Sinocyclocheilus rhinocerous: 107741625
Help
Entry
107741625 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107741625
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107741625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
ARGLU
EKR
Motif
Other DBs
NCBI-GeneID:
107741625
NCBI-ProteinID:
XP_016409871
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MENLTPDNWREIVNKKLHFPPELIPAIQEGNTVWVDSLLSLGDGIIRQLDESEDRLWREA
LNLSIRLGSEDIMTSLLLGVKFDFRQIHEALLVAVDTNQPRFVKHLLDRLDQEKGNKMDV
RSFSMDIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLTQRGHDIPLPHSISCTCLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLSAFHLSRELRKLSKKEPEFKPQYL
ELEQLCQEFAVELLGVCRNQSEVSTILNSADDDNEDEELNEQTFEEGIPNLARLRLAVNY
NQKQWSSVREDWKQEDPQLIAETXAVTSMLSFTRLAYILPAHESLGTLQISMGRMIDNMM
RFMFILMIIGTAFLCGINNIYVPYVVSPHLGRLNDTFNFLFWTMFGMANQEYVDMPDEFV
GRIFYGIFTLLIVIVLLNMLIAMISNSFQRIEDDADVEWKFARSKLYLSYFREGLTMPVP
FNSIPSPKALFYTLRSICQKICCCCNKKAPEYPPIASLSSNTLNSSGGQGEGRVPYRLQV
TKALVHRYIEAARREFEESKRKDVGNRITELNKVVGRLHSEMQEFHQKLQWRRKSEPDQA
SILGKYIMGARNNFRDFDKNEAMGCENTGLPISTHPAQEEEDDEREGEIKREEPESEGPV
EPVPGEETSFETADTADV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccttacgccagacaactggcgggagattgtgaacaaaaagcttcactttcca
ccggagctgatccccgccatccaagagggcaacacagtctgggtggacagtctcctctcc
cttggtgacgggatcatccgtcagctggacgagtctgaggatcggttatggagggaagca
ttgaacctctccattcgactgggcagtgaagacatcatgacctcccttctgctgggtgtc
aagtttgacttccgtcagatccacgaggctctgctggtggccgtcgacaccaaccagccc
agattcgtcaaacatctcctggaccgcctggatcaggagaaaggcaacaagatggacgtt
cgttctttcagcatggacattttcgaccactccattgacgattctcaattcgcgccagga
gtgaccccactaacgttggcctgccaaaaggacctgtatgagatcgtaactatgctgacc
cagagaggccatgatattcctctgcctcactccatctcgtgcacatgcctggagtgccgt
aacggccggcaatacgacttgctcaagttctcactatcccgtataaatacgtacagaggc
atcgccagccgtgcatatctgtccatcacctcagaagacgccatgctcagcgctttccac
ctcagccgagaactgcgcaaactctctaagaaagaaccagaattcaagcctcagtacctg
gagttggaacagctctgtcaggagttcgcagtggagctgctgggagtgtgccggaaccag
agtgaggtctccaccatcctcaacagcgctgacgatgacaacgaggatgaagaacttaat
gaacagacatttgaggaaggtatccccaaccttgctcgtcttcgactggcggtcaactac
aatcaaaaacagtggagttcagtacgagaggactggaaacaggaggatcctcagctgatt
gcagagactnncgccgtgaccagcatgctgagtttcacacgtctcgcctacattctgccg
gcccatgaatccctgggaaccctgcagatatccatgggaagaatgatcgataacatgatg
aggttcatgttcatccttatgattattggaacagcatttttgtgtggaataaacaacata
tacgtcccgtatgttgtttctccacatcttggcagattgaatgatacatttaacttcctc
ttctggaccatgtttggaatggcaaaccaggaatacgtagacatgcctgatgagtttgtg
ggaaggatcttttacgggatattcacactgctcatcgtcatagtgctactcaacatgctt
attgccatgatctccaattcgtttcagaggatcgaggatgacgcagatgtcgagtggaag
tttgctcgttctaagctctacctcagttacttcagggagggtctcactatgccagttccc
tttaacagcatcccatctccaaaggctctcttctataccttgagaagcatctgccaaaag
atttgctgttgctgtaacaagaaagccccagaatatcctcccatcgcatctttgtctagc
aatactctgaatagcagcggaggtcaaggtgagggcagagtgccataccgcctgcaggtg
accaaagctctagtgcaccgctacatcgaagccgcacgcagagagtttgaagagagcaag
cgtaaagatgttgggaacagaatcactgagctgaataaagttgtcggccgactgcactcc
gagatgcaggagtttcaccagaagctgcagtggcggcgcaaaagcgagccggaccaggcc
agcatcctgggcaaatacatcatgggcgcaaggaacaatttccgtgactttgataagaat
gaggccatggggtgcgaaaacacaggtctgcccatcagtacgcatcccgctcaggaggag
gaggacgacgagagggaaggagagatcaaaagggaggagcccgagtccgagggccctgtg
gagcccgtcccaggagaagaaacttcttttgagactgctgacactgctgatgtgtga
DBGET
integrated database retrieval system
