Sinocyclocheilus rhinocerous: 107740788
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Entry
107740788 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107740788
03036 Chromosome and associated proteins [BR:
srx03036
]
107740788
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
107740788
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
107740788
SLIK complex
107740788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
HDA2-3
Chromo
CHDCT2
Serglycin
Motif
Other DBs
NCBI-GeneID:
107740788
NCBI-ProteinID:
XP_016408776
LinkDB
All DBs
Position
Unknown
AA seq
1545 aa
AA seq
DB search
MAVTRFWKSNPSILTVQRSAMLRKQQLQQQQLQQQSSSNTGSDEVLHALTAAQSLSENAX
HKNDHRFANACGYKSDSDSGSGSGSGSSDSSAEEKGNSDESVSDYEPSHKVKSRKPSNKA
NARNGRNNNAPKKKPSRSSSDDEDDYKKALAGPRRQATVNVSYKEDEELKTDSDDLVEVC
GEDVPPPEEDEFETLERVMEMRIGRKGATGAVTTVYAVEADGDPNTNFDPNRQPGEVQYL
MKWKNWSHIHNTWETEETLKQQNVKGMKKLDNFKKKDQEKKKCWEDGALIARKFQKCIDE
YMSRNQCKTIPSRECKVLKQRPRFVPMKKQPPYIGADGLELRDYQLEGLNWMSFLGNVSW
AFIGVDEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPIKFHSW
ELFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKW
ILTRNYKALSKGTKGSKSGFLNVMMELKKCCNHCYLIKSPEDEFYNRQEGLQHLIRSSGK
LILLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDH
FNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNI
YRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSSIL
KFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMMEE
EEIDMDTERDDRNWDDIIPEEQRRRLEEEERQKELAEIYLLPRMRKCAKQNNFNGNEGRR
SRNRRYSGSDSDSVSDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLERLD
AIARDAELVDKSEHDLRRLAETVHNGCLKTLRENPCGPERSSGGRRGKVKGPTFRISGVQ
VNAKLVISHEEELAPLHKAIPADPEERKRYIIPCHSKAAHFDIEWGKEDDSSLLIGIYEY
GYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQAGT
ANSRKRKPRGKKNKAVKPKMDDVTNSLSSAPPSDKSSEEEDEKEEEEKETPPVKPPNRRA
CVSERSVKEEEDEDEDEESDEDEPEDKEPEEKDIMEKVVKKEIKKEMKEEGLDSKEWEPK
EKEMKPEPEEETPAEKAVEVKADTPVHTPSGGEALPLSEESEELDQKTFSVCKERMRPVK
AALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLREYTNPEQIKQWRKNLWIFVSKF
TEFDARKLHKLYKHAIKKRQENAQAVEQNTSTVNTQSFKHADVERIKESQQDDSSRDSYS
SDRHHSSRYHEHSKDRHAGDSYRKSSDARKRPYSSFSNGKDHRERERDQYRERGERQDSR
YYSDSKHRRLDEHRSSREHRSESNSKDRTHSEHRFHSEHRSASDYTHHKSSRDYRYHSDW
QMEHRPRSPRDQRSPYDSRSPLGHRSPFEYSSDHRSTPEQSGRKT
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaccagattttggaaatccaatcccagtatcctgacagtgcaaaggtcagcc
atgctcaggaaacaacagcttcaacagcagcagctccagcagcagagctcctcaaacact
ggctcagacgaggtactgcatgctctgactgcagcacagtcactaagtgaaaatgctnnc
cataaaaatgatcatagatttgcaaatgcctgtggttataagtcagactcggactctggc
tctggttcaggaagtggctcgtctgactcttcagcagaggagaaagggaacagtgacgag
tccgtgtcagactatgagcccagtcacaaagtcaagagcagaaaaccttcaaacaaggcc
aatgccaggaatgggagaaataacaatgctcctaagaagaagccctcccgctcctcctca
gatgacgaggacgattataaaaaagctttagcgggacctcggcggcaggccactgtcaat
gtgagctacaaagaagatgaggaactgaagactgattcagatgacctggtggaggtgtgt
ggagaggacgtcccaccgccggaggaggacgagtttgagacactggagagagttatggaa
atgaggataggccggaaaggagcaacgggggccgtaaccacagtgtatgcagtagaggca
gatggggaccccaacaccaactttgaccccaacagacagccaggagaggtgcaatacttg
atgaagtggaagaactggtcccacattcacaacacctgggagacagaggagacgctcaaa
caacagaacgtgaagggcatgaagaaactggacaacttcaagaaaaaagatcaggagaaa
aagaaatgctgggaagacggtgctctcattgccagaaagtttcaaaagtgcattgatgaa
tacatgagtcggaatcagtgcaaaaccattccctccagagagtgcaaggttttaaaacag
aggccacggtttgtacccatgaagaagcagcctccttacattggcgcagatggattggag
ctgcgcgactatcagttggagggtctgaactggatgtcatttttaggaaatgtgagctgg
gcgttcattggtgtagatgaggcccatcggctgaagaacgacgactcactcctctacaag
actatgattgagttcaagtccaaccacaggctcctgatcacaggcacacccctccagaac
tcactcaaagagctctggtctctgctgcattttattatgcctataaaatttcactcgtgg
gagctgtttgaagaggaacatggcaaaggcagagactctggctataccagccttcataag
gagctagagcccttcctgctgcgcagagtgaagaaggatgtggagaaatctctgcctgcc
aaggtggagcagatcctcagggtggagatgagcgctgttcagaaacaatactacaagtgg
atattgacgagaaactataaagccctgagtaaaggcactaaaggaagcaagtcgggcttc
ctcaatgtcatgatggagttgaagaaatgctgtaaccactgctacctcattaaatcgcct
gaggacgagttctacaacagacaagaaggcctacagcacctcattcgcagcagtgggaag
ctgattcttctggataagctgctggttcggctgaaggaacgagggcaccgtgtgcttatc
ttctcccagatggtccggatgctggacatcctggctgagtacctgaagtaccggcagttc
ttattccagagactggatggttccataaagggtgaaatgaggaagcaggctttagatcat
ttcaatgcagagggctctgaggatttctgcttcctgttgtccacgcgagcaggtggtctg
gggattaacctagcctctgcggatacagtggtcatttttgactccgactggaaccctcag
aatgacctgcaggcccaggccagagcgcacaggattggtcagaaaaaacaggtgaatata
taccgtctggtgacaaagggctcagttgaggaggagattattgagagagccaagaagaaa
atggtgttggaccacctcgtgattcagaggatggacaccactggaaagacagtccttcac
acgggtgctgctccttccagttctactccattcaacaaggaggaactgtcatccatcctg
aagtttggtgctgaagaacttttcaaagagccggaaggagaggaacaggaacctcaggag
atggacattgatgaaatcctgaagagagcagagaccagagagaacgaccctggaccatcg
actgtaggagaagagctcctctctcaatttaaggtggcaaatttctccatgatggaggag
gaggagattgacatggacactgagagggatgataggaactgggatgacattatcccagag
gagcagcggaggagactcgaggaagaggagcgacaaaaagagctagcagagatctattta
ctgccccgcatgaggaagtgtgctaaacagaacaactttaatggaaatgagggcaggcgt
agccggaacagacgatactctggttcagacagcgactctgtctccgacagaaagaggccc
aagaaacgaggaagacctcgaactattccaagagagaacattaagggtttcactgatgct
gagatacgcaggtttatcaaaagttataaaaagtttggtggccctttagaaaggcttgac
gctatcgctcgcgatgctgagctggtggataaatcagagcatgatctgcggcggctggct
gagaccgtacacaacggctgtttgaaaacgctaagagagaacccctgtggacccgaacga
agctcaggaggcaggcgagggaaggtgaagggacccaccttcaggatctcaggggttcag
gtcaatgctaagctggtgatctctcatgaggaggaactggcaccattacacaaggccatt
cccgctgaccctgaggagaggaagaggtatataatcccatgccactcaaaggcagctcat
tttgacattgagtggggtaaagaggacgactccagcctgcttattgggatttatgagtac
ggttatggcagctgggagatgatcaagatggacccagacctcaacctcacacataagctc
cttcctgatgaccctgacaagaagccacaggccaagcagttgcagacacgagctgactac
ctcatcaaattactgagcaaagacctcgccaagaaggaagcacagaaacaggcaggcaca
gcaaattcacgcaagagaaaaccacggggcaagaagaataaagcggtaaagccgaagatg
gatgatgtgacgaacagtctgtcctctgcaccgccatcagataagagctctgaagaagag
gatgagaaggaggaagaggaaaaggaaactccaccagttaagccgcccaacagaagagca
tgtgtgtcagagcggtcggtaaaggaggaggaggatgaggacgaggatgaagagtctgat
gaggacgagcctgaggataaagagcccgaagagaaggacatcatggagaaagtggtcaaa
aaagagattaagaaggagatgaaagaggagggtctggacagcaaagagtgggaaccaaaa
gagaaggagatgaagccagagcctgaagaagagactcctgcagagaaggctgtagaggtg
aaagccgatacccctgtgcacacgccctccggaggagaagcacttcccctgtctgaggag
tctgaagaactggaccagaaaaccttcagcgtgtgtaaggagcgcatgcggccggtgaag
gcagcactcaagcagctggatcgtccggagaagggtctgtctgagcgcgagcagctggag
cacacgcgtcagtgcctgatcaaaataggagatcacatcaccgagtgtctgagagaatac
accaaccccgaacagatcaaacagtggaggaaaaatctgtggatatttgtttcgaaattc
acggaatttgatgcaaggaaactgcataaactatacaaacacgccatcaagaaaagacaa
gaaaatgctcaggcagtggagcagaacactagcactgtaaatacacaaagctttaaacat
gcagatgttgagcggataaaggagtcccagcaggacgacagcagcagagacagctacagc
tctgacagacatcactcatctcgctaccatgaacacagcaaagatcggcacgctggcgac
tcgtacaggaagagctccgatgccaggaagagaccctactcctccttcagcaacggcaaa
gaccaccgagagcgagagagagaccagtacagagagagaggagagcgacaggacagcaga
tactacagcgacagcaagcacaggaggctagacgagcaccgctccagcagagagcaccgc
tcagaaagcaactccaaggacaggactcactccgaacaccgcttccactctgagcaccgc
tctgcctccgactacacgcatcacaaatcgtcccgggactaccgctaccattcagactgg
cagatggagcaccggccgcgctctccccgagaccagcgctccccatacgactctcgctct
ccgctgggacaccgctcgcccttcgagtactcgtctgaccacagaagcacacccgaacag
agcggccgcaagacataa
DBGET
integrated database retrieval system
