Sinocyclocheilus rhinocerous: 107741906
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Entry
107741906 CDS
T04916
Name
(RefSeq) ATP-dependent RNA helicase DDX18-like isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107741906
03009 Ribosome biogenesis [BR:
srx03009
]
107741906
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107741906
Spliceosome [BR:
srx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107741906
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
90S particles
Helicases
107741906
Pre-60S particles
107741906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
107741906
NCBI-ProteinID:
XP_016410198
UniProt:
A0A673HI63
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MADMQMKILRKKIQKRNDKNKQRKLLRAQKEEEENGEEVKVVLDESDSAPNVSEEQQQSI
STEENETSQKIKKKKRKLDGAGDAASSVKKVKKPDVVKETTEASDGEDEKQEQECAEPEK
VPENGNNDKEGSAEEEDSDEDGPELPSGLTGAFEDKSFASLAEVVSENTLKGVKEMGFET
MTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRNGTAVVILSPTR
ELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGRLLDHLQNTPG
FMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSATQTRKVEDLARISLKK
EPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKFH
YELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYD
PPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLKQAKVPLSEFEFSWAKISDI
QSQLEKLIEKNYYLHKSAQEAYKSYVRSYDSHSLKQIYNVETLDLPKVAMSFGFKVPPFV
DLNVHSSKGVKMQKRGGGGGFGYQKSKNVHKAKIFKHVNKRKGDGRQFSR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatgcagatgaagattctccgcaagaaaattcagaagagaaatgataaaaat
aaacaacgcaaattgctcagagctcagaaggaagaagaggaaaacggtgaagaggtcaaa
gttgttctggacgaatctgattctgctccaaacgtcagtgaagagcagcagcaaagtatc
tccactgaggagaacgaaacctcacagaaaatcaagaaaaagaaaagaaaattggatggt
gcaggggacgcagcatccagtgtgaaaaaagtcaaaaagccggatgttgttaaagagaca
acagaagcatcagatggagaagatgagaaacaggagcaggaatgtgcagagcctgaaaag
gtgccagaaaatggaaataatgacaaagagggttcagcagaagaggaggatagtgatgaa
gatggaccagagcttccttctggtctcacaggtgcgtttgaggacaagtcatttgcatct
ttggcggaagtggtcagtgagaatacactgaagggagtgaaggaaatgggctttgaaacc
atgactgagatccagcacaagaccatacgacctctgctggaaggaagagacgtgttggct
gcagctaaaacaggaagcggtaaaacactagctttcctgattccctccattgagcttatc
tacaaactcaaatttatgcccagaaatgggactgcagtggtcatattgtctcccactcgt
gagttggccatgcagacgtatggtgttctaaaggagctgatgactcatcatgtgcacaca
tatggcctcatcatgggcggcagcaaccgttctgctgaagcccagaaactcgccaatgga
gtcaatatcctggttgctacacctggcagacttctcgatcacctgcagaacacacccggg
ttcatgtttaagaaccttcagtgtctgatcattgacgaggctgataggattctagaggtt
ggctttgaggaagaactgaagcagatcatcaaactactgcctaaaaaaagacagaccatg
ttattttccgcaacacagacacgtaaggtggaggatcttgcacgaatctccctcaagaag
gagccgttgtatgtgggggtggacgacaacaaagacacggccaccgtggaagggctagaa
cagggatatgtcgtatgtccttcggaaaaacgtttcctgctgctcttcacgtttctgaag
aagaaccgcaagaagaagctgatggtgtttttctcgtcttgcatgtctgtgaagttccac
tatgagctgctcaattacatcgatctgcccgtcatggccattcacgggaagcagaaacag
acgaagagaaccacaacgtttttccagttctgtaacgcagactctggtattctcctctgt
acggatgtggctgccagaggtctcgatatcccagaggtggactggattgttcagtacgac
ccacccgatgatccaaaggagtacattcaccgtgtgggacgaacagctcgtggtattaat
ggtagaggacatgccctcctgatcctaagaccggaggagctcggctttttacgatttctc
aaacaggccaaagtccctctgagtgagtttgagttctcctgggctaaaatctctgatatt
caatctcagttggagaagctgatagagaagaactactaccttcacaaatcagctcaggag
gcctacaaatcctacgtcagatcttatgactcgcattccctcaaacaaatctataatgta
gagacactcgacctcccgaaagtggcaatgtcctttgggtttaaagtgccaccttttgtg
gacctcaatgttcacagcagtaaaggggtgaagatgcagaagcgaggtggcggcggaggc
tttggctaccagaaatctaagaacgtccacaaggccaagatcttcaaacacgtcaacaaa
aggaaaggagatggtagacagttctcacgctga
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