Sinocyclocheilus rhinocerous: 107740630
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Entry
107740630 CDS
T04916
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
srx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107740630
03015 mRNA surveillance pathway
107740630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107740630
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107740630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
107740630
NCBI-ProteinID:
XP_016408596
UniProt:
A0A673FVW5
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MADRRRRRRRASQDSEEEDESASGSECGRSLSGGRKPREGDPEPLESPAERVCAKSVVHT
ESECESEDGVGEAVLSDYDSADLEENGSHTEGGEDEEEGEHFSDEEASRPAAEPKPTADA
PTEELGEKEERDGVGKEVKSDEKGNLAGERQSGDGQESTEDPENISGSKGQKLDDDEDRK
NPAYIPRRGLFFEHDVRGQATEEERPKGRHRKLWKDEGRWEHDKFREEEQVPKSREELIS
LYGYDIRNGTGPSDGRSYRSRKPRHAGSPSREPRRHRDGEKSVCTTWQAPPPGHRNTPHS
VPLQSGPPPAPPAAPKPSSRPSTQPPQRSFQSSRALSASHRTEGQRHSKPSLDGPPPRGV
RPQPVESERGPRLRGRGSHAVHAERSPAMVVEDVRSEEDEEEGEIPTATTTYTAHHYKTE
RERVPSPRKRESGPVMEGGSAAGQVRESSSPQERPVEKKSYSLGRRATRMRPSDLGKQAS
LDESSPAVQQAPAAAKSESWQEQSDAGTQGGLTGLDQDLARLSLAGQNWTQSAPSYLQAE
MRGIRSSMHMAGGPPQYGNMEDMGVGGGRAKRYSSQRQRPVPEPAPMHIGVMEGHFYEPM
SFQGPIYAHGESPAALPPQGMLVQPEMHLPHPTHPGHPGLHPHQSGGPMPNPALYAAPPV
SMSPGQPPPQQLLPPPFYPPPGVMTFGNTNYPYPAGATLPPIYPNPQAQSQVYGGVTYYD
TVQQQAQPKRSPPRRSSHPVTVRPPPPEDQSRNAAEEIRS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgacggagacggcgcgcctctcaggacagcgaggaggaggacgag
tccgcctcgggctccgagtgcgggaggtcgctgtctggcggccggaagcctcgcgaagga
gaccccgagccgctggagtcgcccgcggagcgcgtctgcgccaagagcgtagtacacact
gagtcggagtgtgaaagtgaagatggtgttggtgaagcagtcttatcggactatgacagt
gctgatctggaggagaatggatcgcacacggagggaggagaggatgaggaggagggagag
catttcagtgatgaagaggcctcacgtcctgccgcagaaccgaagcccactgcagatgcc
ccgacagaagagcttggtgaaaaggaggagagagatggagtgggcaaggaagttaaatct
gatgagaagggcaatctagctggggagcgacagagtggggatggacaggaaagcacagag
gaccctgagaatatatcaggcagcaaaggccagaagcttgacgatgatgaggacaggaag
aatccagcctacatcccccgaagaggccttttctttgagcatgacgtgagaggccaggct
acagaggaggagaggcctaaaggcaggcacaggaagttgtggaaggatgagggccgatgg
gaacacgacaaattccgtgaagaggagcaggtgccaaaatcacgtgaagagctaatttct
ctctatggttatgacatccgcaatggcacagggccgagtgacgggcggtcgtaccgctcc
cgaaaacccagacatgcgggttcgcccagtcgagagccgaggcgccatcgtgacggtgaa
aagtcagtttgtacaacatggcaggcgcctccacctggccaccgcaatacccctcattct
gttcccctacagtcaggcccacctcctgctccccctgcagcacccaaaccctccagccga
ccctcgactcagcctccccagcgcagcttccaaagcagtcgtgccctgtcggcctcccac
aggacagaaggtcaaagacactcgaaacccagtctagacggcccgccacctcgaggagtg
cggccacagcctgtagagagtgagaggggcccgaggctcaggggccgaggctcacatgct
gttcacgctgagcgtagcccggccatggtggtggaggacgtccgcagtgaggaagatgag
gaggagggtgagattccaacagcgacaactacatatactgctcaccactacaagacggag
agagagagggttccgtctccacggaaacgagagtcgggcccagtgatggaagggggcagt
gcagccggtcaggtgcgagaatcgtcgtctcctcaagagaggccggtggaaaagaaatcg
tactctcttgggcggagggcgacgcgaatgcgaccgtctgatctcggtaagcaggcgtca
ttagatgagtcttctcccgcggtccagcaagccccagcggcagcaaagagcgagtcgtgg
caagagcagagtgatgctggaacacaaggtggactgacaggcctcgaccaggacctggcc
cgactcagcctggcggggcagaactggacccaaagcgcaccctcctacctgcaggccgag
atgagaggcattcgtagctccatgcacatggcaggaggccctccacagtatggaaacatg
gaggatatgggtgttggtggtggccgggctaagcggtattcatcacagcgccagaggcca
gttcccgagcctgcacccatgcacattggagtcatggagggccatttttatgaacccatg
tctttccagggaccaatctacgcgcacggggaaagcccagcggccctgccccctcaaggc
atgctagttcagcctgagatgcacctgccacaccccacccaccctggacacccaggcttg
cacccgcaccagtcaggagggcccatgcccaatccggctctttatgcagccccacccgtt
tctatgtcacctgggcaaccgcctccacagcagctgctacctccacccttctaccccccg
ccaggtgtgatgacctttgggaacaccaactacccgtaccctgccggagctacgctacct
ccaatctaccccaacccccaggcacagtcacaggtctacggtggtgtgacgtactacgac
acggtacagcagcaagctcagcccaaacgctccccgccccgacgctcctctcatcccgtt
acagtcagacctccccctcctgaggaccagagcagaaatgccgctgaggagattcgctcc
tag
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