Sinocyclocheilus rhinocerous: 107742492
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Entry
107742492 CDS
T04916
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107742492
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107742492
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107742492
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107742492
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107742492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
107742492
NCBI-ProteinID:
XP_016410955
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MGSRSIGAVHSARCYLVLILQLLTQLPRANSVLRYRVAEEGPADVHIGNVASDLGLSTSG
IGTGDVTFALESGSEYFKIDNVTGELTTGSKRIDREKLPQCQMIFDENECFLNFEVSVIG
PLQSWVDLFDGRIVVTDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGID
RYELIQDSRDGGSSLRRPANGPTNGNGGDRRRVSETGAGPASRSSVFELQVADTPEGQKQ
PQLIVKGPLDREARDSYELVLRVGDGGNPPRSSQALLRVSITDVNDNSPRFERAVYEAEM
PENTPPGTPVLQVRAADRDVGVNGQVEYVFGAATESVRRLLRLDEASGWLSVLHRIDREE
VSQLRFTITARDRGQPPRTDRTTVVLNVRDENDNVPIVEIRKIGRILVRDGAAMVPENVL
VDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALAPPPATDDAFERNKKKYFL
HTSALLDYEATREYSVTIVAVDSGSPSLSSNSSLLVRVVDINDHAPTFAQSLVEVHFAEN
NAPGERVVTVVATDADSGKNAEIAYSLDPSVNGAFYIDADHGDIRATGALDREQRERYEF
RVIARDKGTPSLQGSATVIVQVTDRNDNAPKFVQEVFTFYVKENLLTNSPVGMVTVTDAD
EGENAELSLFVEHDEEEGGEEGKEGKQEVFSIENNTGTIFSSASFDRERRSTYSFRVRAV
DGGEPPRSATATISLFVTDENDNAPSITSPANESYTLLPPASGARTVVRTVSASDGDTGS
NADLRYALVGGNPFSLFEIGSSSGVITLAEPLERRHRGLHRLVVRVNDSGVPSLCATALV
HVFINESLANATLVDAQVARSLAVPLYMDIAGDPDSERALGKQRLSVAIGVLAGAAAVIL
VILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPQPPPLLAQGSQNERGRKPRRDKRNNGT
AKSERSLYSGIMTVNGCRRGGGDEEEEDEDVSSASERIAARYCAAANGDPSSPRLGSRHH
QSSPDLARHYKSSSPLPAVHLQPNSPPVEGKKHQAVQELPPTNTFTGNGTGNADAMSLSS
DQCSDYGCQTVKYSKQPLRRVTFSVVSQAPDQGCYDSGVEDSETPSSKSSSGPRLGSLPL
PEDGYERTTPEGSVGEEEHVENDPRQLPDVALTGKCTRECDEFGHSDTCWMPVQPSPRRR
MEPPQLSTFASPGDNNNNTEDDSDREEDGDGGTDKSSGGSEEVQDSLANGDPLGTLSRRD
RNRNMGDHNRNLLNRKMTSASYDTFSSAGFGRRPDEEDSHPPEVIPLTRTGGDYKTTSCL
TLSRREVYL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaggagcattggcgcagtgcactctgcgcgctgctacctcgtgcttatcctg
cagctgctgactcagctcccgcgcgccaattcagtgctgcgctaccgcgtggcagaagag
gggccggccgatgtgcatattgggaacgtggcttcagacctggggctgtccacctctggg
atcgggacaggtgatgtcactttcgctttggaatctggctcagaatacttcaaaattgac
aacgtcactggagagcttactacaggcagcaagaggattgacagagagaagctgccgcag
tgtcagatgatatttgatgaaaacgagtgctttttgaactttgaggtgtcagtcataggt
cccctacagagttgggtggatctgtttgatggccgtattgtagtcacagacatcaatgac
aacaccccctcttttccttcaccagtactcacactgtctgttgaggagaatcggccaatc
ggcacactctatctccttcccacagccacagaccgtgattttggtcgtaatggcattgat
cgctatgagcttatccaggacagtagagatgggggatcatctttgcggcggcctgcgaac
ggaccgaccaatgggaacggtggtgaccgaaggagagtgtcagaaacaggggcaggacct
gccagcagaagcagcgtgtttgaacttcaagttgccgacacacctgaaggacagaaacag
ccccagctgatcgtgaaagggcctctggaccgcgaagcacgagattcttatgaactcgtg
ctacgggttggtgatggcggcaaccctccccgctcctcacaagctctgttacgagtgtcc
atcacagacgtcaacgacaacagtccacggtttgagagagccgtgtatgaagcagaaatg
ccagaaaacaccccacctggcacacctgtcctgcaggtgcgtgccgcagaccgtgatgtc
ggcgtgaacgggcaggttgagtatgtgtttggagcagcgacggaatcagtgaggcgtctt
ctgaggttggatgaagcatcaggttggctgagcgttctgcatcgcatagaccgcgaggaa
gtttcgcagctacgcttcaccatcacagctcgtgaccgcggccaaccacctcgcactgac
cgcactacagtcgttctcaacgtaagggatgaaaatgacaacgtacccattgtggaaatt
cgaaaaattggacgaatccttgttcgggatggcgctgcaatggttccagagaacgtgttg
gtggacactccagtagcattagtgcaggtgtcagaccgcgaccagggagagaatggtgcg
gttacctgcactgtggttggggatgtgccatttacgttgaaaccggcgggtgagacagcc
ctagcacctccaccagccacggatgatgcatttgaacgaaacaaaaagaaatattttctc
cacacctcagcacttttggattacgaagctactcgtgagtatagtgtcactatcgtggca
gtggactccggtagcccaagcctctctagtaatagttcccttctggtacgtgtggtggac
atcaatgaccatgctcccacttttgcccagagcttagtggaagtgcattttgcagagaat
aatgccccaggagaacgagtggtcacagtagtggctactgatgcagacagtggtaagaat
gcagagatcgcatactcactggacccatctgttaatggagctttttacattgatgccgat
catggtgatattcgtgccactggggcactagatagagagcagagggaacgctatgaattt
cgtgtgatagctcgagataagggcaccccgtctctgcaaggctctgctactgtcatagtt
caggtcacagacaggaacgacaatgcccccaaatttgtccaggaagtcttcacattctac
gtcaaagagaacctgctcaccaatagccccgtcggcatggtgactgttactgatgcagat
gaaggcgagaatgcagagttgagtctttttgttgagcacgatgaagaggagggtggagag
gagggcaaagaggggaagcaagaagttttctccattgaaaataacactggaaccattttc
tcctctgcatcatttgaccgcgaacgacgtagtacatactcattccgcgtgcgtgctgtt
gatggtggagaaccgccacggtctgccaccgccaccatctccctgtttgtcactgatgaa
aatgacaacgcgccatccatcacatcacccgctaatgaatcatacacccttctgccaccc
gctagcggagctcggactgtagtccgcacagtctcagcctccgatggcgacacagggtct
aatgccgatctccgctacgctctggtaggtggaaacccttttagtctgtttgagattggc
tcgagtagtggggtcataaccttggcagagcccctggagagaagacacaggggtctgcac
cgcttggtggtccgggtcaatgacagtggcgtgccttccctttgtgccacggcactggtg
catgtcttcatcaacgagagcttggccaatgctacgctggtggatgcacaggtggcccgc
agccttgcagtccccctctatatggatattgcaggtgacccagacagcgagagagctttg
ggtaaacaacgcctgagcgttgccatcggtgtcctggctggtgctgctgccgttattctg
gtgatccttctggttgtgacagcacgacagtgtggggcacagggtaagaatggctatgag
gctgggaagaaggagccagaagaggactttttcagtccacaacctccccctctgctagcc
cagggctcccaaaatgaacgtgggcgcaaaccccgcagagacaagcgtaataacggtact
gccaaatctgagcgttctttatacagtggaattatgacggtgaatggctgcagacgtggg
ggaggcgatgaagaagaggaggatgaagatgttagcagtgccagcgagaggattgcagca
cgttattgtgcagcagctaacggagacccaagcagtccaagactaggctcaagacatcac
caatcaagtccagatctggcacgccactacaagtccagctcacctttgcctgcagtgcat
cttcagcccaactcaccacccgtggaaggcaagaagcaccaagctgtgcaggaactgccc
cccactaacaccttcactggcaacggcaccggtaatgcagacgccatgtcactcagctca
gaccagtgctccgattacggctgccaaactgtcaagtacagcaaacagcccctcagaaga
gtgacattttctgtggtgagtcaggctcctgatcaaggctgctatgatagtggagtggag
gactctgagaccccaagcagcaagagttcctctggacccagactgggatcgttaccgctg
cctgaggatggatatgaaaggacaacaccagaagggagcgtaggcgaagaggagcatgtg
gaaaatgaccccaggcagctccctgacgtggctctgacaggaaagtgcacacgagaatgt
gatgagtttggtcactctgacacctgctggatgcctgtgcaaccatcaccacgcagacgc
atggaaccaccccaactgtccaccttcgcctcgcccggcgataacaacaacaacacggag
gacgacagcgaccgagaggaagacggagatggaggtacggataagagcagcggaggaagc
gaggaggtccaggattcgctcgcaaatggagatccgctcggaacgctcagccgtcgggac
cggaacaggaacatgggcgaccacaaccgtaatctcctgaaccggaaaatgacctcggca
tcctatgacacgttcagcagcgccggctttggccgtcgtccggatgaagaagactcacac
cccccagaggtcattccgcttacgaggacggggggcgactataagaccacttcgtgcctc
actctgtctcgcagggaagtgtacctgtga
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