Sinocyclocheilus rhinocerous: 107741962
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Entry
107741962 CDS
T04916
Name
(RefSeq) retinoic acid receptor RXR-alpha-A-like
KO
K08524
retinoid X receptor alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03320
PPAR signaling pathway
srx04148
Efferocytosis
srx04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107741962
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107741962
03320 PPAR signaling pathway
107741962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107741962
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
srx03310
]
107741962
Transcription factors [BR:
srx03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107741962
Nuclear receptors [BR:
srx03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107741962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107741962
NCBI-ProteinID:
XP_016410269
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MDPFCLDIHMGFLKPHCSIPPPPQRGRAEACTCFSGMCALHQRRLSTDCSGQMTSSPLSS
PTSHRGMHPSLLSPTSLGHSGSLHSPISTLSSPMNGLGSPFSVISSPMGPHSMASPGMGY
GPSISPQLNSPMNSVSSSEDIKPPLGINGVMKVPVQPLGTPLSLSKHICAICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCIIDKRQRNRCQYCRYQKCLAMGMKREVLL
HTAVQEERQRAKDRNENEVESTSSVNEDMPVEKILEAELAVEPKTETYIETNVPMPSNSV
SDISSSFCSEKPGEKPTPGWNELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAI
FDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASLEAYCK
QKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatcccttctgccttgatatacacatggggttcctgaaaccccattgctcgatacca
ccgccacctcagagaggacgagcagaagcatgcacgtgtttcagcggaatgtgtgctctt
catcaacgcaggctttctacagactgctcgggacagatgacgtcctctcctctcagctct
cccacatcccaccgggggatgcacccatcactgctgagcccgacttctttaggccactca
gggtctctgcactcccccatcagcactctgagctcacccatgaacggcctgggctctccc
ttctctgtcatcagctcacccatggggccacattccatggcgtcacccgggatgggctac
ggccccagcatcagcccacagctgaactcgcccatgaactctgtcagcagctcagaagat
atcaagccgcccctgggcatcaacggtgtgatgaaggtgccagtccagcccttgggcacc
cccctctccctctccaaacacatctgtgccatctgcggcgaccgctcctcaggtaaacac
tacggtgtgtacagctgcgaggggtgcaagggtttcttcaagaggactgtgcgtaaggac
ctgacttacacttgtcgagacagcaaggactgtattatcgacaaacgccagcgcaaccgc
tgccagtactgccgctatcagaagtgtttggccatgggaatgaagagagaagtgttgtta
catacagccgtccaggaggagcgccagcgagccaaggaccgcaacgagaacgaggtggag
tcaaccagcagtgtgaacgaagacatgcctgtggagaagatcttggaggcggagcttgct
gtggagcccaagacggagacttacattgaaaccaatgtaccaatgccctcgaattcagta
agtgacatctcttcctctttttgctctgaaaagcctggggaaaaacccaccccaggatgg
aatgagctcctcattgcgtcattttcacaccgttcaatatcagtgaaagatgggatactg
ttggccacaggattgcatgtgcaccggaacagcgcccacagcgccggagtaggagccata
tttgacagggtgctgacggaattggtgtcaaagatgagagacatgcagatggataaaaca
gagctagggtgccttcgagccatcgtcctcttcaacccagactccaaaggcctgtcaaac
ccaggtgaggtggaggcgctgagagagaaggtctatgcctctctggaagcctactgcaaa
cagaagtaccctgaacaacctggaaggtttgctaagttgttgctgcggctccctgccctg
cgttccattggactgaaatgtttggagcatctgttcttcttcaagctcataggagacaca
cccatcgataccttcctcatggagatgctagaggcgccccaccaaatgacataa
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