Sinocyclocheilus rhinocerous: 107740130
Help
Entry
107740130 CDS
T04916
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107740130
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107740130
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107740130
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107740130
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107740130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF7171
PepSY
Motif
Other DBs
NCBI-GeneID:
107740130
NCBI-ProteinID:
XP_016407936
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MMCQSANAMWSRWSAMLVWIFLLLCCSANVVSTIIYQVTEEQPPNTLIGSLASDQGLPDT
GHLYKLEVGAPYLRVDGKTGDIYTTETPIDRETLKDCRNLFEGDPCFLEFEVSITDLMKG
TGPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDKDSGSNGIADYA
LTTGPEAANLFSLQVAQDSDEKLPQLIVLGNLDREQRDSYDLNIKVVDGGSPPRQSSALL
RITITDANDNVPKFEKSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQASPIV
QRLLSIDRNTGTIFVKGLVDREDISMLKFYVQAKDNGPQSKSSKALVTITVKDLNDNAPS
IRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSAS
ETGNDRKRKYFLQTTMLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNSPVF
SPSLYEVEVAEENQPGDKVLDVVATDADSGTNAELTYSIAGGSVPEGLFEINPNTGEVRV
MSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLSGYSFSVQENMP
PLSPVGMVTVNDRDEGNNAHVELSVEPDNGKFMIQNGTYTILSTISFDREKESTYSFRLK
AVDGGDPPRSSYVGITINVLDENDNSPYVTKPSNSSYKFLDPRTSPETHVERVEAEDMDI
GLNSELEFSIVGGNPHGLFRISSEGEITLAKEFTSKHIGLHRLVVKVKDKGAPPRHTTAL
VHIYVNETIGNVSHVEGLVGHSLYTPLEMDIAGDPDYSRDQQSSIIFAVLGGFCVVVLII
AVAMIIRHVVLKENKSGYQAGKKETKDLYAPKPGPKSNKNKKAKKSKAPKPANPSEEDEG
GSLQKGLKFNLMNDSVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKK
HQAVQDLPATNTFVGTGDNNSTGSDQYSDYSYKANSSKYSTKQLPHRRVTFSTANQAQDL
QDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRP
LPDVAMTGKCTHECTEYGHSDSCWMPGQPSPNHTKSAKSGPKLSTFVPYQEREGQERLMA
DSSSKPHGEERSGGGSNKVASIRFLPPYTSAYSTGGDSSKDCPREEIPLSQTADYAPATT
PSSQGSKREIYL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgccagagtgccaatgcaatgtggtcacggtggagtgccatgctagtgtggatt
ttccttctcctctgttgctctgcaaatgttgtcagcaccatcatctaccaggtgactgag
gagcagccgcctaacacactgattggcagcttggcatctgaccagggcctgccagacact
ggtcacctttacaagcttgaggtgggcgctccttacctccgtgtggatggcaaaacaggg
gatatctacaccacagagaccccgatcgatcgtgagactctcaaggactgtcgcaacctt
ttcgagggcgatccttgtttcttagaatttgaggtatctattacagacctgatgaaaggc
acaggacctcgactcatcgaaggccgcatcgagatcttggatgagaatgacaacactcca
cagttctcttcacccgtcttgacattgtcgatcccggagaacacgcacgtcggtgcgctt
tttgccatacctgtggccactgacaaggattctggaagcaatggcattgccgattatgcg
ctaacaactggccctgaagctgccaaccttttcagcctgcaggtggcgcaagactcagat
gagaaattgccacagctcattgtattgggaaacctggatagagagcagcgagattcatat
gacctcaacataaaagtggtcgatggtggctctccaccccgccagagtagcgccctgctc
aggatcaccattacagatgccaatgacaacgtgcccaaatttgagaagtcacattatgag
ggtgagctccccgaaaacagcccagtgggtcattctgttctacaagtgaaggccaatgac
tctgacatgggacccaatggagaggtgacctacagcctccaccaggcatcaccaattgtc
cagaggctccttagcattgaccgcaacacaggcaccattttcgtcaaaggcttggtggat
cgtgaagatatcagcatgctcaagttctacgtccaagctaaagacaatggtccacaatca
aagagctccaaagcccttgtgactattacagtgaaggacctgaatgacaatgcaccctca
atcagaatccggggcattggccttgtgacgcatgaagatggtgttgctaacatatcggag
gacatgcctgtaggcacagctgtggctctggtggaggtatcagatcgtgatgaaggtgaa
aatgcagttgtaacctgtgtggtggcaggggatgtcccattccagctgcgttcagctagt
gaaacaggcaacgaccgcaagaggaaatacttcctccagacaaccatgctgctggactat
gagcggatcaaagactacaggattgaaattgtggcagtggactctggcaaccctgcacta
tccagcacaaattccctgaaggtgcaagtgacagacatgaatgacaactccccggtcttt
tcgccctctttgtatgaggtagaagttgctgaggagaaccagccaggtgacaaggttctt
gatgtggtagccacggatgccgacagtgggactaatgcggagctgacatacagtattgct
ggtggatcagtccccgaggggctatttgaaattaaccctaacacaggagaagtgcgtgtc
atgagccagttggaccgtgaacaattagatcactatcaatttctagtcgcagcagctgat
aaaggtgtaccaagcttgagaggaactgccactgttgttgttaaggtgctcgacaggaac
gacaatgaccctaaatttatgctcagtggttacagcttttcagtccaagaaaacatgcca
ccccttagtcccgttggaatggtaacagtcaacgatcgtgacgagggcaacaatgctcat
gttgaactctctgtagaaccagacaatggcaagtttatgattcaaaatggaacgtacact
atactttcgactatttccttcgacagagaaaaggagagcacctacagtttccgacttaaa
gctgttgacggaggtgatccaccacgttcctcctatgttggcattaccattaatgttctt
gatgagaatgacaattctccatatgtcaccaagccttcaaactcttcatacaagttcttg
gatccccgcaccagcccagaaacccacgtagaacgtgttgaggcggaggacatggacatc
ggtttaaattcggagctggagttcagtattgtagggggcaacccgcatggcttattccgc
atctcttcagaaggtgagattacgttggctaaagagttcacatccaaacacattggtctc
caccgtctggtagtaaaagttaaggacaaaggcgcgccaccacgccatacgaccgcactg
gttcacatttatgtcaatgagaccatcggcaatgtctcccacgtcgaaggacttgttgga
cacagtctttatacgccacttgaaatggacattgcaggagatcccgattattctcgagac
cagcaaagtagcattatttttgcagtcttgggtggcttttgtgtggtcgttctaatcatt
gcagtggctatgatcatcaggcatgtcgtgctgaaggagaataaaagtggctaccaggca
ggcaagaaggagaccaaagacctctatgcccccaaaccaggacctaagagcaacaagaac
aagaaggcaaagaaaagcaaagctccaaagcctgccaacccatctgaggaggatgagggg
gggagtctccagaaaggcctaaagttcaacctcatgaatgatagcgtcaacgatagccct
aggattcacctgccgctcaactatccccctgggagcccagacctggggcgacactatcgg
tctaattctcctctgccatccattcagcttcaacctcagtcaccttctgcctcaaagaaa
caccaggcagtgcaggacctgccggccaccaacacctttgtaggaaccggggacaacaac
tcaacaggctcagaccagtattcggattacagctacaaggccaactcttcaaaatatagc
accaaacagctcccacatcgccgagtgaccttctccacagccaatcaggcgcaagatctg
caggatccctctcagcacagttactacgacagcggtctggaagagtcagagacacccagc
agtaagagttcttcagggccccgtatcgggccccttgccctacctgaagaccactatgaa
cgcactaccccagacggcagcatcggagagatggaacaccccgagaacgatctgaggcct
ctacctgatgtggccatgacgggaaaatgcacacacgagtgtacagaatacggccactcg
gattcctgctggatgcctggacaaccctcacccaaccacaccaagagtgccaagagcggg
cccaagctctccaccttcgtgccttaccaggaaagggagggtcaggagcgcctgatggct
gacagcagctctaagcctcacggagaggagcggagcggaggcgggagcaacaaagtggcc
agcattcgctttttgcctccctacactagtgcctattctacaggcggcgactccagcaag
gactgccccagggaggagatccccctgagtcagacagccgattacgcccctgccactaca
ccctccagccaaggctccaaaagagaaatctacctgtga
DBGET
integrated database retrieval system
