Sinocyclocheilus rhinocerous: 107742131
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Entry
107742131 CDS
T04916
Name
(RefSeq) sonic hedgehog protein A isoform X1
KO
K11988
sonic hedgehog
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107742131
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srx01002
]
107742131
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107742131
Peptidases and inhibitors [BR:
srx01002
]
Cysteine peptidases
Family C46: hedgehog family
107742131
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Morphogens
107742131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
107742131
NCBI-ProteinID:
XP_016410518
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MRLITRVLLVSLLSLSLVVSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSLVSLKDGGQKAVKDLNPGDKVLAADGDGKLVYSDFIV
FTDRDSATRRVFYVIETKEPVEKITLTAAHLLFVLDNSTDDRHTMTAAFASSVRAGQKVM
VVDDSGQLKSVIVERIYTEEHQGSFAPVTAHGTIVVDRILASCYAVIEDHSLAHLSFAPV
RLYHSVSSALFPKNFISQSNATLQQEGVHWYSKLLYQMGTWLLDSRMLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttattacgagagtgctgctggtgtcacttctcagtctgtccttggtggtgtcc
ggactggcctgcggtcctggcagaggctacggcagaagaagacatccgaagaagctgaca
cctctcgcctacaagcagtttatacctaatgtcgcggagaagaccttaggggccagcggc
agatacgagggcaagataacgcgcaattcggagagatttaaagaacttactccaaattac
aatcccgacattatctttaaggatgaggagaacacgggcgcggacagactcatgacacag
agatgcaaagacaagctgaactcactggccatctctgtaatgaaccagtggccaggggtt
aagctgcgtgtaacagagggctgggatgaggacggtcaccattttgaagaatcactccac
tacgagggaagagctgttgatatcaccacctctgatcgagacaagagcaaatatgggaca
ctctctcggttagctgtggaagctggatttgactgggtctattacgagtccaaagcccac
atccattgctctgtcaaagcagaaaattcggttgcggcgaaatctggaggctgcttccca
ggttcgtctctggtctcgctcaaagacgggggacagaaggccgtgaaggacctgaaccca
ggtgacaaggtgctggcggcggacggcgatgggaagctcgtgtacagcgacttcatcgtg
ttcacagaccgagactccgcgacgcgacgcgtgttttacgtgatcgaaactaaagaaccc
gttgaaaagatcaccctcaccgctgctcacctcctttttgtcctcgacaactcaacggat
gatcggcacaccatgaccgccgcgtttgccagcagtgtcagagccggacaaaaggtgatg
gttgttgatgatagcggtcagcttaaatctgtcatcgtggagcggatatacacggaggag
caccagggctctttcgcaccagtgactgctcatgggaccattgtggtcgacagaatactg
gcgtcctgttacgccgtaatagaggaccacagtctggcgcatttgtccttcgcgcccgtc
aggctctatcatagcgtgtcatcggccctgttccccaaaaacttcatcagtcagtctaat
gcgactttacaacaggagggagtccactggtactccaagcttctgtatcaaatgggaacg
tggcttttggacagccgcatgcttcatcctttggggatgtcagtaaactcaagctga
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