Sinocyclocheilus rhinocerous: 107742841
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Entry
107742841 CDS
T04916
Name
(RefSeq) syndecan-3-like
KO
K16337
syndecan 3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04514
Cell adhesion molecule (CAM) interaction
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107742841
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107742841
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
srx00535
]
107742841
Proteoglycans [BR:
srx00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
107742841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
BPD_transp_2
DksA_N
SDH8
Motif
Other DBs
NCBI-GeneID:
107742841
NCBI-ProteinID:
XP_016411387
UniProt:
A0A673LHT3
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MKLPCWMALALLLLAQTALAQRRISRPSDDESSGDEFYDDEDLFSGSGSGFPDMDVSPTA
AGVAVTTEETLPLSTTQATGPAPSASPAAEPSSPPPPEVERESGLGQDVDGDSKLEMEIE
KKWEELEEEEMRRSKEQDREQESEIVIRLDADKVQDGEEEQERSKATVAPRLTDVPVVFV
DSSTTLSETTVATSDPEDRATTEEEEDLYITTETIMLEPSSTPETTADDITTTEVIPTTV
ESTTAKPTRPRPAPTTPSTAPVRPRKPHTTPSRAAPTESSTRSVMTTTQTQAPDETVNNE
VAGPSPSGDFEIRENEGRQGNEVGRGKGATGVAGEPDLTGNTVDAAGSSAAQLPQKNILE
RKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDRQEE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcccgtgctggatggcgcttgcgctgctgctgctggcgcagactgcactggcg
cagcgtcgcatatctcgaccaagcgatgatgagagttctggagatgaattttacgacgat
gaggacttattctctggatccggctctggctttccagatatggatgttagtccaactgca
gcaggtgtggctgtcactacagaagagaccctcccactttctaccacacaggccactggc
cccgctccttcagcctcccccgccgcagagccgagtagcccacctccacctgaggtagaa
cgtgagagtggcttgggacaagatgttgacggagacagcaaattggagatggagattgag
aaaaagtgggaggagcttgaggaagaggaaatgagacggtcgaaggaacaggatagagaa
caggaatctgagatcgtaataaggttggatgctgataaagtgcaagacggagaggaggaa
caagagaggtccaaagctacggttgccccccggctgactgatgttcctgtagtgttcgtg
gactcatctaccacactgagtgagactacagtggccactagtgacccggaggaccgcgcc
accacagaagaagaggaggatctatacattactacagaaaccatcatgttagagccatct
agcacaccggagacaacagcagatgacatcacaaccactgaggtcatccccaccaccgtt
gagtccacaactgctaagccaaccagaccacgtcctgccccgaccactccgagcactgcc
cccgtgcgcccccggaaaccacacactacccccagtagagccgcccccactgagagcagc
actcgttcagtgatgaccacaacacagacacaagcaccagatgaaactgtaaataatgaa
gttgcaggaccaagtccaagtggtgattttgaaatccgcgagaatgaaggtcgccaaggc
aacgaggtcgggagaggcaaaggggcgactggcgtggcaggagaaccagatctgactggt
aacacagtagatgctgctggaagctcagccgctcaacttccacagaagaacatccttgag
aggaaggaagttttgatagcggtgattgtcggaggtgtagttggagcactctttgcagca
ttcctcgtaatgttactcgtctaccggatgaaaaagaaagatgaaggcagctacacattg
gaggagcctaaacaagccaccgtcacctaccagaaaccagacaggcaggaagaatga
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