Sinocyclocheilus rhinocerous: 107741968
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Entry
107741968 CDS
T04916
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107741968
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107741968
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107741968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Pacs-1
Motif
Other DBs
NCBI-GeneID:
107741968
NCBI-ProteinID:
XP_016410280
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MGCNLCSLQKREEHYKLLYEISQVNGRDLSRASHEEAAEALRSAKDPIVVQVLRRTPRPR
GQGSAQDVQLVDVCTQTEITFEHIMALAKLRPATPPVPDICPFLLSDSCLSLHTMDQEYL
EGSEYLSNMAADAERTDDFEYEEVELRRLSCQEKLGLTLCYRTDEDEDIYVSEIELNSIA
ARDGRIREGDRILQINGRDVQDRQEAVAVLSNEECRNIVLLVARPEIQDEPWLDDEHSEY
LEELKMEMLEEEEEEMKRATREEDQKARATQEESITASCSYSQDPERSVLAQIQKQLSQC
VSGRSSADGAEKLLELKCQIRSGGEYDLFYARSSIQCSGVERELRMLNEELRSIQLECQS
IMKVHQLGSRERPEKSDKDSSSAYNTAESSRSTPLAADRSPEHRRVSLTNRRNLLALRRA
PSGSPDHSNPSESEQTPPEGPQRQSCMQLIQQQTALEFVSRPSEPKMEWKVKVRSDGTSC
RCWERALKIKEERSGGMTTDDDAMSEMKMGRYWSKEQRKQHLLRAKEQRRRREFMQRSRL
ESLRENPLSSGEGRSEPSIIELSHRKMMKKRNKKILDNWMTIQELMTHGEKAPEGSAVHN
AFLSVTTV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgtagtttacagaagagagaggagcattacaaactactgtacgag
atctcacaggtgaacgggagggatctgtcgagagccagtcatgaggaggcggcggaggct
ttacgcagcgctaaagaccccatcgtggtgcaggtgctccggcggacccctcggccccgg
ggtcaagggtcagcgcaggacgtccagctggtggacgtgtgcacacagacggagatcacc
ttcgagcacatcatggctttggccaaactgcgtcccgccacgccgccggtgccggacatc
tgccccttcctcctgtccgacagctgtctctctctgcacacgatggatcaggaatacttg
gagggcagcgagtatctctccaacatggcagcggacgccgagaggaccgatgactttgag
tacgaggaggttgagctgcgtcgactgagctgtcaggagaagctggggctcacgctgtgc
tacaggacagacgaggacgaggacatctacgtcagcgagatcgagctgaacagcatcgct
gcgcgagacggtcgaatccgagaaggagaccgtattttacagataaatgggcgggacgtt
caggacagacaggaagcggtggcggttctctcgaatgaagaatgcaggaatattgtgctg
ctggtcgcaaggccggaaatacaggatgagccgtggctggatgacgagcacagcgaatac
ttagaggagctgaagatggagatgctggaggaggaggaggaggagatgaagagagcgact
cgagaggaagaccagaaggccagagcaactcaagaagaaagcatcacggcgtcctgctcc
tacagtcaggacccagagaggagcgtccttgctcagatccagaagcagctgtcgcagtgc
gtgtcgggccggagctcagcggacggagcggagaagctgctggagctgaagtgtcagatc
cgcagcggcggcgagtacgacctgttctacgcacgcagcagcatccagtgcagcggtgtg
gagcgcgagctgcggatgctgaacgaggagctgcgcagcatccagctggagtgccagagc
atcatgaaggtgcatcagctgggatcccgcgagcgtcccgagaagtcagacaaggacagc
tcgagcgcgtataacacggccgagagctcgcgcagcacgccgctcgccgcagatcgctct
ccggagcaccgcagggtcagcctgaccaaccgcaggaacctgctagcgctccgacgggcc
ccaagcggcagccccgaccacagcaacccatccgagtccgagcagacgccgcccgagggc
ccacagcgccagagctgcatgcagctgatccagcagcagacggcgctggagttcgtcagc
cggccttctgaacccaagatggagtggaaggtgaaggtccggagcgacggaaccagctgc
cgctgctgggagcgagcgctcaagatcaaggaggagcgcagcggcggcatgacgactgat
gacgatgccatgagcgagatgaagatgggacgctactggagcaaggagcagcgcaagcag
cacctcctgcgggccaaggagcagcggcggcggcgcgagttcatgcagcggagccggctg
gagagtctgcgggagaatccactcagcagcggagagggacgctcggagcccagcatcatc
gagctcagccaccgcaagatgatgaagaagaggaacaagaagatcctggacaactggatg
accattcaggagctgatgacacacggagagaaagcgcctgagggatccgcagtccacaac
gcctttctgtctgtcactactgtatag
DBGET
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