Sinocyclocheilus rhinocerous: 107739934
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Entry
107739934 CDS
T04916
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107739934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
srx04990
]
107739934
Domain-containing proteins not elsewhere classified [BR:
srx04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
107739934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
PLAC
TSP1_spondin
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
107739934
NCBI-ProteinID:
XP_016407671
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MCHQTTRQIWSDPQQTGSEGAPSRLWSSWGSWGECSRSCGGGVQEQTRVCLPHYPAVRDA
SAAPQSPAAQNTASNTPNQRRLSVGRYGWRANSSRISPGTYGYSRMPYVTSLQKESSRTS
HKQRRSASNFPHQSYRTHQRNPYQNTRHHTAAQPPTAAQHTQPQMNTAAVQSRPYNPLPN
TSCPGAPNRHKICNSMACPSPSRPIRELQCSTFNTQPFMGRFYQWEPFYDVSSEQRCELN
CRAVGLRFYVRQADRVIDGTPCGQNQTSVCVAGQCQSAGCDDLLGSGRVPDKCGVCGGDN
SACKLVSGLFQHSLSKVGYHKIVEIPPGATKINVTEMVKSRNYLALLSRSGRSIINGNWA
IDRPGMYEGVGTMFTYRRPNEISSTAGESFLAEGPTNEILDVFMIYQQLNPGVHYEFLMP
SENAVDAPRPKQNQLDLNAVNGPAGSDANGPSTPEDHERSGVSYPPPVPDNQLPAAPHST
GAREYNWKLSGTTDCSASCGRGSRFSVFVCVHRGSHALVPIDLCDSRTKPSPQEEPCNVQ
PCPAFWDIGEWSECSKSCGLGVQYRQVLCLGQRSREVHCVSNVGDIVADDECNMKLRPSD
VENCDAGVCTKSWFFSDWSAQCSADCGSGVRTRSIQCLTNHISSLPLERCGAQRPPEAQP
CNNGPCESRTEWFTGPWSQCCGSGSQQRAVVCLMRSDEGFVVMPSYECSSLDKPLSQQSC
FIKTCGAKWFHTDWSACSKTCETGYRVREVRCLTDDMTTSDHCEETLKPHDKEECHPEPC
LPLIDEKCRDKYFNCNVVVQARLCVYDYYQMACCVSCKRVAQRSSAHWRQRS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatcagacaacaaggcagatctggtctgatccacagcagactggttctgaaggc
gcgccgtcgaggttgtggagctcctggggttcgtggggcgagtgttcgcgctcctgcggc
ggaggagttcaggaacagaccagagtctgtctgccacactatccagcagtccgtgatgca
tcagcagcaccgcagagccccgcggcacagaacacggcctcaaacacgcctaaccagaga
cgcctgagcgtcggcagatacggatggagagcgaacagtagccgcatcagtccagggacg
tacggatacagcaggatgccatatgtaacgtctctacagaaagaatccagccgaacgtcc
cacaaacagagacgttcagcatcaaacttcccacaccagagttacaggactcatcagaga
aacccgtatcaaaacacccgccatcacacagccgcccagccgcccactgctgcccaacac
acccaaccgcagatgaacacagcggcagtgcagagcagaccgtacaacccgctaccaaac
acctcctgccctggagccccgaaccggcacaagatctgcaacagcatggcctgtccgtca
cccagcagaccaatccgagagctgcagtgctccacgttcaacacgcagcccttcatgggc
cgattctaccagtgggaacctttttatgacgtttccagcgagcagcgctgtgagctcaac
tgccgcgccgtcggcttgcgtttctacgttcgtcaggcggacagagtcatcgacggcact
ccgtgtggacagaaccagacgtctgtgtgtgtggcgggacagtgtcagagcgccggctgt
gatgatctcctgggctctggtagggttcctgataaatgcggcgtgtgcggcggagacaac
agtgcgtgtaagctcgtctctggcctgttccagcacagtctgtctaaagtgggctatcac
aagatcgtggagatcccgccgggagccaccaagatcaacgtcactgagatggtgaagagc
aggaactacctggccctgctcagccggtctggtcgatccattattaatggaaactgggcc
atcgaccgtccaggaatgtatgagggagtgggaacgatgttcacgtaccggcggccgaat
gagatcagcagcaccgcgggagagtccttcctagccgaggggccgaccaatgagatcctg
gatgtgtttatgatctaccagcagctcaatccaggcgttcattatgagttcctcatgccg
tcagagaacgctgtagatgctccgcgtcctaaacagaaccagctggacctgaatgctgtg
aacggtccggctggttctgatgcgaacggcccgtcgaccccggaggatcacgagaggtca
ggggtcagctatcctcctcccgtcccggataatcagcttcccgcagctccgcattcaacc
ggagccagagaatacaactggaaactcagcggcaccacagactgcagcgcctcctgtgga
cgaggaagcaggttctctgtgttcgtctgtgttcaccgaggatctcacgctctcgtgccg
atcgatctgtgcgacagcagaaccaaacccagccctcaggaggagccgtgtaacgtccag
ccctgccctgccttctgggacatcggcgagtggtccgagtgcagtaagtcgtgtggtttg
ggagtacagtatcgtcaggtcctgtgtctaggtcaaaggtcacgtgaggtgcactgtgtc
agtaatgtgggtgatatcgtggctgatgacgagtgcaacatgaagctgcgtccgagtgac
gtggagaactgtgacgcaggtgtgtgcaccaagagctggttcttcagcgactggagcgct
cagtgttcggcggactgcggctcgggggtgcggacacgcagcattcagtgcctcaccaat
cacatcagcagtctgcctctggagcggtgcggggcccaacggccccccgaggcccagccc
tgcaacaacggcccctgtgagagccgcacggagtggttcaccgggccctggagtcagtgt
tgtggctccggtagtcagcagagggcagtggtgtgtctgatgaggtctgacgagggtttc
gtcgtgatgccgtcatacgagtgctcgtctctggacaaacccctcagccagcagagctgc
ttcatcaagacctgcggagccaagtggttccacaccgactggagcgcgtgctcaaagacg
tgtgagacggggtaccgcgtgcgagaggtgcgttgtctaaccgatgacatgaccaccagc
gaccactgcgaggaaacactgaagcctcatgacaaggaggagtgtcaccctgagccctgc
ctgcctctgattgatgagaagtgtcgtgataaatacttcaactgtaacgtggtggtgcag
gcgcgtctctgcgtgtacgactactatcagatggcgtgttgcgtgtcctgcaagcgtgtg
gcgcagaggagctccgcacactggagacagcgatcgtga
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