcactccatcctcttctggaatctggtgtggtacttc
actcgccttgcgcagactctctctcacacacacacactgagaggagctcagctgactgtg
tttgtgtgtcaggggtcagagggcacggcggtgcgtgtgaggctgctgtgggacacactg
accccggatacggagcagtggccgccgctccacatgctctggaagattcacagtggcgtc
cccatgcgcagccacagctggaggcatcacaaccatcccttcagcctcagcttcctggag
gaagtgctgcgctggatcggtctgaacgaggtacacaaggccatcacgctcttcctggat
acagttgctaagcagcccggcactccgcggatacagaggagtctgtacagagagatgctc
ttcctcacgctggccgccatgggcaaagatcacgtcgcttcctttgataagcgttataag
gcggcgtatgtgcgcttgagcagttctctgggccgagaggagttgaggaggaagagagtc
cagccgcccagtcctaaagccgtcgactgcagacgctgcttcctgctgccgctggagtgc
tga
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