Sinocyclocheilus rhinocerous: 107742278
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Entry
107742278 CDS
T04916
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
srx03015
mRNA surveillance pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107742278
09122 Translation
03013 Nucleocytoplasmic transport
107742278
03015 mRNA surveillance pathway
107742278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107742278
03041 Spliceosome [BR:
srx03041
]
107742278
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107742278
Spliceosome [BR:
srx03041
]
Complex C
Other components
EJC/TREX
107742278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
107742278
NCBI-ProteinID:
XP_016410659
UniProt:
A0A673JQ20
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKAALEQRGLAKSGQKNALIKRLKGALMLENLQRTSTHQ
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADETQSPAGPEEDEHMP
TKDSTSFLPEKHHFVHSHLSATQAGGGGLPQDPGLLGSHRLDTGPVPVSQESPDTKAGRI
WHPSFLPGHEEVATPSPPRAVASLSVRVVGQPERQGLPLMMPRAQEREGTAPIEAGPAHS
VLQLSRSARAAACAQVDSDDNDEDDDDDDEWGPTSHGKKNVRAPPIHTPPAAAPQRSRRK
LQPPQHIPPQPQPVHQPPLQLRQPTPPPSPPPEMSFPLPDTPKQSPQDQDEAAGLAEGAA
SGADVVSPPSLKRQESSSSCRSSSPEPPSTRRPGPLSLLVRKMESEGVFDGAQKAGMEGE
GEMEVEEQGDGEAEVQDSAQQLLGSEVSVSVPTAQQDAQDSELKEERDKQKRIEEKEYEN
VDETSAPFHLTSPTTFSARRPHIFSEVPPPDSLTSSSKPEQVSVLTSVPKCSEDVAMEAE
ASTTTPESKHEEEKEVKVLEKEPPKTAEESEKSLKSAHSTSEEGEMGETRYLSRREKGHE
RRSSMPSQSSSSDTDSESSSSHTSSSPSQDKSSPPSQKKDEEENKRDYVKEKKAQSSREV
KQEALSEPAGQVAMELEGRSHSESAMQQPDHQGADSSDTRPEESSTVKSFAARKISLSSK
TEIASSEVEPVGGASRKRRWGSSTAVTAKKPSISITTESLKTLIPDIKPLQEAVVELHPD
EGRLSGDEDSSGPREREEPEEDQGLKIRRTVTQIVPSDGHENGQKEIKEEEEEDEEEQKW
TKGETEKQRKRENSPDVTMEIQEGESKKVTPNDSLVRRSISQQKSGVSITIDDPIRTGRQ
LSPPRGKTSHIIHVCNLVRPFTLGQLKELLNRMGTLVEEGFWIDKIKSHCYVTYSTIEEA
VATREALHGVKWPTSNPKVLRVDFCEQYELDFHKGLVSSERAGVGHDPHASGTSARPATH
HPLPPANHEKEKERERARDGGAAAVRDQWAERERAMERRERTRSEREWDRDKVKDFGKDD
GDRTRKSRSRDRRRRERGKSKEKRTAKKDKPEEPPVKLLDDLFHKTKAAPCIYWLPLTEE
QATQRALERAERIKEREKRRKELQEEEDKKQEERRERAKGRDREGGNAGGAGVVRPSTEG
ERDRGKEREREKGKEAENRRDGHRGRGSDSKTAGGSRRSQSRSISSRDRRH
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaggatgttacgttagacggcaaaccgcttcattcgcttcgtgtggcg
gatttaaaagccgccctggagcaaagagggctcgccaaaagtggacagaaaaatgcactc
attaaacggctgaaaggggctctaatgttggagaatctccaacgaacatctacccatcaa
attggtcttcagcccaattctcagattggagaggagatgagtcagaacagctttataaag
cagtacctggccaaacagcaggagctcctccgacagagactggagagagaagcccgggag
gccactgaggcagatgagacacagagtcctgctggtcctgaggaggatgaacacatgcca
accaaagatagcacttcctttctaccagagaaacatcacttcgtacactctcatctgtct
gcaacccaggcaggcggaggagggttgccacaggaccctgggttattgggatcgcacagg
ttggatacaggccctgttccagtgtctcaagaatcacctgacactaaagctgggaggatc
tggcatccttctttccttcccggccatgaggaggtcgcaacaccctctcctccacgtgca
gttgcctccttgtctgtgcgcgtggttggacaacctgagcgtcaaggcttgcctctcatg
atgccccgtgcccaagagagagagggaacggccccgatcgaagcaggtcctgcccattcg
gtgttgcagctcagccgttccgcgagggccgcagcttgtgctcaagttgatagcgatgac
aatgatgaggatgatgatgacgatgatgaatggggtcctacctcacatgggaaaaagaac
gtccgggctcctcctatacacactccaccagctgcagccccccaacgatcccgtagaaag
cttcaaccaccacagcacatccctcctcagcctcagccagtccaccagccacctctgcag
ctccgtcaacctactcctcccccatctccacctccagagatgtctttcccgctacctgac
actcccaaacagagcccacaggaccaagatgaggcagcaggcctagcagaaggtgctgct
tcaggggcagacgtggtctctccgccatccctcaaaagacaggagtccagctccagttgt
agatccagcagcccagaacccccatccacacgcagacctggtccacttagcctgctggtc
cgcaaaatggaatcggagggtgtgtttgatggtgcacagaaggcagggatggagggagaa
ggagagatggaagttgaagagcagggggatggtgaagcagaagtgcaagactccgctcag
cagcttctcgggtcagaggtgtctgtgtcagtacccactgctcaacaagatgctcaagac
tctgagttgaaggaggagagagataagcaaaaaagaattgaggaaaaagaatatgagaac
gtggatgagacttctgcaccattccatttgacttcacccaccactttctcagctagaagg
ccgcacattttctcagaggtcccaccacctgattcacttacatcatcctccaaacctgaa
caggtgtcagtgctcacatcagtgccgaagtgctctgaagatgttgctatggaggcagag
gcctctacaacgacacctgaatcaaaacacgaggaagagaaagaagtgaaagttctagag
aaagagccacctaaaacagcagaagaaagtgaaaagtctttaaaatcggcacactctaca
tctgaagaaggagaaatgggtgaaacaagatacctttcacggagagagaaaggtcatgaa
cgacgctcgtcaatgccaagtcagtcatcatcatctgacaccgattcagaatcatcatct
tctcatacttcaagctctccttcacaggataaatccagcccacccagccaaaagaaggac
gaggaagaaaacaaaagagattatgttaaagaaaaaaaggctcaatcttcaagggaggta
aagcaggaagctctctctgagcctgcaggccaagttgccatggaactggagggccgctct
cattcagagagtgctatgcaacagcctgaccaccagggggcagattccagcgacacccgc
ccagaggagagctccactgtaaaatcgtttgctgcccgcaagatctccctgagcagtaaa
acggagattgcgtcatctgaggtagagcctgtgggtggagccagcaggaaaagaaggtgg
ggttctagtacagcagtcactgccaagaagccgtcaatcagcatcaccactgaatcgctg
aagacgctaattccagacatcaagcccctacaggaggcggttgtcgagctgcacccagat
gaggggcgtctctctggggatgaggactcatctgggcctcgtgagcgagaggaaccggag
gaggatcagggtctcaagatcagacgcacagtgacacagattgtcccatctgatggacac
gagaatgggcagaaagaaataaaggaagaagaggaggaggatgaagaagagcagaagtgg
actaaaggagagacagaaaaacaaaggaaacgggagaactcccctgacgttacaatggaa
atacaggagggcgagtccaaaaaagtcactcccaatgattctttggtgcgacgctccatc
agtcagcagaaatcaggtgtgtccataactattgatgaccctatacggacgggtcgccag
ctctctcctcctcgtggaaaaacctcccacatcatacacgtctgcaacctggtgcgacct
ttcaccttagggcagctgaaggagttgttaaatcggatgggtacattggtggaggagggt
ttctggatcgacaagatcaaatctcactgctatgtcacatactccactatagaggaagct
gtggccactcgagaagcactgcatggtgtgaaatggcccacaagtaatcccaaagtacta
cgtgtggatttttgtgagcaatatgagttggacttccataaaggtctcgtgtccagtgag
cgtgcaggtgtaggtcatgaccctcacgcctcaggaacctcagcccgccctgccacccat
cacccactgccacctgcaaaccacgaaaaagagaaggaacgagagagagcgcgagacgga
ggagctgcagccgtgagagaccagtgggcagagagggaaagagcgatggagaggagagag
aggactcgttctgagcgggagtgggaccgggataaagtcaaggactttgggaaggatgac
ggagaccgaacgaggaagtcgcgatcacgggaccgaagacgcagagagcgaggcaagagc
aaagagaagagaacggcgaagaaagataaaccagaagagcctcctgtaaaacttcttgat
gacctgttccacaaaactaaagcagctccctgtatatactggttacccctcacagaagaa
caggcgacacaaagagctctggagcgtgctgagcgcataaaggagcgagagaagaggagg
aaggaactccaggaggaagaggacaaaaaacaagaagaacggagagagcgagcaaaaggc
cgtgacagagagggagggaacgcaggaggagcaggtgttgtgagaccttcaactgaggga
gagagagacagagggaaggaaagagagcgagagaagggcaaggaggcagaaaataggaga
gatggccacagaggccgcggtagcgactccaaaaccgcagggggcagcagacgctcacag
agccgtagcatctcctccagagacagacgacactga
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